TY - JOUR
T1 - HYSCORE and QM/MM Studies of Second Sphere Variants of the Type 1 Copper Site in Azurin
T2 - Influence of Mutations on the Hyperfine Couplings of Remote Nitrogens
AU - Lam, Quan
AU - Van Stappen, Casey
AU - Lu, Yi
AU - Dikanov, Sergei A.
N1 - The authors acknowledge the U.S. National Science Foundation (CHE-2201279 to Y.L.) and the U.S. National Institute of Health (F32GM145134 to C.V.S.) for funding the research described in this work. We also thank the Robert A. Welch Foundation (Grant F-0020) for support of the Lu group research program at the University of Texas at Austin. The pulsed EPR data collection was supported in part by the Grant DE-FG0208ER15960 (to S.A.D.) from the Physical Biosciences Program, Chemical Sciences, Geosciences, and Biosciences Division, Office of Basic Energy Sciences, Office of Sciences, U.S. Department of Energy. C.V.S. dearly thanks Dr. Ragnar Bjo\u0308rnsson for his guidance and assistance in the employment of the program ASH, Prof. Dr. Serena DeBeer for computational resources, and Dr. Dimitrios Pantazis for fruitful discussions regarding DLPNO-CCSD theory.
PY - 2024/4/11
Y1 - 2024/4/11
N2 - Secondary coordination sphere (SCS) interactions have been shown to play important roles in tuning reduction potentials and electron transfer (ET) properties of the Type 1 copper proteins, but the precise roles of these interactions are not fully understood. In this work, we examined the influence of F114P, F114N, and N47S mutations in the SCS on the electronic structure of the T1 copper center in azurin (Az) by studying the hyperfine couplings of (i) histidine remote Nϵ nitrogens and (ii) the amide Np using the two-dimensional (2D) pulsed electron paramagnetic resonance (EPR) technique HYSCORE (hyperfine sublevel correlation) combined with quantum mechanics/molecular mechanics (QM/MM) and DLPNO-CCSD calculations. Our data show that some components of hyperfine tensor and isotropic coupling in N47SAz and F114PAz (but not F114NAz) deviate by up to ∼±20% from WTAz, indicating that these mutations significantly influence the spin density distribution between the CuII site and coordinating ligands. Furthermore, our calculations support the assignment of Np to the backbone amide of residue 47 (both in Asn and Ser variants). Since the spin density distributions play an important role in tuning the covalency of the Cu-Scys bond of Type 1 copper center that has been shown to be crucial in controlling the reduction potentials, this study provides additional insights into the electron spin factor in tuning the reduction potentials and ET properties.
AB - Secondary coordination sphere (SCS) interactions have been shown to play important roles in tuning reduction potentials and electron transfer (ET) properties of the Type 1 copper proteins, but the precise roles of these interactions are not fully understood. In this work, we examined the influence of F114P, F114N, and N47S mutations in the SCS on the electronic structure of the T1 copper center in azurin (Az) by studying the hyperfine couplings of (i) histidine remote Nϵ nitrogens and (ii) the amide Np using the two-dimensional (2D) pulsed electron paramagnetic resonance (EPR) technique HYSCORE (hyperfine sublevel correlation) combined with quantum mechanics/molecular mechanics (QM/MM) and DLPNO-CCSD calculations. Our data show that some components of hyperfine tensor and isotropic coupling in N47SAz and F114PAz (but not F114NAz) deviate by up to ∼±20% from WTAz, indicating that these mutations significantly influence the spin density distribution between the CuII site and coordinating ligands. Furthermore, our calculations support the assignment of Np to the backbone amide of residue 47 (both in Asn and Ser variants). Since the spin density distributions play an important role in tuning the covalency of the Cu-Scys bond of Type 1 copper center that has been shown to be crucial in controlling the reduction potentials, this study provides additional insights into the electron spin factor in tuning the reduction potentials and ET properties.
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U2 - 10.1021/acs.jpcb.3c08194
DO - 10.1021/acs.jpcb.3c08194
M3 - Article
C2 - 38564809
AN - SCOPUS:85189519788
SN - 1520-6106
VL - 128
SP - 3350
EP - 3359
JO - Journal of Physical Chemistry B
JF - Journal of Physical Chemistry B
IS - 14
ER -