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  • 2020
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  • Joseph Maria Kumar Irudayaraj
2020

Acute PFOA exposure promotes epigenomic alterations in mouse kidney tissues

Rashid, F., Ramakrishnan, A., Fields, C. & Irudayaraj, J., 2020, In : Toxicology Reports. 7, p. 125-132 8 p.

Research output: Contribution to journalArticle

Open Access

Checkpoint enrichment for sensitive detection of target bacteria from large volume of food matrices

Ren, W., Cabush, A. & Irudayaraj, J., Aug 29 2020, In : Analytica Chimica Acta. 1127, p. 114-121 8 p.

Research output: Contribution to journalArticle

Copper mediates mitochondrial biogenesis in retinal pigment epithelial cells

Aloysius Dhivya, M., Aberami, S., Nikhalashree, S., Biswas, J., Liu, W., Irudayaraj, J., Sulochana, K. N., Coral, K. & Bharathi Devi, S. R., Oct 1 2020, In : Biochimica et Biophysica Acta - Molecular Basis of Disease. 1866, 10, 165843.

Research output: Contribution to journalArticle

Effect of Perfluorooctanoic Acid on the Epigenetic and Tight Junction Genes of the Mouse Intestine

Rashid, F., Ahmad, S. & Irudayaraj, J. M. K., Aug 28 2020, In : Toxics. 8, 3, 64.

Research output: Contribution to journalArticle

Open Access

Effect of PFOA on DNA Methylation and Alternative Splicing in Mouse Liver

Wen, Y., Chen, J., Li, J., Arif, W., Kalsotra, A. & Irudayaraj, J., Sep 1 2020, In : Toxicology Letters. 329, p. 38-46 9 p.

Research output: Contribution to journalArticle

Open Access

Epigenetic toxicity of PFOA and GenX in HepG2 cells and their role in lipid metabolism

Wen, Y., Mirji, N. & Irudayaraj, J., Jun 2020, In : Toxicology in Vitro. 65, 104797.

Research output: Contribution to journalArticle

Open Access

Monomeric cohesin state revealed by live-cell single-molecule spectroscopy

Liu, W., Biton, E., Pathania, A., Matityahu, A., Irudayaraj, J. & Onn, I., Feb 5 2020, In : EMBO Reports. 21, 2, e48211.

Research output: Contribution to journalArticle

Multi and transgenerational epigenetic effects of di-(2-ethylhexyl) phthalate (DEHP) in liver

Wen, Y., Rattan, S., Flaws, J. A. & Irudayaraj, J., Sep 1 2020, In : Toxicology and Applied Pharmacology. 402, 115123.

Research output: Contribution to journalArticle

Open Access

Nanoscale Drug Delivery Systems: From Medicine to Agriculture

Vega-Vásquez, P., Mosier, N. S. & Irudayaraj, J., Feb 18 2020, In : Frontiers in Bioengineering and Biotechnology. 8, 79.

Research output: Contribution to journalReview article

Open Access
Open Access
2019

Bioinspired glycosaminoglycan hydrogels via click chemistry for 3D dynamic cell encapsulation

Kuang, L., Damayanti, N. P., Jiang, C., Fei, X., Liu, W., Narayanan, N., Irudayaraj, J., Campanella, O. & Deng, M., Feb 5 2019, In : Journal of Applied Polymer Science. 136, 5, 47212.

Research output: Contribution to journalArticle

Epigenetic biomarker screening by FLIM-FRET for combination therapy in ER+ breast cancer

Liu, W., Cui, Y., Ren, W. & Irudayaraj, J., Jan 30 2019, In : Clinical epigenetics. 11, 1, 16.

Research output: Contribution to journalArticle

Epigenetic Process Monitoring in Live Cultures with Peptide Biosensors

Damayanti, N. P., Buno, K., Voytik Harbin, S. L. & Irudayaraj, J. M. K., Mar 22 2019, In : ACS Sensors. 4, 3, p. 562-565 4 p.

