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  • 2020
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  • Joseph Maria Kumar Irudayaraj
2020

Acute PFOA exposure promotes epigenomic alterations in mouse kidney tissues

Rashid, F., Ramakrishnan, A., Fields, C. & Irudayaraj, J., 2020, In : Toxicology Reports. 7, p. 125-132 8 p.

Research output: Contribution to journalArticle

Open Access

Checkpoint enrichment for sensitive detection of target bacteria from large volume of food matrices

Ren, W., Cabush, A. & Irudayaraj, J., Aug 29 2020, In : Analytica Chimica Acta. 1127, p. 114-121 8 p.

Research output: Contribution to journalArticle

Copper mediates mitochondrial biogenesis in retinal pigment epithelial cells

Aloysius Dhivya, M., Aberami, S., Nikhalashree, S., Biswas, J., Liu, W., Irudayaraj, J., Sulochana, K. N., Coral, K. & Bharathi Devi, S. R., Oct 1 2020, In : Biochimica et Biophysica Acta - Molecular Basis of Disease. 1866, 10, 165843.

Research output: Contribution to journalArticle

Effect of Perfluorooctanoic Acid on the Epigenetic and Tight Junction Genes of the Mouse Intestine

Rashid, F., Ahmad, S. & Irudayaraj, J. M. K., Aug 28 2020, In : Toxics. 8, 3, 64.

Research output: Contribution to journalArticle

Open Access

Effect of PFOA on DNA Methylation and Alternative Splicing in Mouse Liver

Wen, Y., Chen, J., Li, J., Arif, W., Kalsotra, A. & Irudayaraj, J., Sep 1 2020, In : Toxicology Letters. 329, p. 38-46 9 p.

Research output: Contribution to journalArticle

Open Access

Epigenetic toxicity of PFOA and GenX in HepG2 cells and their role in lipid metabolism

Wen, Y., Mirji, N. & Irudayaraj, J., Jun 2020, In : Toxicology in Vitro. 65, 104797.

Research output: Contribution to journalArticle

Open Access

Monomeric cohesin state revealed by live-cell single-molecule spectroscopy

Liu, W., Biton, E., Pathania, A., Matityahu, A., Irudayaraj, J. & Onn, I., Feb 5 2020, In : EMBO Reports. 21, 2, e48211.

Research output: Contribution to journalArticle

Multi and transgenerational epigenetic effects of di-(2-ethylhexyl) phthalate (DEHP) in liver

Wen, Y., Rattan, S., Flaws, J. A. & Irudayaraj, J., Sep 1 2020, In : Toxicology and Applied Pharmacology. 402, 115123.

Research output: Contribution to journalArticle

Open Access

Nanoscale Drug Delivery Systems: From Medicine to Agriculture

Vega-Vásquez, P., Mosier, N. S. & Irudayaraj, J., Feb 18 2020, In : Frontiers in Bioengineering and Biotechnology. 8, 79.

Research output: Contribution to journalReview article

Open Access
Open Access
2019

Bioinspired glycosaminoglycan hydrogels via click chemistry for 3D dynamic cell encapsulation

Kuang, L., Damayanti, N. P., Jiang, C., Fei, X., Liu, W., Narayanan, N., Irudayaraj, J., Campanella, O. & Deng, M., Feb 5 2019, In : Journal of Applied Polymer Science. 136, 5, 47212.

Research output: Contribution to journalArticle

Epigenetic biomarker screening by FLIM-FRET for combination therapy in ER+ breast cancer

Liu, W., Cui, Y., Ren, W. & Irudayaraj, J., Jan 30 2019, In : Clinical epigenetics. 11, 1, 16.

Research output: Contribution to journalArticle

Epigenetic Process Monitoring in Live Cultures with Peptide Biosensors

Damayanti, N. P., Buno, K., Voytik Harbin, S. L. & Irudayaraj, J. M. K., Mar 22 2019, In : ACS Sensors. 4, 3, p. 562-565 4 p.

Research output: Contribution to journalArticle

Laser Shock Tuning Dynamic Interlayer Coupling in Graphene-Boron Nitride Moiré Superlattices

Kumar, P., Liu, J., Motlag, M., Tong, L., Hu, Y., Huang, X., Bandopadhyay, A., Pati, S. K., Ye, L., Irudayaraj, J. & Cheng, G. J., Jan 9 2019, In : Nano letters. 19, 1, p. 283-291 9 p.

