KBase: The United States department of energy systems biology knowledgebase

Adam P. Arkin; Robert W. Cottingham; Christopher S. Henry; Nomi L. Harris; Rick L. Stevens; Sergei Maslov; Paramvir Dehal; Doreen Ware; Fernando Perez; Shane Canon; Michael W. Sneddon; Matthew L. Henderson; William J. Riehl; Dan Murphy-Olson; Stephen Y. Chan; Roy T. Kamimura; Sunita Kumari; Meghan M. Drake; Thomas S. Brettin; Elizabeth M. Glass; Dylan Chivian; Dan Gunter; David J. Weston; Benjamin H. Allen; Jason Baumohl; Aaron A. Best; Ben Bowen; Steven E. Brenner; Christopher C. Bun; John Marc Chandonia; Jer Ming Chia; Ric Colasanti; Neal Conrad; James J. Davis; Brian H. Davison; Matthew Dejongh; Scott Devoid; Emily Dietrich; Inna Dubchak; Janaka N. Edirisinghe; Gang Fang; José P. Faria; Paul M. Frybarger; Wolfgang Gerlach; Mark Gerstein; Annette Greiner; James Gurtowski; Holly L. Haun; Fei He; Rashmi Jain; Marcin P. Joachimiak; Kevin P. Keegan; Shinnosuke Kondo; Vivek Kumar; Miriam L. Land; Folker Meyer; Marissa Mills; Pavel S. Novichkov; Taeyun Oh; Gary J. Olsen; Robert Olson; Bruce Parrello; Shiran Pasternak; Erik Pearson; Sarah S. Poon; Gavin A. Price; Srividya Ramakrishnan; Priya Ranjan; Pamela C. Ronald; Michael C. Schatz; Samuel M.D. Seaver; Maulik Shukla; Roman A. Sutormin; Mustafa H. Syed; James Thomason; Nathan L. Tintle; Daifeng Wang; Fangfang Xia; Hyunseung Yoo; Shinjae Yoo; Dantong Yu

doi:10.1038/nbt.4163

KBase: The United States department of energy systems biology knowledgebase

Adam P. Arkin, Robert W. Cottingham, Christopher S. Henry, Nomi L. Harris, Rick L. Stevens, Sergei Maslov, Paramvir Dehal, Doreen Ware, Fernando Perez, Shane Canon, Michael W. Sneddon, Matthew L. Henderson, William J. Riehl, Dan Murphy-Olson, Stephen Y. Chan, Roy T. Kamimura, Sunita Kumari, Meghan M. Drake, Thomas S. Brettin, Elizabeth M. GlassDylan Chivian, Dan Gunter, David J. Weston, Benjamin H. Allen, Jason Baumohl, Aaron A. Best, Ben Bowen, Steven E. Brenner, Christopher C. Bun, John Marc Chandonia, Jer Ming Chia, Ric Colasanti, Neal Conrad, James J. Davis, Brian H. Davison, Matthew Dejongh, Scott Devoid, Emily Dietrich, Inna Dubchak, Janaka N. Edirisinghe, Gang Fang, José P. Faria, Paul M. Frybarger, Wolfgang Gerlach, Mark Gerstein, Annette Greiner, James Gurtowski, Holly L. Haun, Fei He, Rashmi Jain, Marcin P. Joachimiak, Kevin P. Keegan, Shinnosuke Kondo, Vivek Kumar, Miriam L. Land, Folker Meyer, Marissa Mills, Pavel S. Novichkov, Taeyun Oh, Gary J. Olsen, Robert Olson, Bruce Parrello, Shiran Pasternak, Erik Pearson, Sarah S. Poon, Gavin A. Price, Srividya Ramakrishnan, Priya Ranjan, Pamela C. Ronald, Michael C. Schatz, Samuel M.D. Seaver, Maulik Shukla, Roman A. Sutormin, Mustafa H. Syed, James Thomason, Nathan L. Tintle, Daifeng Wang, Fangfang Xia, Hyunseung Yoo, Shinjae Yoo, Dantong Yu

