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  • Mark A Anastasio
2017

A resolution-enhancing image reconstruction method for few-view differential phase-contrast tomography

Guan, H. & Anastasio, M. A., Jan 1 2017, Medical Imaging 2017: Physics of Medical Imaging. Schmidt, T. G., Lo, J. Y. & Flohr, T. G. (eds.). SPIE, 1013216. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10132).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2019

All-reflective ring illumination system for photoacoustic tomography

Alshahrani, S. S., Yan, Y., Alijabbari, N., Pattyn, A., Avrutsky, I., Malyarenko, E., Poudel, J., Anastasio, M. & Mehrmohammadi, M., Apr 1 2019, In : Journal of biomedical optics. 24, 4, 046004.

Research output: Contribution to journalArticle

Open Access
2018

A diffuse optical tomography system for whole-brain functional imaging in mice using multiple camera views

Markow, Z. E., Reisman, M. D., Bauer, A. Q., Eggebrecht, A. T., Anastasio, M. A. & Culver, J. P., Jan 1 2018, Optical Tomography and Spectroscopy, OTS 2018. OSA - The Optical Society, (Optics InfoBase Conference Papers; vol. Part F90-OTS 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2016

X-ray Phase Contrast Allows Three Dimensional, Quantitative Imaging of Hydrogel Implants

Appel, A. A., Larson, J. C., Jiang, B., Zhong, Z., Anastasio, M. A. & Brey, E. M., Mar 1 2016, In : Annals of Biomedical Engineering. 44, 3, p. 773-781 9 p.

Research output: Contribution to journalArticle

2020

Improved breast cancer diagnosis using ultrasound guided diffuse optical tomography

Shihab Uddin, K. M., Zhang, M., Brooks, F., Anastasio, M. & Zhu, Q., 2020, Clinical and Translational Biophotonics, Translational 2020. OSA - The Optical Society, (Optics InfoBase Conference Papers; vol. Part F178-Translational-2020).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2011

Task-based assessment of phase-contrast mammography

Zysk, A. M. & Anastasio, M. A., Dec 1 2011, Frontiers in Optics, FiO 2011. (Optics InfoBase Conference Papers).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2020

Learning numerical observers using unsupervised domain adaptation

He, S., Zhou, W., Li, H. & Anastasio, M. A., Jan 1 2020, Medical Imaging 2020: Image Perception, Observer Performance, and Technology Assessment. Samuelson, F. W. & Taylor-Phillips, S. (eds.). SPIE, 113160W. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11316).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2019

Approximating the Ideal Observer and Hotelling Observer for Binary Signal Detection Tasks by Use of Supervised Learning Methods

Zhou, W., Li, H. & Anastasio, M. A., Oct 2019, In : IEEE transactions on medical imaging. 38, 10, p. 2456-2468 13 p., 8691467.

Research output: Contribution to journalArticle

2020

Learning efficient channels with a dual loss autoencoder

Granstedt, J. L., Zhou, W. & Anastasio, M. A., Jan 1 2020, Medical Imaging 2020: Image Perception, Observer Performance, and Technology Assessment. Samuelson, F. W. & Taylor-Phillips, S. (eds.). SPIE, 113160C. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 11316).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2017

Regularized Dual Averaging Image Reconstruction for Full-Wave Ultrasound Computed Tomography

Matthews, T. P., Wang, K., Li, C., Duric, N. & Anastasio, M. A., May 2017, In : IEEE Transactions on Ultrasonics, Ferroelectrics, and Frequency Control. 64, 5, p. 811-825 15 p., 7878669.

Research output: Contribution to journalArticle

Open Access
2020

Photoacoustic Imaging in Tissue Engineering and Regenerative Medicine

Shrestha, B., Deluna, F., Anastasio, M. A., Yong Ye, J. & Brey, E. M., Feb 2020, In : Tissue Engineering - Part B: Reviews. 26, 1, p. 79-102 24 p.

