Brown marmorated stink bug, Halyomorpha halys (Stål), genome: Putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest

Michael E. Sparks; Raman Bansal; Joshua B. Benoit; Michael B. Blackburn; Hsu Chao; Mengyao Chen; Sammy Cheng; Christopher Childers; Huyen Dinh; Harsha Vardhan Doddapaneni; Shannon Dugan; Elena N. Elpidina; David W. Farrow; Markus Friedrich; Richard A. Gibbs; Brantley Hall; Yi Han; Richard W. Hardy; Christopher J. Holmes; Daniel S.T. Hughes; Panagiotis Ioannidis; Alys M. Cheatle Jarvela; J. Spencer Johnston; Jeffery W. Jones; Brent A. Kronmiller; Faith Kung; Sandra L. Lee; Alexander G. Martynov; Patrick Masterson; Florian Maumus; Monica Munoz-Torres; Shwetha C. Murali; Terence D. Murphy; Donna M. Muzny; David R. Nelson; Brenda Oppert; Kristen A. Panfilio; Débora Pires Paula; Leslie Pick; Monica F. Poelchau; Jiaxin Qu; Katie Reding; Joshua H. Rhoades; Adelaide Rhodes; Stephen Richards; Rose Richter; Hugh M. Robertson; Andrew J. Rosendale; Zhijian Jake Tu; Arun S. Velamuri; Robert M. Waterhouse; Matthew T. Weirauch; Jackson T. Wells; John H. Werren; Kim C. Worley; Evgeny M. Zdobnov; Dawn E. Gundersen-Rindal

doi:10.1186/s12864-020-6510-7

Brown marmorated stink bug, Halyomorpha halys (Stål), genome: Putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest

Michael E. Sparks, Raman Bansal, Joshua B. Benoit, Michael B. Blackburn, Hsu Chao, Mengyao Chen, Sammy Cheng, Christopher Childers, Huyen Dinh, Harsha Vardhan Doddapaneni, Shannon Dugan, Elena N. Elpidina, David W. Farrow, Markus Friedrich, Richard A. Gibbs, Brantley Hall, Yi Han, Richard W. Hardy, Christopher J. Holmes, Daniel S.T. HughesPanagiotis Ioannidis, Alys M. Cheatle Jarvela, J. Spencer Johnston, Jeffery W. Jones, Brent A. Kronmiller, Faith Kung, Sandra L. Lee, Alexander G. Martynov, Patrick Masterson, Florian Maumus, Monica Munoz-Torres, Shwetha C. Murali, Terence D. Murphy, Donna M. Muzny, David R. Nelson, Brenda Oppert, Kristen A. Panfilio, Débora Pires Paula, Leslie Pick, Monica F. Poelchau, Jiaxin Qu, Katie Reding, Joshua H. Rhoades, Adelaide Rhodes, Stephen Richards, Rose Richter, Hugh M. Robertson, Andrew J. Rosendale, Zhijian Jake Tu, Arun S. Velamuri, Robert M. Waterhouse, Matthew T. Weirauch, Jackson T. Wells, John H. Werren, Kim C. Worley, Evgeny M. Zdobnov, Dawn E. Gundersen-Rindal

Entomology

Research output: Contribution to journal › Article › peer-review

Abstract

Background: Halyomorpha halys (Stål), the brown marmorated stink bug, is a highly invasive insect species due in part to its exceptionally high levels of polyphagy. This species is also a nuisance due to overwintering in human-made structures. It has caused significant agricultural losses in recent years along the Atlantic seaboard of North America and in continental Europe. Genomic resources will assist with determining the molecular basis for this species' feeding and habitat traits, defining potential targets for pest management strategies. Results: Analysis of the 1.15-Gb draft genome assembly has identified a wide variety of genetic elements underpinning the biological characteristics of this formidable pest species, encompassing the roles of sensory functions, digestion, immunity, detoxification and development, all of which likely support H. halys' capacity for invasiveness. Many of the genes identified herein have potential for biomolecular pesticide applications. Conclusions: Availability of the H. halys genome sequence will be useful for the development of environmentally friendly biomolecular pesticides to be applied in concert with more traditional, synthetic chemical-based controls.