Research output: Contribution to journalArticle

Laser Shock Tuning Dynamic Interlayer Coupling in Graphene-Boron Nitride Moiré Superlattices

Kumar, P., Liu, J., Motlag, M., Tong, L., Hu, Y., Huang, X., Bandopadhyay, A., Pati, S. K., Ye, L., Irudayaraj, J. & Cheng, G. J., Jan 9 2019, In : Nano letters. 19, 1, p. 283-291 9 p.

Research output: Contribution to journalArticle

Magnetic Focus Lateral Flow Sensor for Detection of Cervical Cancer Biomarkers

Ren, W., Mohammed, S. I., Wereley, S. & Irudayaraj, J., Feb 19 2019, In : Analytical chemistry. 91, 4, p. 2876-2884 9 p.

Research output: Contribution to journalArticle

Modulation of gene silencing by Cdc7p via H4 K16 acetylation and phosphorylation of chromatin assembly factor CAF-1 in saccharomyces cerevisiae

Young, T. J., Cui, Y., Irudayaraj, J. & Kirchmaier, A. L., Apr 2019, In : Genetics. 211, 4, p. 1219-1237 19 p.

Research output: Contribution to journalArticle

Plasmonic enhancement in lateral flow sensors for improved sensing of E. coli O157:H7

Ren, W., Ballou, D. R., FitzGerald, R. & Irudayaraj, J., Feb 1 2019, In : Biosensors and Bioelectronics. 126, p. 324-331 8 p.

Research output: Contribution to journalArticle

Prenatal and ancestral exposure to di(2-ethylhexyl) phthalate alters gene expression and DNA methylation in mouse ovaries

Rattan, S., Beers, H. K., Kannan, A., Ramakrishnan, A., Brehm, E., Bagchi, I., Irudayaraj, J. M. K. & Flaws, J. A., Sep 15 2019, In : Toxicology and Applied Pharmacology. 379, 114629.

Research output: Contribution to journalArticle

The transition structure of chromatin fibers at the nanoscale probed by cryogenic electron tomography

Zhou, Z., Li, K., Yan, R., Yu, G., Gilpin, C. J., Jiang, W. & Irudayaraj, J. M. K., Aug 7 2019, In : Nanoscale. 11, 29, p. 13783-13789 7 p.

Research output: Contribution to journalArticle

2018

Alpha Lead Oxide (α-PbO): A New 2D Material with Visible Light Sensitivity

Kumar, P., Liu, J., Ranjan, P., Hu, Y., Yamijala, S. S. R. K. C., Pati, S. K., Irudayaraj, J. & Cheng, G. J., Mar 22 2018, In : Small. 14, 12, 1703346.

Research output: Contribution to journalArticle

An ultrasensitive aptasensor based on fluorescent resonant energy transfer and exonuclease-assisted target recycling for patulin detection

Wu, Z., Xu, E., Jin, Z. & Irudayaraj, J., May 30 2018, In : Food chemistry. 249, p. 136-142 7 p.

Research output: Contribution to journalArticle

Current technologies of electrochemical immunosensors: Perspective on signal amplification

Cho, I. H., Lee, J., Kim, J., Kang, M. S., Paik, J. K., Ku, S., Cho, H. M., Irudayaraj, J. & Kim, D. H., Jan 12 2018, In : Sensors (Switzerland). 18, 1, 207.

Research output: Contribution to journalReview article

Electrospun probiotics: An alternative for encapsulation

Akbar, Z., Zahoor, T., Huma, N., Jamil, A., Ayesha, H. & Irudayaraj, J. M. K., Nov 2018, In : Journal of Biological Regulators and Homeostatic Agents. 32, 6, p. 1551-1556 6 p.

Research output: Contribution to journalArticle

Exploring the anti-quorum sensing activity of a d-limonene nanoemulsion for Escherichia coli O157:H7

Wang, R., Vega, P., Xu, Y., Chen, C. Y. & Irudayaraj, J., Jul 2018, In : Journal of Biomedical Materials Research - Part A. 106, 7, p. 1979-1986 8 p.

