TY - JOUR
T1 - Biodiversity into your hands - A call for a virtual global natural history 'metacollection'
AU - Balke, Michael
AU - Schmidt, Stefan
AU - Hausmann, Axel
AU - Toussaint, Emmanuel F.A.
AU - Bergsten, Johannes
AU - Buffington, Matthew
AU - Häuser, Christoph L.
AU - Kroupa, Alexander
AU - Hagedorn, Gregor
AU - Riedel, Alexander
AU - Polaszek, Andrew
AU - Ubaidillah, Rosichon
AU - Krogmann, Lars
AU - Zwick, Andreas
AU - Fikáček, Martin
AU - Hájek, Jiří
AU - Michat, Mariano C.
AU - Dietrich, Christopher
AU - La Salle, John
AU - Mantle, Beth
AU - Ng, Peter K.L.
AU - Hobern, Donald
N1 - Funding Information:
This project was made possible with the help of BMBF GBIF grant 01LI1001B. Support was also granted by the European Union’s 7th Framework Programme (FP7/2007-2013) with the projects 4D4Life (grant agreement №238988) and pro-iBiosphere (grant agreement №312848) and by the EFRE EoS project at MFN Berlin. We thank Dr John Ascher (National University of Singapore) for many helpful comments which improved this manuscript considerably, and Vojtech Novotny for his encouragement.
PY - 2013/9/17
Y1 - 2013/9/17
N2 - Background: Many scientific disciplines rely on correct taxon delineations and identifications. So does a great part of the general public as well as decision makers. Researchers, students and enthusiastic amateurs often feel frustrated because information about species remains scattered, difficult to access, or difficult to decipher. Together, this affects almost anyone who wishes to identify species or verify identifications. Many remedies have been proposed, but we argue that the role of natural history collections remains insufficiently appreciated. We suggest using state-of-the-art mass imaging technology and to join forces to create a global natural history metacollection on the internet, providing access to the morphology of tens of millions of specimens and making them available for automated digital image analysis.Discussion: Robotic high-resolution imaging technology and fast (high performance) computer-based image stitching make it now feasible to digitize entire collection drawers typically used for arthropod collections, or trays or containers used for other objects. Resolutions of 500 megapixels and much higher are already utilized to capture the contents of 40x50 cm collection drawers, providing amazing detail of specimens. Flanked by metadata entry, this helps to create access to tens of thousands of specimens in days. By setting priorities and combining the holdings of the most comprehensive collections for certain taxa, drawer digitizing offers the unique opportunity to create a global, virtual metacollection.The taxonomic and geographic coverage of such a collection could never be achieved by a single institution or individual. We argue that by joining forces, many new impulses will emerge for systematic biology, related fields and understanding of biodiversity in general.Digitizing drawers containing unidentified, little-curated specimens is a contribution towards the beginning of a new era of online curation. It also will help taxonomists and curators to discover and process the millions of " gems" of undescribed species hidden in museum accessions.Summary: Our proposal suggests creating virtual, high-resolution image resources that will, for the first time in history, provide access for expert scientists as well as students and the general public to the enormous wealth of the world's natural history collections. We foresee that this will contribute to a better understanding, appreciation and increased use of biodiversity resources and the natural history collections serving this cause.
AB - Background: Many scientific disciplines rely on correct taxon delineations and identifications. So does a great part of the general public as well as decision makers. Researchers, students and enthusiastic amateurs often feel frustrated because information about species remains scattered, difficult to access, or difficult to decipher. Together, this affects almost anyone who wishes to identify species or verify identifications. Many remedies have been proposed, but we argue that the role of natural history collections remains insufficiently appreciated. We suggest using state-of-the-art mass imaging technology and to join forces to create a global natural history metacollection on the internet, providing access to the morphology of tens of millions of specimens and making them available for automated digital image analysis.Discussion: Robotic high-resolution imaging technology and fast (high performance) computer-based image stitching make it now feasible to digitize entire collection drawers typically used for arthropod collections, or trays or containers used for other objects. Resolutions of 500 megapixels and much higher are already utilized to capture the contents of 40x50 cm collection drawers, providing amazing detail of specimens. Flanked by metadata entry, this helps to create access to tens of thousands of specimens in days. By setting priorities and combining the holdings of the most comprehensive collections for certain taxa, drawer digitizing offers the unique opportunity to create a global, virtual metacollection.The taxonomic and geographic coverage of such a collection could never be achieved by a single institution or individual. We argue that by joining forces, many new impulses will emerge for systematic biology, related fields and understanding of biodiversity in general.Digitizing drawers containing unidentified, little-curated specimens is a contribution towards the beginning of a new era of online curation. It also will help taxonomists and curators to discover and process the millions of " gems" of undescribed species hidden in museum accessions.Summary: Our proposal suggests creating virtual, high-resolution image resources that will, for the first time in history, provide access for expert scientists as well as students and the general public to the enormous wealth of the world's natural history collections. We foresee that this will contribute to a better understanding, appreciation and increased use of biodiversity resources and the natural history collections serving this cause.
KW - Accessions
KW - Collection access
KW - Cybertaxonomy
KW - DNA extraction vouchers
KW - Mass digitization
KW - Metacollection
KW - Natural history collections
KW - Online resources
KW - Robotic imaging
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U2 - 10.1186/1742-9994-10-55
DO - 10.1186/1742-9994-10-55
M3 - Comment/debate
C2 - 24044698
AN - SCOPUS:84883898434
SN - 1742-9994
VL - 10
JO - Frontiers in Zoology
JF - Frontiers in Zoology
IS - 1
M1 - 55
ER -