Removing the bad apples: A simple bioinformatic method to improve loci-recovery in de novo RADseq data for non-model organisms

Keyphrases

• Missing Data 100%
• Bioinformatics Methods 100%
• Non-model Organism 100%
• RAD-seq 100%
• DNA Sequencing 20%
• Bioinformatics Tools 20%
• Dropout 20%
• Species Level 20%
• Population Level 20%
• Population Genetics 20%
• Genomic Resources 20%
• Restriction Sites 20%
• Resource Optimization 20%
• Genomic Markers 20%
• Software Stack 20%
• Non-model 20%
• Wet Laboratory 20%
• Sequencing Artifacts 20%
• DNA Quality 20%
• Model Taxon 20%
• Restriction Site-associated DNA 20%
• Library Preparation 20%
• Biological Interpretability 20%
• Allelic Dropout 20%
• Simple pipeline 20%

Biochemistry, Genetics and Molecular Biology

• Taxon 100%
• Allele 100%
• Restriction Site 100%
• Phylogeny 50%
• Population Genetics 50%
• DNA Flanking Region 50%