Network view: 3D display and analysis of protein ·rNA interaction networks

Research output: Contribution to journalArticlepeer-review

Abstract

Network view is an application for the display and analysis of protein · RNA interaction networks derived from structure and/or dynamics. These networks typically model individual protein residues and nucleic acid monomers as nodes and their pairwise contacts as edges with associated weights. NetworkView projects the network onto the underlying 3D molecular structure so that visualization and analysis of the network can be coupled to physical and biological properties. NetworkView is implemented as a plugin to the molecular visualization software VMD.

Original languageEnglish (US)
Pages (from-to)3000-3001
Number of pages2
JournalBioinformatics
Volume28
Issue number22
DOIs
StatePublished - Nov 2012

ASJC Scopus subject areas

  • Statistics and Probability
  • Biochemistry
  • Molecular Biology
  • Computer Science Applications
  • Computational Theory and Mathematics
  • Computational Mathematics

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