Research output: Contribution to journal › Letter

Original language	English (US)
Pages (from-to)	566-569
Number of pages	4
Journal	Nature Biotechnology
Volume	36
Issue number	7
DOIs	https://doi.org/10.1038/nbt.4163
State	Published - Jul 6 2018

ASJC Scopus subject areas

Biotechnology
Bioengineering
Applied Microbiology and Biotechnology
Molecular Medicine
Biomedical Engineering

Access to Document

10.1038/nbt.4163

Cite this

Arkin, A. P., Cottingham, R. W., Henry, C. S., Harris, N. L., Stevens, R. L., Maslov, S., Dehal, P., Ware, D., Perez, F., Canon, S., Sneddon, M. W., Henderson, M. L., Riehl, W. J., Murphy-Olson, D., Chan, S. Y., Kamimura, R. T., Kumari, S., Drake, M. M., Brettin, T. S., ... Yu, D. (2018). KBase: The United States department of energy systems biology knowledgebase. Nature Biotechnology, 36(7), 566-569. https://doi.org/10.1038/nbt.4163

KBase : The United States department of energy systems biology knowledgebase. / Arkin, Adam P.; Cottingham, Robert W.; Henry, Christopher S.; Harris, Nomi L.; Stevens, Rick L.; Maslov, Sergei; Dehal, Paramvir; Ware, Doreen; Perez, Fernando; Canon, Shane; Sneddon, Michael W.; Henderson, Matthew L.; Riehl, William J.; Murphy-Olson, Dan; Chan, Stephen Y.; Kamimura, Roy T.; Kumari, Sunita; Drake, Meghan M.; Brettin, Thomas S.; Glass, Elizabeth M.; Chivian, Dylan; Gunter, Dan; Weston, David J.; Allen, Benjamin H.; Baumohl, Jason; Best, Aaron A.; Bowen, Ben; Brenner, Steven E.; Bun, Christopher C.; Chandonia, John Marc; Chia, Jer Ming; Colasanti, Ric; Conrad, Neal; Davis, James J.; Davison, Brian H.; Dejongh, Matthew; Devoid, Scott; Dietrich, Emily; Dubchak, Inna; Edirisinghe, Janaka N.; Fang, Gang; Faria, José P.; Frybarger, Paul M.; Gerlach, Wolfgang; Gerstein, Mark; Greiner, Annette; Gurtowski, James; Haun, Holly L.; He, Fei; Jain, Rashmi; Joachimiak, Marcin P.; Keegan, Kevin P.; Kondo, Shinnosuke; Kumar, Vivek; Land, Miriam L.; Meyer, Folker; Mills, Marissa; Novichkov, Pavel S.; Oh, Taeyun; Olsen, Gary J.; Olson, Robert; Parrello, Bruce; Pasternak, Shiran; Pearson, Erik; Poon, Sarah S.; Price, Gavin A.; Ramakrishnan, Srividya; Ranjan, Priya; Ronald, Pamela C.; Schatz, Michael C.; Seaver, Samuel M.D.; Shukla, Maulik; Sutormin, Roman A.; Syed, Mustafa H.; Thomason, James; Tintle, Nathan L.; Wang, Daifeng; Xia, Fangfang; Yoo, Hyunseung; Yoo, Shinjae; Yu, Dantong.

In: Nature Biotechnology, Vol. 36, No. 7, 06.07.2018, p. 566-569.