Research output: Contribution to journalArticle

Magnetic Focus Lateral Flow Sensor for Detection of Cervical Cancer Biomarkers

Ren, W., Mohammed, S. I., Wereley, S. & Irudayaraj, J., Feb 19 2019, In : Analytical chemistry. 91, 4, p. 2876-2884 9 p.

Research output: Contribution to journalArticle

Modulation of gene silencing by Cdc7p via H4 K16 acetylation and phosphorylation of chromatin assembly factor CAF-1 in saccharomyces cerevisiae

Young, T. J., Cui, Y., Irudayaraj, J. & Kirchmaier, A. L., Apr 2019, In : Genetics. 211, 4, p. 1219-1237 19 p.

Research output: Contribution to journalArticle

Plasmonic enhancement in lateral flow sensors for improved sensing of E. coli O157:H7

Ren, W., Ballou, D. R., FitzGerald, R. & Irudayaraj, J., Feb 1 2019, In : Biosensors and Bioelectronics. 126, p. 324-331 8 p.

Research output: Contribution to journalArticle

Prenatal and ancestral exposure to di(2-ethylhexyl) phthalate alters gene expression and DNA methylation in mouse ovaries

Rattan, S., Beers, H. K., Kannan, A., Ramakrishnan, A., Brehm, E., Bagchi, I., Irudayaraj, J. M. K. & Flaws, J. A., Sep 15 2019, In : Toxicology and Applied Pharmacology. 379, 114629.

Research output: Contribution to journalArticle

The transition structure of chromatin fibers at the nanoscale probed by cryogenic electron tomography

Zhou, Z., Li, K., Yan, R., Yu, G., Gilpin, C. J., Jiang, W. & Irudayaraj, J. M. K., Aug 7 2019, In : Nanoscale. 11, 29, p. 13783-13789 7 p.

Research output: Contribution to journalArticle

2018

Alpha Lead Oxide (α-PbO): A New 2D Material with Visible Light Sensitivity

Kumar, P., Liu, J., Ranjan, P., Hu, Y., Yamijala, S. S. R. K. C., Pati, S. K., Irudayaraj, J. & Cheng, G. J., Mar 22 2018, In : Small. 14, 12, 1703346.

Research output: Contribution to journalArticle

An ultrasensitive aptasensor based on fluorescent resonant energy transfer and exonuclease-assisted target recycling for patulin detection

Wu, Z., Xu, E., Jin, Z. & Irudayaraj, J., May 30 2018, In : Food chemistry. 249, p. 136-142 7 p.

Research output: Contribution to journalArticle

Current technologies of electrochemical immunosensors: Perspective on signal amplification

Cho, I. H., Lee, J., Kim, J., Kang, M. S., Paik, J. K., Ku, S., Cho, H. M., Irudayaraj, J. & Kim, D. H., Jan 12 2018, In : Sensors (Switzerland). 18, 1, 207.

Research output: Contribution to journalReview article

Electrospun probiotics: An alternative for encapsulation

Akbar, Z., Zahoor, T., Huma, N., Jamil, A., Ayesha, H. & Irudayaraj, J. M. K., Nov 2018, In : Journal of Biological Regulators and Homeostatic Agents. 32, 6, p. 1551-1556 6 p.

Research output: Contribution to journalArticle

Exploring the anti-quorum sensing activity of a d-limonene nanoemulsion for Escherichia coli O157:H7

Wang, R., Vega, P., Xu, Y., Chen, C. Y. & Irudayaraj, J., Jul 2018, In : Journal of Biomedical Materials Research - Part A. 106, 7, p. 1979-1986 8 p.

Research output: Contribution to journalArticle

Impedimetric detection of bacteria by using a microfluidic chip and silver nanoparticle based signal enhancement

Wang, R., Xu, Y., Sors, T., Irudayaraj, J., Ren, W. & Wang, R., Mar 1 2018, In : Microchimica Acta. 185, 3, 184.

Research output: Contribution to journalArticle

Ultrasound beam steering of oxygen nanobubbles for enhanced bladder cancer therapy

Bhandari, P., Novikova, G., Goergen, C. J. & Irudayaraj, J., Dec 1 2018, In : Scientific reports. 8, 1, 3112.