Original language	English (US)
Article number	227
Journal	BMC genomics
Volume	21
Issue number	1
DOIs	https://doi.org/10.1186/s12864-020-6510-7
State	Published - Mar 14 2020

Keywords

Brown marmorated stink bug genome
Pentatomid genomics
cathepsins
chemoreceptors
invasive species
odorant binding proteins
opsins
polyphagy
xenobiotic detoxification

ASJC Scopus subject areas

Biotechnology
Genetics

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10.1186/s12864-020-6510-7

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Sparks, M. E., Bansal, R., Benoit, J. B., Blackburn, M. B., Chao, H., Chen, M., Cheng, S., Childers, C., Dinh, H., Doddapaneni, H. V., Dugan, S., Elpidina, E. N., Farrow, D. W., Friedrich, M., Gibbs, R. A., Hall, B., Han, Y., Hardy, R. W., Holmes, C. J., ... Gundersen-Rindal, D. E. (2020). Brown marmorated stink bug, Halyomorpha halys (Stål), genome: Putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest. BMC genomics, 21(1), Article 227. https://doi.org/10.1186/s12864-020-6510-7

Sparks, ME, Bansal, R, Benoit, JB, Blackburn, MB, Chao, H, Chen, M, Cheng, S, Childers, C, Dinh, H, Doddapaneni, HV, Dugan, S, Elpidina, EN, Farrow, DW, Friedrich, M, Gibbs, RA, Hall, B, Han, Y, Hardy, RW, Holmes, CJ, Hughes, DST, Ioannidis, P, Cheatle Jarvela, AM, Johnston, JS, Jones, JW, Kronmiller, BA, Kung, F, Lee, SL, Martynov, AG, Masterson, P, Maumus, F, Munoz-Torres, M, Murali, SC, Murphy, TD, Muzny, DM, Nelson, DR, Oppert, B, Panfilio, KA, Paula, DP, Pick, L, Poelchau, MF, Qu, J, Reding, K, Rhoades, JH, Rhodes, A, Richards, S, Richter, R, Robertson, HM, Rosendale, AJ, Tu, ZJ, Velamuri, AS, Waterhouse, RM, Weirauch, MT, Wells, JT, Werren, JH, Worley, KC, Zdobnov, EM & Gundersen-Rindal, DE 2020, 'Brown marmorated stink bug, Halyomorpha halys (Stål), genome: Putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest', BMC genomics, vol. 21, no. 1, 227. https://doi.org/10.1186/s12864-020-6510-7

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title = "Brown marmorated stink bug, Halyomorpha halys (St{\aa}l), genome: Putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest",

abstract = "Background: Halyomorpha halys (St{\aa}l), the brown marmorated stink bug, is a highly invasive insect species due in part to its exceptionally high levels of polyphagy. This species is also a nuisance due to overwintering in human-made structures. It has caused significant agricultural losses in recent years along the Atlantic seaboard of North America and in continental Europe. Genomic resources will assist with determining the molecular basis for this species' feeding and habitat traits, defining potential targets for pest management strategies. Results: Analysis of the 1.15-Gb draft genome assembly has identified a wide variety of genetic elements underpinning the biological characteristics of this formidable pest species, encompassing the roles of sensory functions, digestion, immunity, detoxification and development, all of which likely support H. halys' capacity for invasiveness. Many of the genes identified herein have potential for biomolecular pesticide applications. Conclusions: Availability of the H. halys genome sequence will be useful for the development of environmentally friendly biomolecular pesticides to be applied in concert with more traditional, synthetic chemical-based controls.",

keywords = "Brown marmorated stink bug genome, Pentatomid genomics, cathepsins, chemoreceptors, invasive species, odorant binding proteins, opsins, polyphagy, xenobiotic detoxification",

author = "Sparks, {Michael E.} and Raman Bansal and Benoit, {Joshua B.} and Blackburn, {Michael B.} and Hsu Chao and Mengyao Chen and Sammy Cheng and Christopher Childers and Huyen Dinh and Doddapaneni, {Harsha Vardhan} and Shannon Dugan and Elpidina, {Elena N.} and Farrow, {David W.} and Markus Friedrich and Gibbs, {Richard A.} and Brantley Hall and Yi Han and Hardy, {Richard W.} and Holmes, {Christopher J.} and Hughes, {Daniel S.T.} and Panagiotis Ioannidis and {Cheatle Jarvela}, {Alys M.} and Johnston, {J. Spencer} and Jones, {Jeffery W.} and Kronmiller, {Brent A.} and Faith Kung and Lee, {Sandra L.} and Martynov, {Alexander G.} and Patrick Masterson and Florian Maumus and Monica Munoz-Torres and Murali, {Shwetha C.} and Murphy, {Terence D.} and Muzny, {Donna M.} and Nelson, {David R.} and Brenda Oppert and Panfilio, {Kristen A.} and Paula, {D{\'e}bora Pires} and Leslie Pick and Poelchau, {Monica F.} and Jiaxin Qu and Katie Reding and Rhoades, {Joshua H.} and Adelaide Rhodes and Stephen Richards and Rose Richter and Robertson, {Hugh M.} and Rosendale, {Andrew J.} and Tu, {Zhijian Jake} and Velamuri, {Arun S.} and Waterhouse, {Robert M.} and Weirauch, {Matthew T.} and Wells, {Jackson T.} and Werren, {John H.} and Worley, {Kim C.} and Zdobnov, {Evgeny M.} and Gundersen-Rindal, {Dawn E.}",

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year = "2020",

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doi = "10.1186/s12864-020-6510-7",

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T2 - Putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest

AU - Sparks, Michael E.

