TY - JOUR
T1 - Coaction of Electrostatic an Hyrophobic Interactions
T2 - Dynamic Constraints on Disorere TrkA Juxtamembrane Domain
AU - Wang, Zichen
AU - Fan, Huaxun
AU - Hu, Xiao
AU - Khamo, John
AU - Diao, Jiajie
AU - Zhang, Kai
AU - Pogorelov, Taras V.
N1 - Publisher Copyright:
Copyright © 2019 American Chemical Society.
PY - 2019/12/19
Y1 - 2019/12/19
N2 - In the receptor tyrosine kinase family, conformational change inuce by ligan bining is transmitte across the membrane via a single transmembrane helix an a flexible juxtamembrane omain (JMD). Membrane ynamics makes it challenging to stuy the structural mechanism of receptor activation experimentally. In this stuy, we employ all-atom molecular ynamics with highly mobile membrane mimetic (HMMM) to capture the native conformation of the JMD in tropomyosin receptor kinase A (TrkA). We fin that phosphatiylinositol 4,5-bisphosphate (PIP2) lipis engage in stable bining with multiple basic resiues. Anionic lipis can compete with salt briges within the peptie an alter TrkA-JMD conformation. We iscover three-resiue insertion into the membrane an are able to either enhance or reuce the level of insertion through computationally-esigne point mutations. The vesicle-bining experiment supports computational results an inicates that hyrophobic insertion is comparable to electrostatic bining for membrane anchoring. Biochemical assays on cell lines with mutate TrkA show that enhance TrkA-JMD insertion promotes receptor egraation but oes not affect the short-term signaling capacity. Our joint work points to a scenario where lipi heagroups an tails interact with basic an hyrophobic resiues on isorere omain, respectively, to restrain flexibility an potentially moulate protein function.
AB - In the receptor tyrosine kinase family, conformational change inuce by ligan bining is transmitte across the membrane via a single transmembrane helix an a flexible juxtamembrane omain (JMD). Membrane ynamics makes it challenging to stuy the structural mechanism of receptor activation experimentally. In this stuy, we employ all-atom molecular ynamics with highly mobile membrane mimetic (HMMM) to capture the native conformation of the JMD in tropomyosin receptor kinase A (TrkA). We fin that phosphatiylinositol 4,5-bisphosphate (PIP2) lipis engage in stable bining with multiple basic resiues. Anionic lipis can compete with salt briges within the peptie an alter TrkA-JMD conformation. We iscover three-resiue insertion into the membrane an are able to either enhance or reuce the level of insertion through computationally-esigne point mutations. The vesicle-bining experiment supports computational results an inicates that hyrophobic insertion is comparable to electrostatic bining for membrane anchoring. Biochemical assays on cell lines with mutate TrkA show that enhance TrkA-JMD insertion promotes receptor egraation but oes not affect the short-term signaling capacity. Our joint work points to a scenario where lipi heagroups an tails interact with basic an hyrophobic resiues on isorere omain, respectively, to restrain flexibility an potentially moulate protein function.
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U2 - 10.1021/acs.jpcb.9b09352
DO - 10.1021/acs.jpcb.9b09352
M3 - Article
C2 - 31751135
AN - SCOPUS:85076631300
SN - 1520-6106
VL - 123
SP - 10709
EP - 10717
JO - Journal of Physical Chemistry B
JF - Journal of Physical Chemistry B
IS - 50
ER -