Isotropic chemical shifts in magic-angle spinning NMR spectra of proteins

Benjamin J. Wylie, Lindsay J. Sperling, Chad M. Rienstra

Research output: Contribution to journalArticle

Abstract

Here we examine the effect of magic-angle spinning (MAS) rate upon lineshape and observed peak position for backbone carbonyl (C′) peaks in NMR spectra of uniformly-13C,15N-labeled (U- 13C,15N) solid proteins. 2D N-C' spectra of U- 13C,15N microcrystalline protein GB1 were acquired at six MAS rates, and the site-resolved C′ lineshapes were analyzed by numerical simulations and comparison to spectra from a sparsely labeled sample (derived from 1,3-13C-glycerol). Spectra of the U-13C, 15N sample demonstrate large variations in the signal-to-noise ratio and peak positions, which are absent in spectra of the sparsely labeled sample, in which most 13C′ sites do not possess a directly bonded 13CA. These effects therefore are a consequence of rotational resonance, which is a well-known phenomenon. Yet the magnitude of this effect pertaining to chemical shift assignment has not previously been examined. To quantify these effects in high-resolution protein spectra, we performed exact numerical two- and four-spin simulations of the C′ lineshapes, which reproduced the experimentally observed features. Observed peak positions differ from the isotropic shift by up to 1.0 ppm, even for MAS rates relatively far (a few ppm) from rotational resonance. Although under these circumstances the correct isotropic chemical shift values may be determined through simulation, systematic errors are minimized when the MAS rate is equivalent to ∼85 ppm for 13C. This moderate MAS condition simplifies spectral assignment and enables data sets from different labeling patterns and spinning rates to be used most efficiently for structure determination.

Original languageEnglish (US)
Pages (from-to)405-413
Number of pages9
JournalPhysical Chemistry Chemical Physics
Volume10
Issue number3
DOIs
StatePublished - Jan 14 2008

ASJC Scopus subject areas

  • Physics and Astronomy(all)
  • Physical and Theoretical Chemistry

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