TY - JOUR
T1 - How the headpiece hinge angle is opened
T2 - New insights into the dynamics of integrin activation
AU - Puklin-Faucher, Eileen
AU - Gao, Mu
AU - Schulten, Klaus
AU - Vogel, Viola
PY - 2006/10/23
Y1 - 2006/10/23
N2 - How the integrin head transitions to the high- affinity conformation is debated. Although experiments link activation with the opening of the hinge angle between the βA and hybrid domains in the ligand- binding headpiece, this hinge is closed in the liganded α vβ 3 integrin crystal structure. We replaced the RGD peptide ligand of this structure with the 10th type III fibronectin module (FnIII 10) and discovered through molecular dynamics (MD) equilibrations that when the conformational constraints of the leg domains are lifted, the βA/hybrid hinge opens spontaneously. Together with additional equilibrations on the same nanosecond timescale in which small structural variations impeded hinge-angle opening, these simulations allowed us to identify the allosteric pathway along which ligand-induced strain propagates via elastic distortions of the α1 helix to the βA/hybrid domain hinge. Finally, we show with steered MD how force accelerates hinge-angle opening along the same allosteric pathway. Together with available experimental data, these predictions provide a novel framework for understanding integrin activation.
AB - How the integrin head transitions to the high- affinity conformation is debated. Although experiments link activation with the opening of the hinge angle between the βA and hybrid domains in the ligand- binding headpiece, this hinge is closed in the liganded α vβ 3 integrin crystal structure. We replaced the RGD peptide ligand of this structure with the 10th type III fibronectin module (FnIII 10) and discovered through molecular dynamics (MD) equilibrations that when the conformational constraints of the leg domains are lifted, the βA/hybrid hinge opens spontaneously. Together with additional equilibrations on the same nanosecond timescale in which small structural variations impeded hinge-angle opening, these simulations allowed us to identify the allosteric pathway along which ligand-induced strain propagates via elastic distortions of the α1 helix to the βA/hybrid domain hinge. Finally, we show with steered MD how force accelerates hinge-angle opening along the same allosteric pathway. Together with available experimental data, these predictions provide a novel framework for understanding integrin activation.
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U2 - 10.1083/jcb.200602071
DO - 10.1083/jcb.200602071
M3 - Article
C2 - 17060501
AN - SCOPUS:33750337536
SN - 0021-9525
VL - 175
SP - 349
EP - 360
JO - Journal of Cell Biology
JF - Journal of Cell Biology
IS - 2
ER -