An Engineered Switch in T Cell Receptor Specificity Leads to an Unusual but Functional Binding Geometry

Daniel T Harris, Nishant K K. Singh, Qi Cai, Sheena N N. Smith, Craig W W. Vander Kooi, Erik Procko, David M Kranz, Brian M M. Baker

Research output: Contribution to journalArticle

Abstract

Utilizing a diverse binding site, T cell receptors (TCRs) specifically recognize a composite ligand comprised of a foreign peptide and a major histocompatibility complex protein (MHC). To help understand the determinants of TCR specificity, we studied a parental and engineered receptor whose peptide specificity had been switched via molecular evolution. Altered specificity was associated with a significant change in TCR-binding geometry, but this did not impact the ability of the TCR to signal in an antigen-specific manner. The determinants of binding and specificity were distributed among contact and non-contact residues in germline and hypervariable loops, and included disruption of key TCR-MHC interactions that bias αβ TCRs toward particular binding modes. Sequence-fitness landscapes identified additional mutations that further enhanced specificity. Our results demonstrate that TCR specificity arises from the distributed action of numerous sites throughout the interface, with significant implications for engineering therapeutic TCRs with novel and functional recognition properties.

Original languageEnglish (US)
Pages (from-to)1142-1154
Number of pages13
JournalStructure
Volume24
Issue number7
DOIs
StatePublished - Jul 6 2016

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T-Cell Antigen Receptor Specificity
Major Histocompatibility Complex
Peptide Receptors
Molecular Evolution
Proteins
Binding Sites
Ligands
Antigens
Peptides
Mutation
Therapeutics

ASJC Scopus subject areas

  • Structural Biology
  • Molecular Biology

Cite this

Harris, DT., Singh, NK. K., Cai, Q., Smith, SN. N., Vander Kooi, CW. W., Procko, E., ... Baker, BM. M. (2016). An Engineered Switch in T Cell Receptor Specificity Leads to an Unusual but Functional Binding Geometry. Structure, 24(7), 1142-1154. https://doi.org/10.1016/j.str.2016.04.011

An Engineered Switch in T Cell Receptor Specificity Leads to an Unusual but Functional Binding Geometry. / Harris, Daniel T; Singh, Nishant K K.; Cai, Qi; Smith, Sheena N N.; Vander Kooi, Craig W W.; Procko, Erik; Kranz, David M; Baker, Brian M M.

In: Structure, Vol. 24, No. 7, 06.07.2016, p. 1142-1154.

Research output: Contribution to journalArticle

Harris, DT, Singh, NKK, Cai, Q, Smith, SNN, Vander Kooi, CWW, Procko, E, Kranz, DM & Baker, BMM 2016, 'An Engineered Switch in T Cell Receptor Specificity Leads to an Unusual but Functional Binding Geometry', Structure, vol. 24, no. 7, pp. 1142-1154. https://doi.org/10.1016/j.str.2016.04.011
Harris, Daniel T ; Singh, Nishant K K. ; Cai, Qi ; Smith, Sheena N N. ; Vander Kooi, Craig W W. ; Procko, Erik ; Kranz, David M ; Baker, Brian M M. / An Engineered Switch in T Cell Receptor Specificity Leads to an Unusual but Functional Binding Geometry. In: Structure. 2016 ; Vol. 24, No. 7. pp. 1142-1154.
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