Research output: Contribution to journalReview article

Open Access
2011

Limited data image reconstruction in optoacoustic tomography by constrained, total variation minimization

Wang, K., Sidky, E. Y., Anastasio, M. A., Oraevsky, A. A. & Pan, X., May 5 2011, Photons Plus Ultrasound: Imaging and Sensing 2011. 78993U. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7899).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2014

A multi-channel image reconstruction method for grating-based X-ray phase-contrast computed Tomography

Xu, Q., Sawatzky, A. & Anastasio, M. A., Jan 1 2014, Medical Imaging 2014: Physics of Medical Imaging. SPIE, 90330D. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 9033).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2016

Quantification of signal detection performance degradation induced by phase-retrieval in propagation-based x-ray phase-contrast imaging

Chou, C. Y. & Anastasio, M. A., Jan 1 2016, Medical Imaging 2016: Physics of Medical Imaging. Kontos, D., Lo, J. Y. & Flohr, T. G. (eds.). SPIE, 97835J. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 9783).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2019
2013

An initial evaluation of analyser-based phase-contrast X-ray imaging of carotid plaque microstructure

Appel, A. A., Chou, C. Y., Larson, J. C., Zhong, Z., Schoen, F. J., Johnston, C. M., Brey, E. M. & Anastasio, M. A., Jan 1 2013, In : British Journal of Radiology. 86, 1021, 20120318.

Research output: Contribution to journalArticle

2015

Automated contouring error detection based on supervised geometric attribute distribution models for radiation therapy: A general strategy

Chen, H. C., Tan, J., Dolly, S., Kavanaugh, J., Anastasio, M. A., Low, D. A., Harold Li, H., Altman, M., Gay, H., Thorstad, W. L., Mutic, S. & Li, H., Feb 1 2015, In : Medical Physics. 42, 2, p. 1048-1059 12 p.

Research output: Contribution to journalArticle

2014

Investigation of the adjoint-state method for ultrasound computed tomography: A numerical and experimental study

Anis, F., Lou, Y., Conjusteau, A., Su, R., Oruganti, T., Ermilov, S. A., Oraevsky, A. A. & Anastasio, M. A., Jan 1 2014, Photons Plus Ultrasound: Imaging and Sensing 2014. SPIE, 894337. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 8943).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2018

Full-view 3D imaging system for functional and anatomical screening of the breast

Oraevsky, A., Su, R., Nguyen, H., Moore, J., Lou, Y., Bhadra, S., Forte, L., Anastasio, M. & Yang, W., Jan 1 2018, Photons Plus Ultrasound: Imaging and Sensing 2018. Wang, L. V. & Oraevsky, A. A. (eds.). SPIE, 104942Y. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10494).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2017

Design and development of a full-ring ultrasound and photoacoustic tomography system for breast cancer imaging

Alshahrani, S., Yan, Y., Avrutsky, I., Anastasio, M., Malyarenko, E., Duric, N. & Mehrmohammadi, M., Oct 31 2017, 2017 IEEE International Ultrasonics Symposium, IUS 2017. IEEE Computer Society, 8092129. (IEEE International Ultrasonics Symposium, IUS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2019

Automatic microscopic cell counting by use of unsupervised adversarial domain adaptation and supervised density regression

He, S., Minn, K. T., Solnica-krezel, L., Li, H. & Anastasio, M., Mar 18 2019, p. 2.

Research output: Contribution to conferencePaper

2015

Effect of rotating partial illumination on image reconstruction for optoacoustic breast tomography

Lou, Y., Nadvoretskiy, V., Wang, K., Ermilov, S., Oraevsky, A. & Anastasio, M. A., Jan 1 2015, Photons Plus Ultrasound: Imaging and Sensing 2015. Oraevsky, A. A. & Wang, L. V. (eds.). SPIE, 93233L. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 9323).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2011

Feasibility study of complex wavefield retrieval in off-axis acoustic holography employing an acousto-optic sensor

Rodríguez, G. L., Weber, J., Sandhu, J. S. & Anastasio, M. A., Dec 1 2011, In : Ultrasonics. 51, 8, p. 847-852 6 p.

