TY - JOUR
T1 - Toward reproducible and interoperable environmental modeling
T2 - Integration of HydroShare with server-side methods for exposing large-extent spatial datasets to models
AU - Choi, Young Don
AU - Maghami, Iman
AU - Goodall, Jonathan L.
AU - Band, Lawrence
AU - Nassar, Ayman
AU - Lin, Laurence
AU - Saby, Linnea
AU - Li, Zhiyu
AU - Wang, Shaowen
AU - Calloway, Chris
AU - Yi, Hong
AU - Seul, Martin
AU - Ames, Daniel P.
AU - Tarboton, David G.
N1 - We thank Natalie Thompson and the consultants of the University of Virginia Graduate Writing Lab for their helpful feedback in preparing the manuscript. We also thank the University of Virginia's High-Performance Computing system, Rivanna, for providing extensive computational resources used in the development of our workflows.This material is based upon work supported by the U.S. National Science Foundation (NSF) under awards 1664018, 1664061, 1664119, 1849458, and 2118329. Any opinions, findings, conclusions, or recommendations expressed in this material are those of the authors and do not necessarily reflect the views of the NSF.
We thank Natalie Thompson and the consultants of the University of Virginia Graduate Writing Lab for their helpful feedback in preparing the manuscript. This material is based upon work supported by the U.S. National Science Foundation (NSF) under awards 1664018, 1664061, 1664119, 1849458, and 2118329. Any opinions, findings, conclusions, or recommendations expressed in this material are those of the authors and do not necessarily reflect the views of the NSF.
PY - 2025/1
Y1 - 2025/1
N2 - Reproducible environmental modelling often relies on spatial datasets as inputs, typically manually subset for specific areas. Yet, models can benefit from a data distribution approach facilitated by online repositories, and automating processes to foster reproducibility. This study introduces a method leveraging diverse state-scale spatial datasets to create cohesive packages for GIS-based environmental modelling. These datasets were generated and shared via GeoServer and THREDDS Data Server connected to HydroShare, contrasting with conventional distribution methods. Using the Regional Hydro-Ecologic Simulation System (RHESSys) across three U.S. catchment-scale watersheds, we demonstrate minimal errors in spatial inputs and model streamflow outputs compared to traditional approaches. This spatial data-sharing method facilitates consistent model creation, fostering reproducibility. Its broader impact allows scientists to tailor the method to various use cases, such as exploring different scales beyond state-scale or applying it to other online repositories using existing data distribution systems, eliminating the need to develop their own.
AB - Reproducible environmental modelling often relies on spatial datasets as inputs, typically manually subset for specific areas. Yet, models can benefit from a data distribution approach facilitated by online repositories, and automating processes to foster reproducibility. This study introduces a method leveraging diverse state-scale spatial datasets to create cohesive packages for GIS-based environmental modelling. These datasets were generated and shared via GeoServer and THREDDS Data Server connected to HydroShare, contrasting with conventional distribution methods. Using the Regional Hydro-Ecologic Simulation System (RHESSys) across three U.S. catchment-scale watersheds, we demonstrate minimal errors in spatial inputs and model streamflow outputs compared to traditional approaches. This spatial data-sharing method facilitates consistent model creation, fostering reproducibility. Its broader impact allows scientists to tailor the method to various use cases, such as exploring different scales beyond state-scale or applying it to other online repositories using existing data distribution systems, eliminating the need to develop their own.
KW - GeoServer
KW - HydroShare
KW - Large spatial datasets
KW - Reproducible environmental modeling
KW - Server-side data access
KW - THREDDS data server
UR - http://www.scopus.com/inward/record.url?scp=85206888594&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85206888594&partnerID=8YFLogxK
U2 - 10.1016/j.envsoft.2024.106239
DO - 10.1016/j.envsoft.2024.106239
M3 - Article
AN - SCOPUS:85206888594
SN - 1364-8152
VL - 183
JO - Environmental Modelling and Software
JF - Environmental Modelling and Software
M1 - 106239
ER -