Research output: Contribution to journalArticle

Impedimetric detection of bacteria by using a microfluidic chip and silver nanoparticle based signal enhancement

Wang, R., Xu, Y., Sors, T., Irudayaraj, J., Ren, W. & Wang, R., Mar 1 2018, In : Microchimica Acta. 185, 3, 184.

Research output: Contribution to journalArticle

Ultrasound beam steering of oxygen nanobubbles for enhanced bladder cancer therapy

Bhandari, P., Novikova, G., Goergen, C. J. & Irudayaraj, J., Dec 1 2018, In : Scientific reports. 8, 1, 3112.

Research output: Contribution to journalArticle

2017

A net fishing enrichment strategy for colorimetric detection of E. coli O157:H7

Ren, W., Liu, W. & Irudayaraj, J., 2017, In : Sensors and Actuators, B: Chemical. 247, p. 923-929 7 p.

Research output: Contribution to journalArticle

An integrated microsystem with dielectrophoresis enrichment and impedance detection for detection of Escherichia coli

Wang, R., Xu, Y., Liu, H., Peng, J., Irudayaraj, J. & Cui, F., Jun 1 2017, In : Biomedical microdevices. 19, 2, 34.

Research output: Contribution to journalArticle

A reusable laser wrapped graphene-Ag array based SERS sensor for trace detection of genomic DNA methylation

Ouyang, L., Hu, Y., Zhu, L., Cheng, G. J. & Irudayaraj, J., Jun 15 2017, In : Biosensors and Bioelectronics. 92, p. 755-762 8 p.

Research output: Contribution to journalArticle

Basic studies on epigenetic carcinogenesis of low-dose exposure to 1-trichloromethyl-1,2,3,4-tetrahydro-β-carboline (TaClo) in vitro

Wang, R., Cui, Y., Xu, Y. & Irudayaraj, J., Feb 2017, In : PloS one. 12, 2, e0172243.

Research output: Contribution to journalArticle

Bimodal counterpropagating-responsive sensing material for the detection of histamine

Wu, Z., Xu, E., Jiao, A., Jin, Z. & Irudayaraj, J., Jan 1 2017, In : RSC Advances. 7, 71, p. 44933-44944 12 p.

Research output: Contribution to journalArticle

Comparative in vitro toxicity assessment of perfluorinated carboxylic acids

Mahapatra, C. T., Damayanti, N. P., Guffey, S. C., Serafin, J. S., Irudayaraj, J. M. K. & Sepúlveda, M. S., Jun 2017, In : Journal of Applied Toxicology. 37, 6, p. 699-708 10 p.

Research output: Contribution to journalArticle

Electron spin contrast of Purcell-enhanced nitrogen-vacancy ensembles in nanodiamonds

Bogdanov, S., Shalaginov, M. Y., Akimov, A., Lagutchev, A. S., Kapitanova, P., Liu, J., Woods, D., Ferrera, M., Belov, P., Irudayaraj, J., Boltasseva, A. & Shalaev, V. M., Jul 25 2017, In : Physical Review B. 96, 3, 035146.

Research output: Contribution to journalArticle

Epigenetic Editing of Ascl1 Gene in Neural Stem Cells by Optogenetics

Lo, C. L., Choudhury, S. R., Irudayaraj, J. & Zhou, F. C., Feb 9 2017, In : Scientific reports. 7, 42047.

Research output: Contribution to journalArticle

EZH2 modifies sunitinib resistance in renal cell carcinoma by kinome reprogramming

Adelaiye-Ogala, R., Budka, J., Damayanti, N. P., Arrington, J., Ferris, M., Hsu, C. C., Chintala, S., Orillion, A., Miles, K. M., Shen, L., Elbanna, M., Ciamporcero, E., Arisa, S., Pettazzoni, P., Draetta, G. F., Seshadri, M., Hancock, B., Radovich, M., Kota, J., Buck, M. & 9 others, Keilhack, H., McCarthy, B. P., Persohn, S. A., Territo, P. R., Zang, Y., Irudayaraj, J., Tao, W. A., Hollenhorst, P. & Pili, R., Dec 1 2017, In : Cancer Research. 77, 23, p. 6651-6666 16 p.