Research output: Contribution to journalArticle

2020

X-ray CT in Phase Contrast Enhancement Geometry of Alginate Microbeads in a Whole-Animal Model

Brown, J., Somo, S., Brooks, F., Komarov, S., Zhou, W., Anastasio, M. & Brey, E., Mar 1 2020, In : Annals of Biomedical Engineering. 48, 3, p. 1016-1024 9 p.

Research output: Contribution to journalArticle

2013

3D laser optoacoustic ultrasonic imaging system for preclinical research

Ermilov, S. A., Conjusteau, A., Hernandez, T., Su, R., Nadvoretskiy, V., Tsyboulski, D., Anis, F., Anastasio, M. A. & Oraevsky, A. A., May 28 2013, Photons Plus Ultrasound: Imaging and Sensing 2013. 85810N. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 8581).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2017
2014

Simultaneous reconstruction of absorbed optical energy density and speed of sound distributions in photoacoustic computed tomography

Huang, C., Wang, K., Schoonover, R. W., Wang, L. V. & Anastasio, M. A., Jan 1 2014, Photons Plus Ultrasound: Imaging and Sensing 2014. SPIE, 894360. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 8943).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2019

Autoencoder embedding of task-specific information

Granstedt, J., Zhou, W. & Anastasio, M. A., Mar 4 2019, p. 6.

Research output: Contribution to conferencePaper

2013

Statistical reconstruction of material decomposed data in spectral CT

Schirra, C. O., Roessl, E., Koehler, T., Brendel, B., Thran, A., Pan, D., Anastasio, M. A. & Proksa, R., Jul 22 2013, In : IEEE Transactions on Medical Imaging. 32, 7, p. 1249-1257 9 p., 6473891.

Research output: Contribution to journalArticle

2011

A layered media approach to photoacoustic tomography

Schoonover, R. W. & Anastasio, M. A., May 5 2011, Photons Plus Ultrasound: Imaging and Sensing 2011. 78993P. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 7899).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2015

Image reconstruction in transcranial photoacoustic computed tomography of the brain

Mitsuhashi, K., Wang, L. V. & Anastasio, M. A., Jan 1 2015, Photons Plus Ultrasound: Imaging and Sensing 2015. Oraevsky, A. A. & Wang, L. V. (eds.). SPIE, 93233B. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 9323).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Photoacoustic computed tomography without accurate ultrasonic transducer responses

Sheng, Q., Wang, K., Xia, J., Zhu, L., Wang, L. V. & Anastasio, M. A., Jan 1 2015, Photons Plus Ultrasound: Imaging and Sensing 2015. Oraevsky, A. A. & Wang, L. V. (eds.). SPIE, 932313. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 9323).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2019

Joint-reconstruction-enabled partial-dithering strategy for edge-illumination x-ray phase-contrast tomography

Chen, Y. & Anastasio, M. A., Mar 1 2019, p. 60.

Research output: Contribution to conferencePaper

2012

SU‐F‐BRCD‐09: Total Variation (TV) Based Fast Convergent Iterative CBCT Reconstruction with GPU Acceleration

xu, Q., Yang, D., Tan, J. & Anastasio, M., Jun 2012, In : Medical Physics. 39, 6, 1 p.

Research output: Contribution to journalArticle

2013

Enhancement of photoacoustic tomography by ultrasonic computed tomography based on optical excitation of elements of a full-ring transducer array

Xia, J., Huang, C., Maslov, K., Anastasio, M. A. & Wang, L. V., Aug 23 2013, In : Optics Letters. 38, 16, p. 3140-3143 4 p.