AU - Bansal, Raman

AU - Benoit, Joshua B.

AU - Blackburn, Michael B.

AU - Chao, Hsu

AU - Chen, Mengyao

AU - Cheng, Sammy

AU - Childers, Christopher

AU - Dinh, Huyen

AU - Doddapaneni, Harsha Vardhan

AU - Dugan, Shannon

AU - Elpidina, Elena N.

AU - Farrow, David W.

AU - Friedrich, Markus

AU - Gibbs, Richard A.

AU - Hall, Brantley

AU - Han, Yi

AU - Hardy, Richard W.

AU - Holmes, Christopher J.

AU - Hughes, Daniel S.T.

AU - Ioannidis, Panagiotis

AU - Cheatle Jarvela, Alys M.

AU - Johnston, J. Spencer

AU - Jones, Jeffery W.

AU - Kronmiller, Brent A.

AU - Kung, Faith

AU - Lee, Sandra L.

AU - Martynov, Alexander G.

AU - Masterson, Patrick

AU - Maumus, Florian

AU - Munoz-Torres, Monica

AU - Murali, Shwetha C.

AU - Murphy, Terence D.

AU - Muzny, Donna M.

AU - Nelson, David R.

AU - Oppert, Brenda

AU - Panfilio, Kristen A.

AU - Paula, Débora Pires

AU - Pick, Leslie

AU - Poelchau, Monica F.

AU - Qu, Jiaxin

AU - Reding, Katie

AU - Rhoades, Joshua H.

AU - Rhodes, Adelaide

AU - Richards, Stephen

AU - Richter, Rose

AU - Robertson, Hugh M.

AU - Rosendale, Andrew J.

AU - Tu, Zhijian Jake

AU - Velamuri, Arun S.

AU - Waterhouse, Robert M.

AU - Weirauch, Matthew T.

AU - Wells, Jackson T.

AU - Werren, John H.

AU - Worley, Kim C.

AU - Zdobnov, Evgeny M.

AU - Gundersen-Rindal, Dawn E.

PY - 2020/3/14

Y1 - 2020/3/14

N2 - Background: Halyomorpha halys (Stål), the brown marmorated stink bug, is a highly invasive insect species due in part to its exceptionally high levels of polyphagy. This species is also a nuisance due to overwintering in human-made structures. It has caused significant agricultural losses in recent years along the Atlantic seaboard of North America and in continental Europe. Genomic resources will assist with determining the molecular basis for this species' feeding and habitat traits, defining potential targets for pest management strategies. Results: Analysis of the 1.15-Gb draft genome assembly has identified a wide variety of genetic elements underpinning the biological characteristics of this formidable pest species, encompassing the roles of sensory functions, digestion, immunity, detoxification and development, all of which likely support H. halys' capacity for invasiveness. Many of the genes identified herein have potential for biomolecular pesticide applications. Conclusions: Availability of the H. halys genome sequence will be useful for the development of environmentally friendly biomolecular pesticides to be applied in concert with more traditional, synthetic chemical-based controls.

AB - Background: Halyomorpha halys (Stål), the brown marmorated stink bug, is a highly invasive insect species due in part to its exceptionally high levels of polyphagy. This species is also a nuisance due to overwintering in human-made structures. It has caused significant agricultural losses in recent years along the Atlantic seaboard of North America and in continental Europe. Genomic resources will assist with determining the molecular basis for this species' feeding and habitat traits, defining potential targets for pest management strategies. Results: Analysis of the 1.15-Gb draft genome assembly has identified a wide variety of genetic elements underpinning the biological characteristics of this formidable pest species, encompassing the roles of sensory functions, digestion, immunity, detoxification and development, all of which likely support H. halys' capacity for invasiveness. Many of the genes identified herein have potential for biomolecular pesticide applications. Conclusions: Availability of the H. halys genome sequence will be useful for the development of environmentally friendly biomolecular pesticides to be applied in concert with more traditional, synthetic chemical-based controls.

KW - Brown marmorated stink bug genome

KW - Pentatomid genomics

KW - cathepsins

KW - chemoreceptors

KW - invasive species

KW - odorant binding proteins

KW - opsins

KW - polyphagy

KW - xenobiotic detoxification

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Brown marmorated stink bug, Halyomorpha halys (Stål), genome: Putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest

Abstract

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