Affinities of recombinant norovirus P dimers for human blood group antigens

Ling Han, Pavel I. Kitov, Elena N. Kitova, Ming Tan, Leyi Wang, Ming Xia, Xi Jiang, John S. Klassen

Research output: Contribution to journalArticlepeer-review


Noroviruses (NoVs), the major cause of viral acute gastroenteritis, recognize histo-blood group antigens (HBGAs) as receptors or attachment factors. To gain a deeper understanding of the interplay between NoVs and their hosts, the affinities of recombinant P dimers (P2's) of a GII.4 NoV (VA387) to a library of 41 soluble analogs of HBGAs were measured using the direct electrospray ionization mass spectrometry assay. The HBGAs contained the A, B, H and Lewis epitopes, with variable sizes (2-6 residues) and different types (1-6). The results reveal that the P2's exhibit a broad specificity for the HBGAs and bind to all of the oligosaccharides tested. Overall, the affinities are relatively low, ranging from 400 to 3000 M-1 and are influenced by the chain type: 3 > 1 ̃ 2 ̃ 4 ̃ 5 ̃ 6 for H antigens; 6 > 1 ̃ 3 ̃ 4 ̃ 5 > 2 for A antigens; 3 > 1 ̃ 4 ̃ 5 ̃ 6 > 2 for B antigens, but not by chain length. The highestaffinity ligands are B type 3 (3000 ± 300 M-1) and A type 6 (2350 ± 60 M-1). While the higher affinity to the type 3 H antigen was previously observed, preferential binding to the types 6 and 3 antigens with A and B epitopes, respectively, has not been previously reported. A truncated P domain dimer (lacking the C-terminal arginine cluster) exhibits similar binding. The central-binding motifs in the HBGAs were identified by molecular-docking simulations.

Original languageEnglish (US)
Pages (from-to)276-285
Number of pages10
Issue number3
StatePublished - Mar 2013
Externally publishedYes


  • Affinity
  • Electrospray ionization mass spectrometry
  • Histo-blood group antigens
  • Norovirus
  • Receptor

ASJC Scopus subject areas

  • Biochemistry


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