Research output: Contribution to journal › Letter

Arkin, AP, Cottingham, RW, Henry, CS, Harris, NL, Stevens, RL, Maslov, S, Dehal, P, Ware, D, Perez, F, Canon, S, Sneddon, MW, Henderson, ML, Riehl, WJ, Murphy-Olson, D, Chan, SY, Kamimura, RT, Kumari, S, Drake, MM, Brettin, TS, Glass, EM, Chivian, D, Gunter, D, Weston, DJ, Allen, BH, Baumohl, J, Best, AA, Bowen, B, Brenner, SE, Bun, CC, Chandonia, JM, Chia, JM, Colasanti, R, Conrad, N, Davis, JJ, Davison, BH, Dejongh, M, Devoid, S, Dietrich, E, Dubchak, I, Edirisinghe, JN, Fang, G, Faria, JP, Frybarger, PM, Gerlach, W, Gerstein, M, Greiner, A, Gurtowski, J, Haun, HL, He, F, Jain, R, Joachimiak, MP, Keegan, KP, Kondo, S, Kumar, V, Land, ML, Meyer, F, Mills, M, Novichkov, PS, Oh, T, Olsen, GJ, Olson, R, Parrello, B, Pasternak, S, Pearson, E, Poon, SS, Price, GA, Ramakrishnan, S, Ranjan, P, Ronald, PC, Schatz, MC, Seaver, SMD, Shukla, M, Sutormin, RA, Syed, MH, Thomason, J, Tintle, NL, Wang, D, Xia, F, Yoo, H, Yoo, S & Yu, D 2018, 'KBase: The United States department of energy systems biology knowledgebase', Nature Biotechnology, vol. 36, no. 7, pp. 566-569. https://doi.org/10.1038/nbt.4163

Arkin, Adam P. ; Cottingham, Robert W. ; Henry, Christopher S. ; Harris, Nomi L. ; Stevens, Rick L. ; Maslov, Sergei ; Dehal, Paramvir ; Ware, Doreen ; Perez, Fernando ; Canon, Shane ; Sneddon, Michael W. ; Henderson, Matthew L. ; Riehl, William J. ; Murphy-Olson, Dan ; Chan, Stephen Y. ; Kamimura, Roy T. ; Kumari, Sunita ; Drake, Meghan M. ; Brettin, Thomas S. ; Glass, Elizabeth M. ; Chivian, Dylan ; Gunter, Dan ; Weston, David J. ; Allen, Benjamin H. ; Baumohl, Jason ; Best, Aaron A. ; Bowen, Ben ; Brenner, Steven E. ; Bun, Christopher C. ; Chandonia, John Marc ; Chia, Jer Ming ; Colasanti, Ric ; Conrad, Neal ; Davis, James J. ; Davison, Brian H. ; Dejongh, Matthew ; Devoid, Scott ; Dietrich, Emily ; Dubchak, Inna ; Edirisinghe, Janaka N. ; Fang, Gang ; Faria, José P. ; Frybarger, Paul M. ; Gerlach, Wolfgang ; Gerstein, Mark ; Greiner, Annette ; Gurtowski, James ; Haun, Holly L. ; He, Fei ; Jain, Rashmi ; Joachimiak, Marcin P. ; Keegan, Kevin P. ; Kondo, Shinnosuke ; Kumar, Vivek ; Land, Miriam L. ; Meyer, Folker ; Mills, Marissa ; Novichkov, Pavel S. ; Oh, Taeyun ; Olsen, Gary J. ; Olson, Robert ; Parrello, Bruce ; Pasternak, Shiran ; Pearson, Erik ; Poon, Sarah S. ; Price, Gavin A. ; Ramakrishnan, Srividya ; Ranjan, Priya ; Ronald, Pamela C. ; Schatz, Michael C. ; Seaver, Samuel M.D. ; Shukla, Maulik ; Sutormin, Roman A. ; Syed, Mustafa H. ; Thomason, James ; Tintle, Nathan L. ; Wang, Daifeng ; Xia, Fangfang ; Yoo, Hyunseung ; Yoo, Shinjae ; Yu, Dantong. / KBase : The United States department of energy systems biology knowledgebase. In: Nature Biotechnology. 2018 ; Vol. 36, No. 7. pp. 566-569.

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