TY - JOUR
T1 - Effect of histidine covalent modification on strigolactone receptor activation and selectivity
AU - Chen, Jiming
AU - Shukla, Diwakar
N1 - This research was part of the Blue Waters sustained-petascale computing project, which was supported by the National Science Foundation (award nos. OCI-0725070 and ACI-1238993), the State of Illinois, and, as of December 2019, the National Geospatial-Intelligence Agency. Blue Waters was a joint effort of the University of Illinois at Urbana Champaign and its National Center for Supercomputing Applications. The authors also acknowledge computational resources from the donors at the Folding@Home distributed computing platform and the Delta supercomputer at the National Center for Supercomputing Applications. J.C. is a member of the NIH Chemistry-Biology Interface Training Program (T32-GM136629). D.S. acknowledges support from the CAS Fellowship, Center for Advanced Studies at University of Illinois at Urbana Champaign, and a Sloan Research Fellowship from the Alfred P. Sloan Foundation. The authors declare no competing interests.
This research was part of the Blue Waters sustained-petascale computing project, which was supported by the National Science Foundation (award nos. OCI-0725070 and ACI-1238993 ), the State of Illinois, and, as of December 2019, the National Geospatial-Intelligence Agency. Blue Waters was a joint effort of the University of Illinois at Urbana Champaign and its National Center for Supercomputing Applications. The authors also acknowledge computational resources from the donors at the Folding@Home distributed computing platform and the Delta supercomputer at the National Center for Supercomputing Applications. J.C. is a member of the NIH Chemistry-Biology Interface Training Program ( T32-GM136629 ). D.S. acknowledges support from the CAS Fellowship, Center for Advanced Studies at University of Illinois at Urbana Champaign, and a Sloan Research Fellowship from the Alfred P. Sloan Foundation.
PY - 2023/4/4
Y1 - 2023/4/4
N2 - The parasitic weed Striga has led to billions of dollars’ worth of agricultural productivity loss worldwide. Striga detects host plants using compounds of the strigolactone class of phytohormones. Early steps in the strigolactone signaling pathway involve substrate binding and hydrolysis followed by a conformational change to an “active” or “closed” state, after which it associates with a MAX2-family downstream signaling partner. The structures of the inactive and active states of strigolactone receptors are known through X-ray crystallography, and the transition pathway from the inactive to active state in apo receptors has previously been characterized using molecular dynamics simulations. However, it also has been suggested that a covalent butenolide modification of the receptor on the catalytic histidine through substrate hydrolysis promotes formation of the active state. Using molecular dynamics simulations, we show that the presence of the covalent butenolide enhances activation in both AtD14, a receptor found in Arabidopsis, and ShHTL7, a receptor found in Striga, but the enhancement is ∼50 times greater in ShHTL7. We also show that several conserved interactions with the covalent butenolide modification promote transition to the active state in both AtD14 (non-parasite) and ShHTL7 (parasite). Finally, we demonstrate that the enhanced activation of ShHTL7 likely results from disruption of ShHTL7-specific histidine interactions that inhibited activation in the apo case. These results provide a possible explanation for difference in strigolactone sensitivity seen between different strigolactone-sensitive proteins and can be used to aid the design of selective modulators to control Striga parasites.
AB - The parasitic weed Striga has led to billions of dollars’ worth of agricultural productivity loss worldwide. Striga detects host plants using compounds of the strigolactone class of phytohormones. Early steps in the strigolactone signaling pathway involve substrate binding and hydrolysis followed by a conformational change to an “active” or “closed” state, after which it associates with a MAX2-family downstream signaling partner. The structures of the inactive and active states of strigolactone receptors are known through X-ray crystallography, and the transition pathway from the inactive to active state in apo receptors has previously been characterized using molecular dynamics simulations. However, it also has been suggested that a covalent butenolide modification of the receptor on the catalytic histidine through substrate hydrolysis promotes formation of the active state. Using molecular dynamics simulations, we show that the presence of the covalent butenolide enhances activation in both AtD14, a receptor found in Arabidopsis, and ShHTL7, a receptor found in Striga, but the enhancement is ∼50 times greater in ShHTL7. We also show that several conserved interactions with the covalent butenolide modification promote transition to the active state in both AtD14 (non-parasite) and ShHTL7 (parasite). Finally, we demonstrate that the enhanced activation of ShHTL7 likely results from disruption of ShHTL7-specific histidine interactions that inhibited activation in the apo case. These results provide a possible explanation for difference in strigolactone sensitivity seen between different strigolactone-sensitive proteins and can be used to aid the design of selective modulators to control Striga parasites.
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U2 - 10.1016/j.bpj.2023.02.012
DO - 10.1016/j.bpj.2023.02.012
M3 - Article
C2 - 36798027
AN - SCOPUS:85149894941
SN - 0006-3495
VL - 122
SP - 1219
EP - 1228
JO - Biophysical journal
JF - Biophysical journal
IS - 7
ER -