Enzyme-mimetic self-catalyzed polymerization of polypeptide helices

Ziyuan Song, Hailin Fu, Ryan Baumgartner, Lingyang Zhu, Kuo Chih Shih, Yingchun Xia, Xuetao Zheng, Lichen Yin, Christophe Chipot, Yao Lin, Jianjun Cheng

Research output: Contribution to journalArticle

Abstract

Enzymes provide optimal three-dimensional structures for substrate binding and the subsequent accelerated reaction. Such folding-dependent catalytic behaviors, however, are seldom mechanistically explored with reduced structural complexity. Here, we demonstrate that the α-helix, a much simpler structural motif of enzyme, can facilitate its own growth through the self-catalyzed polymerization of N-carboxyanhydride (NCA) in dichloromethane. The reversible binding between the N terminus of α-helical polypeptides and NCAs promotes rate acceleration of the subsequent ring-opening reaction. A two-stage, Michaelis–Menten-type kinetic model is proposed by considering the binding and reaction between the propagating helical chains and the monomers, and is successfully utilized to predict the molecular weights and molecular-weight distributions of the resulting polymers. This work elucidates the mechanism of helix-induced, enzyme-mimetic catalysis, emphasizes the importance of solvent choice in the discovery of new reaction type, and provides a route for rapid production of well-defined synthetic polypeptides by taking advantage of self-accelerated ring-opening polymerizations.

Original languageEnglish (US)
Article number5470
JournalNature communications
Volume10
Issue number1
DOIs
StatePublished - Dec 1 2019

ASJC Scopus subject areas

  • Chemistry(all)
  • Biochemistry, Genetics and Molecular Biology(all)
  • Physics and Astronomy(all)

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    Song, Z., Fu, H., Baumgartner, R., Zhu, L., Shih, K. C., Xia, Y., Zheng, X., Yin, L., Chipot, C., Lin, Y., & Cheng, J. (2019). Enzyme-mimetic self-catalyzed polymerization of polypeptide helices. Nature communications, 10(1), [5470]. https://doi.org/10.1038/s41467-019-13502-w