Research output: Contribution to journalArticle

Highly sensitive fluorescence sensing of zearalenone using a novel aptasensor based on upconverting nanoparticles

Wu, Z., Xu, E., Chughtai, M. F. J., Jin, Z. & Irudayaraj, J., Sep 1 2017, In : Food chemistry. 230, p. 673-680 8 p.

Research output: Contribution to journalArticle

Hypoxia re-programming oxygen nanobubbles sensitize human glioblastoma cells to temozolomide via methylation alterations

Bhandari, P., Lei, O. & Irudayaraj, J., Oct 2017, In : Journal of Bionanoscience. 11, 5, p. 337-345 9 p.

Research output: Contribution to journalArticle

In vivo biodetection using surface-enhanced raman spectroscopy

Lee, S., Kadam, U. S., Craig, A. P. & Irudayaraj, J., Jan 1 2017, Biosensors Based on Nanomaterials and Nanodevices. Li, J. & Wu, N. (eds.). CRC Press, p. 157-178 22 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Monitoring focal adhesion kinase phosphorylation dynamics in live cells

Damayanti, N. P., Buno, K., Narayanan, N., Voytik Harbin, S. L., Deng, M. & Irudayaraj, J. M. K., Aug 7 2017, In : Analyst. 142, 15, p. 2713-2716 4 p.

Research output: Contribution to journalArticle

Multiplex single-cell quantification of rare RNA transcripts from protoplasts in a model plant system

Kadam, U. S., Schulz, B. & Irudayaraj, J. M. K., Jun 2017, In : Plant Journal. 90, 6, p. 1187-1195 9 p.

Research output: Contribution to journalArticle

Optical microscopy and spectroscopy for epigenetic modifications in single living cells

Cui, Y. & Irudayaraj, J., Jan 1 2017, Methods in Pharmacology and Toxicology. Humana Press Inc., p. 135-154 20 p. (Methods in Pharmacology and Toxicology).

Research output: Chapter in Book/Report/Conference proceedingChapter

Oxygen nanobubbles revert hypoxia by methylation programming

Bhandari, P. N., Cui, Y., Elzey, B. D., Goergen, C. J., Long, C. M. & Irudayaraj, J., Dec 1 2017, In : Scientific reports. 7, 1, 9268.

Research output: Contribution to journalArticle

Oxygen Nanobubble Tracking by Light Scattering in Single Cells and Tissues

Bhandari, P., Wang, X. & Irudayaraj, J., Mar 28 2017, In : ACS Nano. 11, 3, p. 2682-2688 7 p.

Research output: Contribution to journalArticle

PLGA-PEG nano-delivery system for epigenetic therapy

Naz, A., Cui, Y., Collins, C. J., Thompson, D. H. & Irudayaraj, J., Jun 1 2017, In : Biomedicine and Pharmacotherapy. 90, p. 586-597 12 p.

Research output: Contribution to journalArticle

Prosperity to challenges: Recent approaches in SERS substrate fabrication

Ouyang, L., Ren, W., Zhu, L. & Irudayaraj, J., Mar 1 2017, In : Reviews in Analytical Chemistry. 36, 1

Research output: Contribution to journalArticle

Real-Time Multiplex Kinase Phosphorylation Sensors in Living Cells

Damayanti, N. P., Buno, K., Cui, Y., Voytik-Harbin, S. L., Pili, R., Freeman, J. & Irudayaraj, J. M. K., Aug 25 2017, In : ACS Sensors. 2, 8, p. 1225-1230 6 p.

Research output: Contribution to journalArticle

Single molecule Raman spectroscopic assay to detect transgene from GM plants

Kadam, U. S., Chavhan, R. L., Schulz, B. & Irudayaraj, J., Sep 1 2017, In : Analytical Biochemistry. 532, p. 60-63 4 p.

Research output: Contribution to journalArticle