Research output: Contribution to journalArticle

2018

Heart motion tracking on cine MRI based on a deep Boltzmann machine-driven level set method

Wu, J., Ruan, S., Mazur, T. R., Daniel, N., Lashmett, H., Ochoa, L., Zoberi, I., Lian, C., Gach, H. M., Mutic, S., Thomas, M., Anastasio, M. A. & Li, H., May 23 2018, 2018 IEEE 15th International Symposium on Biomedical Imaging, ISBI 2018. IEEE Computer Society, p. 1153-1156 4 p. (Proceedings - International Symposium on Biomedical Imaging; vol. 2018-April).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2013

Full-wave iterative image reconstruction in photoacoustic tomography with acoustically inhomogeneous media

Huang, C., Wang, K., Nie, L., Wang, L. V. & Anastasio, M. A., Jun 10 2013, In : IEEE Transactions on Medical Imaging. 32, 6, p. 1097-1110 14 p., 6484982.

Research output: Contribution to journalArticle

2017

Recent advances in edge illumination x-ray phase-contrast tomography

Zamir, A., Hagen, C., Diemoz, P. C., Endrizzi, M., Vittoria, F., Chen, Y., Anastasio, M. A. & Olivo, A., Oct 1 2017, In : Journal of Medical Imaging. 4, 4, 040901.

Research output: Contribution to journalReview article

Open Access
2015

Boundary-enhancement in propagation-based x-ray phase-contrast tomosynthesis improves depth position characterization

Guan, H., Xu, Q., Garson, A. B. & Anastasio, M. A., Apr 21 2015, In : Physics in medicine and biology. 60, 8, p. N151-N165 N151.

Research output: Contribution to journalArticle

2018

Improved two step reconstruction method in Ultrasound guided Diffuse Optical Tomography

Shihab Uddin, K. M., Mostofa, A., Anastasio, M. & Zhu, Q., Jan 1 2018, Optical Tomography and Spectroscopy, OTS 2018. OSA - The Optical Society, (Optics InfoBase Conference Papers; vol. Part F90-OTS 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2014

Discrete imaging models for three-dimensional optoacoustic tomography using radially symmetric expansion functions

Wang, K., Schoonover, R. W., Su, R., Oraevsky, A. & Anastasio, M. A., May 2014, In : IEEE Transactions on Medical Imaging. 33, 5, p. 1180-1193 14 p., 6749001.

Research output: Contribution to journalArticle

2020

A partial-dithering strategy for edge-illumination X-ray phase-contrast tomography enabled by a joint reconstruction method

Chen, Y., Hagen, C. K., Olivo, A. & Anastasio, M. A., May 21 2020, In : Physics in medicine and biology. 65, 10, 105007.

Research output: Contribution to journalArticle

2019

Learning the Hotelling observer for SKE detection tasks by use of supervised learning methods

Zhou, W., Li, H. & Anastasio, M. A., Mar 4 2019, p. 7.

Research output: Contribution to conferencePaper

2013

Iterative image reconstruction in photoacoustic tomography using Kaiser-Bessel windows

Schoonover, R. W., Wang, K. & Anastasio, M. A., May 28 2013, Photons Plus Ultrasound: Imaging and Sensing 2013. 85814X. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 8581).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2019

Automatic microscopic cell counting by use of deeply-supervised density regression model

He, S., Minn, K. T., Solnica-krezel, L., Anastasio, M. & Li, H., Mar 18 2019, p. 19.

Research output: Contribution to conferencePaper

2017

Task-based image quality assessment in radiation therapy: Initial characterization and demonstration with CT simulation images

Dolly, S. R., Anastasio, M. A., Yu, L. & Li, H., Jan 1 2017, Medical Imaging 2017: Image Perception, Observer Performance, and Technology Assessment. Nishikawa, R. M. & Kupinski, M. A. (eds.). SPIE, 101360Y. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10136).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2018

Convolutional neural network based automatic plaque characterization for intracoronary optical coherence tomography images

He, S., Zheng, J., Maehara, A., Mintz, G., Tang, D., Anastasio, M. & Li, H., Jan 1 2018, Medical Imaging 2018: Image Processing. Angelini, E. D., Angelini, E. D. & Landman, B. A. (eds.). SPIE, 1057432. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 10574).

Research output: Chapter in Book/Report/Conference proceedingConference contribution