Abstract
Amide I and Amide III vibrational modes are frequently used to study protein secondary structure with Fourier transform infrared (FT-IR) spectroscopy. However, for protein mixtures, neither the sole Amide I nor Amide III region provides sufficient information for structural quantitation because of overlapping peaks, especially in the Amide I region. Here, an improved quantitative approach is proposed to estimate secondary structure of protein systems using resolution enhancement and curve-fitting data processing techniques on a gluten model system to investigate structure-function relationships. Twelve different scenarios were prepared to assign bands in the Amide I region. Frequency ranges of 1660–1640 cm−1 and 1665–1660 cm−1 were found to highly contribute to variability in secondary structure contents of samples. Utilization of the Amide III region as a conducive tool to assign bands in the Amide I region led to a better differentiation of some secondary structural motifs and a more accurate quantitation of protein secondary structure. The study presents an understanding of FT-IR data analysis for a quick technique to assess secondary structures of protein mixtures.
| Original language | English (US) |
|---|---|
| Pages (from-to) | 2753-2760 |
| Number of pages | 8 |
| Journal | International Journal of Biological Macromolecules |
| Volume | 164 |
| DOIs | |
| State | Published - Dec 1 2020 |
| Externally published | Yes |
Keywords
- FT-IR
- Gluten
- Protein secondary structure
ASJC Scopus subject areas
- Structural Biology
- Biochemistry
- Molecular Biology
- Economics and Econometrics
- General Energy
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