TY - JOUR
T1 - Molecular diversity and genomic organisation of the α, β and γ eye lens crystallins from the Antarctic toothfish Dissostichus mawsoni
AU - Kiss, Andor J.
AU - Cheng, C. H.Christina
N1 - Funding Information:
The authors wish to thank Prof. Mason Posner (Dept. Biology, Ashland University, Ashland, Ohio, USA) for suggestions on redesigning of the toothfish αB isoform specific primers (DRAB-1 and DRAB1-2), as well as helpful discussions during the preparation of this manuscript. In addition the authors thank the anonymous reviewers for their helpful comments and critiques. This work was supported by NSF grant OPP 02-31006 to C-H.C.C. and A.L.D.
PY - 2008/6
Y1 - 2008/6
N2 - The eye lens of the Antarctic toothfish living in the - 2 °C Southern Ocean is cold-stable. To investigate the molecular basis of this cold stability, we isolated, cloned and sequenced 22 full length crystallin cDNAs. We found two α crystallins (αA, αB), six β crystallins (βA1, βA2, βA4, βB1, βB2, βB3) and 14 γ crystallins (γN, γS1, γS2, γM1, γM3, γM4, γM5, γM7, γM8a, γM8b, γM8c, γM8d, γM8e, and γM9). Alignments of α, β and γ with other known crystallin sequences indicate that toothfish α and β crystallins are relatively conserved orthologues of their vertebrate counterparts, but the toothfish and other fish γM crystallins form a distinct group that are not orthologous to mammalian γ crystallins. A preliminary Fingerprinted Contig analysis of clones containing crystallin genes screened from a toothfish BAC library indicated α crystallin genes occurred in a single genomic region of ~ 266 kbp, β crystallin genes in ~ 273 kbp, while the γ crystallin gene family occurred in two separate regions of ~ 180 and ~ 296 kbp. In phylogenetic analysis, the γM isoforms of the ectothermic toothfish displayed a diversity not seen with endothermic mammalian γ crystallins. Similar to other fishes, several toothfish γ crystallins are methionine-rich (γM isoforms) which may have predisposed the toothfish lens to biochemically attenuate γ crystallin hydrophobicity allowing for cold adaptation. In addition to high methionine content, conservation of αβ crystallins both in sequence and abundance suggests greater functional constraints relative to γ crystallins. Conversely, reduced constraints upon γ crystallins could have allowed for greater evolutionary plasticity resulting in increased polydispersity of γ crystallins contributing to the cold-stability of the Antarctic toothfish lens.
AB - The eye lens of the Antarctic toothfish living in the - 2 °C Southern Ocean is cold-stable. To investigate the molecular basis of this cold stability, we isolated, cloned and sequenced 22 full length crystallin cDNAs. We found two α crystallins (αA, αB), six β crystallins (βA1, βA2, βA4, βB1, βB2, βB3) and 14 γ crystallins (γN, γS1, γS2, γM1, γM3, γM4, γM5, γM7, γM8a, γM8b, γM8c, γM8d, γM8e, and γM9). Alignments of α, β and γ with other known crystallin sequences indicate that toothfish α and β crystallins are relatively conserved orthologues of their vertebrate counterparts, but the toothfish and other fish γM crystallins form a distinct group that are not orthologous to mammalian γ crystallins. A preliminary Fingerprinted Contig analysis of clones containing crystallin genes screened from a toothfish BAC library indicated α crystallin genes occurred in a single genomic region of ~ 266 kbp, β crystallin genes in ~ 273 kbp, while the γ crystallin gene family occurred in two separate regions of ~ 180 and ~ 296 kbp. In phylogenetic analysis, the γM isoforms of the ectothermic toothfish displayed a diversity not seen with endothermic mammalian γ crystallins. Similar to other fishes, several toothfish γ crystallins are methionine-rich (γM isoforms) which may have predisposed the toothfish lens to biochemically attenuate γ crystallin hydrophobicity allowing for cold adaptation. In addition to high methionine content, conservation of αβ crystallins both in sequence and abundance suggests greater functional constraints relative to γ crystallins. Conversely, reduced constraints upon γ crystallins could have allowed for greater evolutionary plasticity resulting in increased polydispersity of γ crystallins contributing to the cold-stability of the Antarctic toothfish lens.
KW - Alpha
KW - Antarctic toothfish
KW - Bacterial artificial chromosome
KW - Beta
KW - Crystallins
KW - Gamma
KW - Genome organisation
KW - Lens
KW - Tetraodon
KW - cDNA
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U2 - 10.1016/j.cbd.2008.02.002
DO - 10.1016/j.cbd.2008.02.002
M3 - Article
C2 - 20483216
AN - SCOPUS:43849104350
VL - 3
SP - 155
EP - 171
JO - Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics
JF - Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics
SN - 1744-117X
IS - 2
ER -