Dynamic model-driven parallel I/O performance tuning

Babak Behzad, Surendra Byna, Stefan M. Wild, Prabhat, Marc Snir

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Abstract

Parallel I/O performance depends highly on the interactions among multiple layers of the parallel I/O stack. The most common layers include high-level I/O libraries, MPI-IO middleware, and parallel file system. Each of these layers offers various tunable parameters to control intermediary data transfer points and the final data layout. Due to the interdependencies and the number of combinations of parameters, finding a good set of parameter values for a specific application's I/O pattern is challenging. Recent efforts, such as autotuning with genetic algorithms (GAs) and analytical models, have several limitations. For instance, analytical models fail to capture the dynamic nature of shared supercomputing systems and are application-specific. GA-based tuning requires running many time-consuming experiments for each input size. In this paper, we present a strategy to generate automatically an empirical model for a given application pattern. Using a set of real measurements from running an I/O kernel as training set, we generate a nonlinear regression model. We use this model to predict the top-20 tunable parameter values that give efficient I/O performance and rerun the I/O kernel to select the best set of parameter under the current conditions as tunable parameters for future runs of the same I/O kernel. Using this approach, we demonstrate 6X - 94X speedup over default I/O time for different I/O kernels running on multiple HPC systems. We also evaluate performance by identifying interdependencies among different sets of tunable parameters.

Original languageEnglish (US)
Title of host publicationProceedings - 2015 IEEE International Conference on Cluster Computing, CLUSTER 2015
PublisherInstitute of Electrical and Electronics Engineers Inc.
Pages184-193
Number of pages10
ISBN (Electronic)9781467365987
DOIs
StatePublished - Oct 26 2015
EventIEEE International Conference on Cluster Computing, CLUSTER 2015 - Chicago, United States
Duration: Sep 8 2015Sep 11 2015

Publication series

NameProceedings - IEEE International Conference on Cluster Computing, ICCC
Volume2015-October
ISSN (Print)1552-5244

Other

OtherIEEE International Conference on Cluster Computing, CLUSTER 2015
CountryUnited States
CityChicago
Period9/8/159/11/15

Keywords

  • Parallel I/O
  • Parallel I/O Tuning
  • Performance Modeling
  • Performance Optimization

ASJC Scopus subject areas

  • Software
  • Hardware and Architecture
  • Signal Processing

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  • Cite this

    Behzad, B., Byna, S., Wild, S. M., Prabhat, & Snir, M. (2015). Dynamic model-driven parallel I/O performance tuning. In Proceedings - 2015 IEEE International Conference on Cluster Computing, CLUSTER 2015 (pp. 184-193). [7307584] (Proceedings - IEEE International Conference on Cluster Computing, ICCC; Vol. 2015-October). Institute of Electrical and Electronics Engineers Inc.. https://doi.org/10.1109/CLUSTER.2015.37