TY - JOUR
T1 - Censored data considerations and analytical approaches for salivary bioscience data
AU - Ahmadi, Hedyeh
AU - Granger, Douglas A.
AU - Hamilton, Katrina R.
AU - Blair, Clancy
AU - Riis, Jenna L.
N1 - Funding Information:
We thank Kaitlin Smith, Hillary Piccerillo, Tatum Stauffer, and Andrew Huang for technical assistance with salivary biospecimen testing. We would like to express our gratitude to all of the families, participants, and teachers who participated in this research and to the Family Life Project (FLP) research assistants for their hard work and dedication to the FLP. This study is part of the Family Life Project (https://flp.fpg.unc.edu/). In the interest of full disclosure, DAG is founder and Chief Scientific and Strategy Advisor at Salimetrics LLC and Salivabio LLC. These relationships are managed by the policies of the committees on conflict of interest at the Johns Hopkins University School of Medicine and the University of California at Irvine.
Funding Information:
The research reported in this publication was supported by the Environmental influences on Child Health Outcomes (ECHO) program, Office of The Director, National Institutes of Health Award Number 1UG3OD023332 and NICHD Award Number R01HD081252.
Publisher Copyright:
© 2021 The Authors
PY - 2021/7
Y1 - 2021/7
N2 - Left censoring in salivary bioscience data occurs when salivary analyte determinations fall below the lower limit of an assay's measurement range. Conventional statistical approaches for addressing censored values (i.e., recoding as missing, substituting or extrapolating values) may introduce systematic bias. While specialized censored data statistical approaches (i.e., Maximum Likelihood Estimation, Regression on Ordered Statistics, Kaplan-Meier, and general Tobit regression) are available, these methods are rarely implemented in biobehavioral studies that examine salivary biomeasures, and their application to salivary data analysis may be hindered by their sensitivity to skewed data distributions, outliers, and sample size. This study compares descriptive statistics, correlation coefficients, and regression parameter estimates generated via conventional and specialized censored data approaches using salivary C-reactive protein data. We assess differences in statistical estimates across approach and across two levels of censoring (9% and 15%) and examine the sensitivity of our results to sample size. Overall, findings were similar across conventional and censored data approaches, but the implementation of specialized censored data approaches was more efficient (i.e., required little manipulations to the raw analyte data) and appropriate. Based on our review of the findings, we outline preliminary recommendations to enable investigators to more efficiently and effectively reduce statistical bias when working with left-censored salivary biomeasure data.
AB - Left censoring in salivary bioscience data occurs when salivary analyte determinations fall below the lower limit of an assay's measurement range. Conventional statistical approaches for addressing censored values (i.e., recoding as missing, substituting or extrapolating values) may introduce systematic bias. While specialized censored data statistical approaches (i.e., Maximum Likelihood Estimation, Regression on Ordered Statistics, Kaplan-Meier, and general Tobit regression) are available, these methods are rarely implemented in biobehavioral studies that examine salivary biomeasures, and their application to salivary data analysis may be hindered by their sensitivity to skewed data distributions, outliers, and sample size. This study compares descriptive statistics, correlation coefficients, and regression parameter estimates generated via conventional and specialized censored data approaches using salivary C-reactive protein data. We assess differences in statistical estimates across approach and across two levels of censoring (9% and 15%) and examine the sensitivity of our results to sample size. Overall, findings were similar across conventional and censored data approaches, but the implementation of specialized censored data approaches was more efficient (i.e., required little manipulations to the raw analyte data) and appropriate. Based on our review of the findings, we outline preliminary recommendations to enable investigators to more efficiently and effectively reduce statistical bias when working with left-censored salivary biomeasure data.
KW - C-reactive protein
KW - Censored data
KW - Saliva
KW - Statistical analysis
KW - Tobit regression
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U2 - 10.1016/j.psyneuen.2021.105274
DO - 10.1016/j.psyneuen.2021.105274
M3 - Article
C2 - 34030086
AN - SCOPUS:85106870719
SN - 0306-4530
VL - 129
JO - Psychoneuroendocrinology
JF - Psychoneuroendocrinology
M1 - 105274
ER -