Sequence diversity of readthrough proteins of Soybean dwarf virus isolates from the Midwestern United States

T. Thekke Veetil; H. A. Hobbs; L. L. Domier

doi:10.1007/s00705-009-0370-4

Sequence diversity of readthrough proteins of Soybean dwarf virus isolates from the Midwestern United States

T. Thekke Veetil, H. A. Hobbs, L. L. Domier

Crop Sciences

Research output: Contribution to journal › Article › peer-review

Abstract

The amino acid sequence diversity of readthrough proteins (RTPs) of 24 dwarfing isolates of Soybean dwarf virus (SbDV) from Wisconsin and Illinois was analyzed. The RTP, a minor component of viral capsids, has a significant role in specificity of aphid transmission of luteovirids. Among the isolates, nucleotide sequence identities ranged from 95 to 100%. The predicted amino acid sequences differed at 56 amino acid positions in the 54 kDa RTD compared to only five positions in the 22 kDa CP. Phylogenetic analysis of both amino acid and nucleotide sequences showed three distinct clusters of SbDV isolates.

Original language	English (US)
Pages (from-to)	861-866
Number of pages	6
Journal	Archives of Virology
Volume	154
Issue number	5
DOIs	https://doi.org/10.1007/s00705-009-0370-4
State	Published - May 2009

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Virology

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10.1007/s00705-009-0370-4

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title = "Sequence diversity of readthrough proteins of Soybean dwarf virus isolates from the Midwestern United States",

abstract = "The amino acid sequence diversity of readthrough proteins (RTPs) of 24 dwarfing isolates of Soybean dwarf virus (SbDV) from Wisconsin and Illinois was analyzed. The RTP, a minor component of viral capsids, has a significant role in specificity of aphid transmission of luteovirids. Among the isolates, nucleotide sequence identities ranged from 95 to 100%. The predicted amino acid sequences differed at 56 amino acid positions in the 54 kDa RTD compared to only five positions in the 22 kDa CP. Phylogenetic analysis of both amino acid and nucleotide sequences showed three distinct clusters of SbDV isolates.",

author = "{Thekke Veetil}, T. and Hobbs, {H. A.} and Domier, {L. L.}",

note = "Funding Information: We thank A. Phibbs, and A. Barta for providing SbDV-infected Wisconsin soybean samples. This study was supported by funding from United States Department of Agriculture-Agricultural Research Service and the North Central Soybean Research Program.",

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doi = "10.1007/s00705-009-0370-4",

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T1 - Sequence diversity of readthrough proteins of Soybean dwarf virus isolates from the Midwestern United States

AU - Thekke Veetil, T.

AU - Hobbs, H. A.

AU - Domier, L. L.

N1 - Funding Information: We thank A. Phibbs, and A. Barta for providing SbDV-infected Wisconsin soybean samples. This study was supported by funding from United States Department of Agriculture-Agricultural Research Service and the North Central Soybean Research Program.

PY - 2009/5

Y1 - 2009/5

N2 - The amino acid sequence diversity of readthrough proteins (RTPs) of 24 dwarfing isolates of Soybean dwarf virus (SbDV) from Wisconsin and Illinois was analyzed. The RTP, a minor component of viral capsids, has a significant role in specificity of aphid transmission of luteovirids. Among the isolates, nucleotide sequence identities ranged from 95 to 100%. The predicted amino acid sequences differed at 56 amino acid positions in the 54 kDa RTD compared to only five positions in the 22 kDa CP. Phylogenetic analysis of both amino acid and nucleotide sequences showed three distinct clusters of SbDV isolates.

AB - The amino acid sequence diversity of readthrough proteins (RTPs) of 24 dwarfing isolates of Soybean dwarf virus (SbDV) from Wisconsin and Illinois was analyzed. The RTP, a minor component of viral capsids, has a significant role in specificity of aphid transmission of luteovirids. Among the isolates, nucleotide sequence identities ranged from 95 to 100%. The predicted amino acid sequences differed at 56 amino acid positions in the 54 kDa RTD compared to only five positions in the 22 kDa CP. Phylogenetic analysis of both amino acid and nucleotide sequences showed three distinct clusters of SbDV isolates.

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Sequence diversity of readthrough proteins of Soybean dwarf virus isolates from the Midwestern United States

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