The RDP (Ribosomal Database Project)

Bonnie L. Maidak, Gary J. Olsen, Niels Larsen, Ross Overbeek, Michael J. McCaughey, Carl R. Woese

Research output: Contribution to journalArticlepeer-review

Abstract

The Ribosomal Database Project (RDP) is a curated database that offers ribosome-related data, analysis services and associated computer programs. The offerings include phylogenetically ordered alignments of ribosomal RNA (rRNA) sequences, derived phylogenetic trees, rRNA secondary structure diagrams, and various software for handling, analyzing and displaying alignments and trees. The data are available via anonymous FTP (rdp.life.uiuc.edu), electronic mail (server@rdp.life.uiuc.edu), gopher (rdpgopher.life. uiuc.edu) and WWW (http://rdpwww.life.uiuc.edu/). The electronic mail and WWW servers provide ribosomal probe checking, approximate phylogenetic placement of user-submitted sequences, screening for possible chimeric rRNA sequences, automated alignment, and a suggested placement of an unknown sequence on an existing phylogenetic tree.

Original languageEnglish (US)
Pages (from-to)109-110
Number of pages2
JournalNucleic acids research
Volume25
Issue number1
DOIs
StatePublished - Jan 1 1997

ASJC Scopus subject areas

  • Genetics

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