TY - JOUR
T1 - BirdFlow
T2 - Learning seasonal bird movements from eBird data
AU - Fuentes, Miguel
AU - Fink, Daniel
AU - Sheldon, Daniel
AU - Van Doren, Benjamin Mark
N1 - We are grateful to the eBird Status & Trends team. We thank Tom Auer and Adriaan Dokter for assistance and feedback on our work, and Rob Bierregaard, Autumn-Lynn Harrison and Michael N. Kochert for permission to use tracking data in this study. This material is based upon work supported by the National Science Foundation under Grant Nos. 2210979, 1749854, and 1661259. The work of BMVD was supported by a Cornell Presidential Postdoctoral Fellowship. We thank the Leon Levy Foundation; The Wolf Creek Charitable Foundation; NSF DBI-1939187. Computing support was provided by the NSF CNS-1059284 and CCF-1522054, and the Extreme Science and Engineering Discovery Environment (XSEDE) NSF ACI-1548562, through allocation TG-DEB200010 run on Bridges at the Pittsburgh Supercomputing Center. Additional computing efforts were performed with equipment obtained under a grant from the Collaborative R&D Fund managed by the Massachusetts Technology Collaborative.
We are grateful to the eBird Status & Trends team. We thank Tom Auer and Adriaan Dokter for assistance and feedback on our work, and Rob Bierregaard, Autumn‐Lynn Harrison and Michael N. Kochert for permission to use tracking data in this study. This material is based upon work supported by the National Science Foundation under Grant Nos. 2210979, 1749854, and 1661259. The work of BMVD was supported by a Cornell Presidential Postdoctoral Fellowship. We thank the Leon Levy Foundation; The Wolf Creek Charitable Foundation; NSF DBI‐1939187. Computing support was provided by the NSF CNS‐1059284 and CCF‐1522054, and the Extreme Science and Engineering Discovery Environment (XSEDE) NSF ACI‐1548562, through allocation TG‐DEB200010 run on Bridges at the Pittsburgh Supercomputing Center. Additional computing efforts were performed with equipment obtained under a grant from the Collaborative R&D Fund managed by the Massachusetts Technology Collaborative.
PY - 2023/3
Y1 - 2023/3
N2 - Large-scale monitoring of seasonal animal movement is integral to science, conservation and outreach. However, gathering representative movement data across entire species ranges is frequently intractable. Citizen science databases collect millions of animal observations throughout the year, but it is challenging to infer individual movement behaviour solely from observational data. We present BirdFlow, a probabilistic modelling framework that draws on citizen science data from the eBird database to model the population flows of migratory birds. We apply the model to 11 species of North American birds, using GPS and satellite tracking data to tune and evaluate model performance. We show that BirdFlow models can accurately infer individual seasonal movement behaviour directly from eBird relative abundance estimates. Supplementing the model with a sample of tracking data from wild birds improves performance. Researchers can extract a number of behavioural inferences from model results, including migration routes, timing, connectivity and forecasts. The BirdFlow framework has the potential to advance migration ecology research, boost insights gained from direct tracking studies and serve a number of applied functions in conservation, disease surveillance, aviation and public outreach.
AB - Large-scale monitoring of seasonal animal movement is integral to science, conservation and outreach. However, gathering representative movement data across entire species ranges is frequently intractable. Citizen science databases collect millions of animal observations throughout the year, but it is challenging to infer individual movement behaviour solely from observational data. We present BirdFlow, a probabilistic modelling framework that draws on citizen science data from the eBird database to model the population flows of migratory birds. We apply the model to 11 species of North American birds, using GPS and satellite tracking data to tune and evaluate model performance. We show that BirdFlow models can accurately infer individual seasonal movement behaviour directly from eBird relative abundance estimates. Supplementing the model with a sample of tracking data from wild birds improves performance. Researchers can extract a number of behavioural inferences from model results, including migration routes, timing, connectivity and forecasts. The BirdFlow framework has the potential to advance migration ecology research, boost insights gained from direct tracking studies and serve a number of applied functions in conservation, disease surveillance, aviation and public outreach.
KW - big data
KW - bird migration
KW - forecasting
KW - graphical models
KW - movement ecology
KW - species distributions
UR - http://www.scopus.com/inward/record.url?scp=85147386910&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85147386910&partnerID=8YFLogxK
U2 - 10.1111/2041-210X.14052
DO - 10.1111/2041-210X.14052
M3 - Article
AN - SCOPUS:85147386910
SN - 2041-210X
VL - 14
SP - 923
EP - 938
JO - Methods in Ecology and Evolution
JF - Methods in Ecology and Evolution
IS - 3
ER -