Federating Structural Models and Data: Outcomes from A Workshop on Archiving Integrative Structures

Helen M. Berman, Paul D. Adams, Alexandre A. Bonvin, Stephen K. Burley, Bridget Carragher, Wah Chiu, Frank DiMaio, Thomas E. Ferrin, Margaret J. Gabanyi, Thomas D. Goddard, Patrick R. Griffin, Juergen Haas, Christian A. Hanke, Jeffrey C. Hoch, Gerhard Hummer, Genji Kurisu, Catherine L. Lawson, Alexander Leitner, John L. Markley, Jens MeilerGaetano T. Montelione, George N. Phillips, Thomas Prisner, Juri Rappsilber, David C. Schriemer, Torsten Schwede, Claus A.M. Seidel, Timothy S. Strutzenberg, Dmitri I. Svergun, Emad Tajkhorshid, Jill Trewhella, Brinda Vallat, Sameer Velankar, Geerten W. Vuister, Benjamin Webb, John D. Westbrook, Kate L. White, Andrej Sali

Research output: Contribution to journalArticle

Abstract

Structures of biomolecular systems are increasingly computed by integrative modeling. In this approach, a structural model is constructed by combining information from multiple sources, including varied experimental methods and prior models. In 2019, a Workshop was held as a Biophysical Society Satellite Meeting to assess progress and discuss further requirements for archiving integrative structures. The primary goal of the Workshop was to build consensus for addressing the challenges involved in creating common data standards, building methods for federated data exchange, and developing mechanisms for validating integrative structures. The summary of the Workshop and the recommendations that emerged are presented here. Structures of biomolecular systems are increasingly computed by integrative modeling based on multiple types of data. In 2019, a Workshop was held to assess progress and discuss further requirements for archiving integrative structures. The summary of the Workshop and the recommendations that emerged are presented here.

Original languageEnglish (US)
Pages (from-to)1745-1759
Number of pages15
JournalStructure
Volume27
Issue number12
DOIs
StatePublished - Dec 3 2019

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ASJC Scopus subject areas

  • Structural Biology
  • Molecular Biology

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Berman, H. M., Adams, P. D., Bonvin, A. A., Burley, S. K., Carragher, B., Chiu, W., ... Sali, A. (2019). Federating Structural Models and Data: Outcomes from A Workshop on Archiving Integrative Structures. Structure, 27(12), 1745-1759. https://doi.org/10.1016/j.str.2019.11.002

Federating Structural Models and Data : Outcomes from A Workshop on Archiving Integrative Structures. / Berman, Helen M.; Adams, Paul D.; Bonvin, Alexandre A.; Burley, Stephen K.; Carragher, Bridget; Chiu, Wah; DiMaio, Frank; Ferrin, Thomas E.; Gabanyi, Margaret J.; Goddard, Thomas D.; Griffin, Patrick R.; Haas, Juergen; Hanke, Christian A.; Hoch, Jeffrey C.; Hummer, Gerhard; Kurisu, Genji; Lawson, Catherine L.; Leitner, Alexander; Markley, John L.; Meiler, Jens; Montelione, Gaetano T.; Phillips, George N.; Prisner, Thomas; Rappsilber, Juri; Schriemer, David C.; Schwede, Torsten; Seidel, Claus A.M.; Strutzenberg, Timothy S.; Svergun, Dmitri I.; Tajkhorshid, Emad; Trewhella, Jill; Vallat, Brinda; Velankar, Sameer; Vuister, Geerten W.; Webb, Benjamin; Westbrook, John D.; White, Kate L.; Sali, Andrej.

In: Structure, Vol. 27, No. 12, 03.12.2019, p. 1745-1759.

Research output: Contribution to journalArticle

Berman, HM, Adams, PD, Bonvin, AA, Burley, SK, Carragher, B, Chiu, W, DiMaio, F, Ferrin, TE, Gabanyi, MJ, Goddard, TD, Griffin, PR, Haas, J, Hanke, CA, Hoch, JC, Hummer, G, Kurisu, G, Lawson, CL, Leitner, A, Markley, JL, Meiler, J, Montelione, GT, Phillips, GN, Prisner, T, Rappsilber, J, Schriemer, DC, Schwede, T, Seidel, CAM, Strutzenberg, TS, Svergun, DI, Tajkhorshid, E, Trewhella, J, Vallat, B, Velankar, S, Vuister, GW, Webb, B, Westbrook, JD, White, KL & Sali, A 2019, 'Federating Structural Models and Data: Outcomes from A Workshop on Archiving Integrative Structures', Structure, vol. 27, no. 12, pp. 1745-1759. https://doi.org/10.1016/j.str.2019.11.002
Berman HM, Adams PD, Bonvin AA, Burley SK, Carragher B, Chiu W et al. Federating Structural Models and Data: Outcomes from A Workshop on Archiving Integrative Structures. Structure. 2019 Dec 3;27(12):1745-1759. https://doi.org/10.1016/j.str.2019.11.002
Berman, Helen M. ; Adams, Paul D. ; Bonvin, Alexandre A. ; Burley, Stephen K. ; Carragher, Bridget ; Chiu, Wah ; DiMaio, Frank ; Ferrin, Thomas E. ; Gabanyi, Margaret J. ; Goddard, Thomas D. ; Griffin, Patrick R. ; Haas, Juergen ; Hanke, Christian A. ; Hoch, Jeffrey C. ; Hummer, Gerhard ; Kurisu, Genji ; Lawson, Catherine L. ; Leitner, Alexander ; Markley, John L. ; Meiler, Jens ; Montelione, Gaetano T. ; Phillips, George N. ; Prisner, Thomas ; Rappsilber, Juri ; Schriemer, David C. ; Schwede, Torsten ; Seidel, Claus A.M. ; Strutzenberg, Timothy S. ; Svergun, Dmitri I. ; Tajkhorshid, Emad ; Trewhella, Jill ; Vallat, Brinda ; Velankar, Sameer ; Vuister, Geerten W. ; Webb, Benjamin ; Westbrook, John D. ; White, Kate L. ; Sali, Andrej. / Federating Structural Models and Data : Outcomes from A Workshop on Archiving Integrative Structures. In: Structure. 2019 ; Vol. 27, No. 12. pp. 1745-1759.
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