Adding evidence type representation to DIDEO

Mathias Brochhausen, William R. Hogan, Philip E. Empey, Jodi Schneider, Richard D. Boyce

Research output: Contribution to journalConference article

Abstract

In this poster we present novel development and extension of the Drug-drug Interaction and Drug-drug Interaction Evidence Ontology (DIDEO). We demonstrate how reasoning over this extension of DIDEO can a) automatically create a multi-level hierarchy of evidence types from descriptions of the underlying scientific observations and b) automatically subsume individual evidence items under the correct evidence type. Thus DIDEO will enable evidence items added manually by curators to be automatically categorized into a drug-drug interaction framework with precision and minimal effort from curators. As with all previous DIDEO development this extension is consistent with OBO Foundry principles.

Original languageEnglish (US)
JournalCEUR Workshop Proceedings
Volume1747
StatePublished - Jan 1 2016
Event2016 Joint International Conference on Biological Ontology and BioCreative - Food, Nutrition, Health and Environment for the 9 Billion, ICBO-BioCreative 2016 - Corvallis, United States
Duration: Aug 1 2016Aug 4 2016

Keywords

  • Biomedical ontologies
  • Drug-drug interaction
  • Evidence types
  • Potential drug-drug interaction

ASJC Scopus subject areas

  • Computer Science(all)

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    Brochhausen, M., Hogan, W. R., Empey, P. E., Schneider, J., & Boyce, R. D. (2016). Adding evidence type representation to DIDEO. CEUR Workshop Proceedings, 1747.