Statistics of cellular signal transduction as a race to the nucleus by multiple random walkers in compartment/phosphorylation space

Ting Lu, Tongye Shen, Chenghang Zong, Jeff Hasty, Peter G. Wolynes

Research output: Contribution to journalArticlepeer-review

Abstract

Cellular signal transduction often involves a reaction network of phosphorylation and transport events arranged with a ladder topology. If we keep track of the location of the phosphate groups describing an abstract state space, a simple model of signal transduction involving enzymes can be mapped on to a problem of how multiple biased random walkers compete to reach their target in the nucleus yielding a signal. Here, the first passage time probability and the survival probability for multiple walkers can be used to characterize the response of the network. The statistics of the first passage through the network has an asymmetric distribution with a long tail arising from the hierarchical structure of the network. This distribution implies a significant difference between the mean and the most probable signal transduction time. The response patterns for various external inputs generated by our model agree with recent experiments. In addition, the model predicts that there is an optimal phosphorylation enzyme concentration for rapid signal transduction.

Original languageEnglish (US)
Pages (from-to)16752-16757
Number of pages6
JournalProceedings of the National Academy of Sciences of the United States of America
Volume103
Issue number45
DOIs
StatePublished - Nov 7 2006
Externally publishedYes

Keywords

  • First passage time
  • NFAT
  • Stochastic biology

ASJC Scopus subject areas

  • Genetics
  • General

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