What causes hyperfluorescence: Folding intermediates or conformationally flexible native states?

John Ervin, Edgar Larios, Szabolcs Osváth, Klaus Schulten, Martin Gruebele

Research output: Contribution to journalArticle

Abstract

Hyperfluorescent intensity maxima during protein unfolding titrations are often taken as a sign for a thermodynamic folding intermediate. Here we explore another possibility: that hyperfluorescence could be the signature of a "pretransition" conformationally loosened native state. To model such native states, we study mutants of a fluorescent ubiquitin variant, placing cavities at various distances from the tryptophan fluorophore. We examine the correlation between protein flexibility and enhanced fluorescence intensity by using circular dichroism, fluorescence intensity unfolding titrations, fluorescence anisotropy measurements, and molecular dynamics. Based on experiment and simulation, we propose a simple model for hyperfluorescence in terms of static and dynamic conformational properties of the native state during unfolding. Apomyoglobin denaturant unfolding and phosphoglycerate kinase cold denaturation are discussed as examples. Our results do not preclude the existence of thermodynamic intermediates but do raise caution that by itself, hyperfluorescence during unfolding titrations is not conclusive proof of thermodynamic folding intermediates.

Original languageEnglish (US)
Pages (from-to)473-483
Number of pages11
JournalBiophysical journal
Volume83
Issue number1
DOIs
StatePublished - 2002

ASJC Scopus subject areas

  • Biophysics

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