Research output: Contribution to journalArticle

2016

A study of alterations in DNA epigenetic modifications (5mC and 5hmC) and gene expression influenced by simulated microgravity in human lymphoblastoid cells

Chowdhury, B., Seetharam, A., Wang, Z., Liu, Y., Lossie, A. C., Thimmapuram, J. & Irudayaraj, J., Jan 1 2016, In : PloS one. 11, 1, e0147514.

Research output: Contribution to journalArticle

CRISPR-dCas9 mediated TET1 targeting for selective DNA demethylation at BRCA1 promoter

Choudhury, S. R., Cui, Y., Lubecka, K., Stefanska, B. & Irudayaraj, J., 2016, In : Oncotarget. 7, 29, p. 46545-46556 12 p.

Research output: Contribution to journalArticle

Epigenetic toxicity of trichloroethylene: A single-molecule perspective

Cui, Y., Choudhury, S. R. & Irudayaraj, J., 2016, In : Toxicology Research. 5, 2, p. 641-650 10 p.

Research output: Contribution to journalArticle

Kinase phosphorylation monitoring with i-motif DNA cross-linked SERS probes

Ren, W., Damayanti, N. P., Wang, X. & Irudayaraj, J. M. K., Jan 7 2016, In : Chemical Communications. 52, 2, p. 410-413 4 p.

Research output: Contribution to journalArticle

Mitochondrial Dysfunction, Disruption of F-Actin Polymerization, and Transcriptomic Alterations in Zebrafish Larvae Exposed to Trichloroethylene

Wirbisky, S. E., Damayanti, N. P., Mahapatra, C. T., Sepúlveda, M. S., Irudayaraj, J. & Freeman, J. L., Feb 15 2016, In : Chemical Research in Toxicology. 29, 2, p. 169-179 11 p.

Research output: Contribution to journalArticle

Non-fluorescent quantification of single mRNA with transient absorption microscopy

Liu, J. & Irudayaraj, J. M. K., Dec 14 2016, In : Nanoscale. 8, 46, p. 19242-19248 7 p.

Research output: Contribution to journalArticle

Optical Clearing Delivers Ultrasensitive Hyperspectral Dark-Field Imaging for Single-Cell Evaluation

Cui, Y., Wang, X., Ren, W., Liu, J. & Irudayaraj, J., Mar 22 2016, In : ACS Nano. 10, 3, p. 3132-3143 12 p.

Research output: Contribution to journalArticle

Optogenetic regulation of site-specific subtelomeric DNA-methylation

Choudhury, S. R., Cui, Y., Narayanan, A., Gilley, D. P., Huda, N., Lo, C. L., Zhou, F. C., Yernool, D. & Irudayaraj, J., Jan 1 2016, In : Oncotarget. 7, 31, p. 50380-50391 12 p.

Research output: Contribution to journalArticle

Point-of-care test for cervical cancer in LMICs

Mohammed, S. I., Ren, W., Flowers, L., Rajwa, B., Chibwesha, C. J., Parham, G. P. & Irudayaraj, J. M. K., Jan 1 2016, In : Oncotarget. 7, 14, p. 18787-18797 11 p.

Research output: Contribution to journalArticle

Regulatory landscape and clinical implication of MBD3 in human malignant glioma

Cui, Y., Li, J., Weng, L., Wirbisky, S. E., Freeman, J. L., Liu, J., Liu, Q., Yuan, X. & Irudayaraj, J., 2016, In : Oncotarget. 7, 49, p. 81698-81714 17 p.

Research output: Contribution to journalArticle

Superplastic Formation of Metal Nanostructure Arrays with Ultrafine Gaps

Hu, Y., Xuan, Y., Wang, X., Deng, B., Saei, M., Jin, S., Irudayaraj, J. & Cheng, G. J., Jan 1 2016, In : Advanced Materials. 28, 41, p. 9152-9162 11 p.

Research output: Contribution to journalArticle

Ultrasensitive detection of microbial cells using magnetic focus enhanced lateral flow sensors

Ren, W., Cho, I. H., Zhou, Z. & Irudayaraj, J., Jan 1 2016, In : Chemical Communications. 52, 27, p. 4930-4933 4 p.

Research output: Contribution to journalArticle