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2D-SEIRA spectroscopy to highlight conformational changes of the cytochrome c oxidase induced by direct electron transfer

Nowak, C., Laredo, T., Gebert, J., Lipkowski, J., Gennis, R. B., Ferguson-Miller, S., Knoll, W. & Naumann, R. L. C., Jun 1 2011, In : Metallomics. 3, 6, p. 619-627 9 p.

Research output: Contribution to journalArticle

Electron Transport Complex IV
Spectrum Analysis
Spectroscopy
Electrons
Biomimetics

Active site rearrangement and structural divergence in prokaryotic respiratory oxidases

Safarian, S., Hahn, A., Mills, D. J., Radloff, M., Eisinger, M. L., Nikolaev, A., Meier-Credo, J., Melin, F., Miyoshi, H., Gennis, R. B., Sakamoto, J., Langer, J. D., Hellwig, P., Kühlbrandt, W. & Michel, H., Oct 4 2019, In : Science. 366, 6461, p. 100-104 5 p.

Research output: Contribution to journalArticle

Catalytic Domain
Oxidoreductases
Oxygen
Electron Transport Complex IV
Cytochromes

Adaptation of aerobic respiration to low O2 environments

Han, H., Hemp, J., Pace, L. A., Ouyang, H., Ganesan, K., Roh, J. H., Daldal, F., Blanke, S. R. & Gennis, R. B., Aug 23 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 34, p. 14109-14114 6 p.

Research output: Contribution to journalArticle

Protons
Respiration
Oxygen
Oxidoreductases
Proton Pumps

Aerobic respiratory chain of Escherichia coli is not allowed to work in fully uncoupled mode

Borisov, V. B., Murali, R., Verkhovskaya, M. L., Bloch, D. A., Han, H., Gennis, R. B. & Verkhovsky, M. I., Oct 18 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 42, p. 17320-17324 5 p.

Research output: Contribution to journalArticle

Cytochromes
Electron Transport
Proton-Motive Force
Escherichia coli
Electron Transport Complex I
Thermus thermophilus
Lipid bilayers
Lipid Bilayers
Catalytic Domain
Tunnels

Alternate pathways for NADH oxidation in Thermus thermophilus using type 2 NADH dehydrogenases

Venkatakrishnan, P., Lencina, A. M., Schurig-Briccio, L. A. & Gennis, R. B., May 1 2013, In : Biological Chemistry. 394, 5, p. 667-676 10 p.

Research output: Contribution to journalArticle

Thermus thermophilus
NADH Dehydrogenase
NAD
Genes
Oxidation

Antiinfectives targeting enzymes and the proton motive force

Feng, X., Zhu, W., Schurig-Briccio, L. A., Lindert, S., Shoen, C., Hitchings, R., Li, J., Wang, Y., Baig, N., Zhou, T., Kim, B. K., Crick, D. C., Cynamon, M., McCammon, J. A., Gennis, R. B. & Oldfield, E., Dec 22 2015, In : Proceedings of the National Academy of Sciences of the United States of America. 112, 51, p. E7073-E7082

Research output: Contribution to journalArticle

Proton-Motive Force
Mycobacterium tuberculosis
undecaprenyl pyrophosphate synthetase
Membranes
Staphylococcus aureus

A pathogenic mutation in cytochrome c oxidase results in impaired proton pumping while retaining O2-reduction activity

Namslauer, I., Lee, H. J., Gennis, R. B. & Brzezinski, P., May 1 2010, In : Biochimica et Biophysica Acta - Bioenergetics. 1797, 5, p. 550-556 7 p.

Research output: Contribution to journalArticle

Electron Transport Complex IV
Proton transfer
Protons
Mutation
Substitution reactions

A positive feedback-based gene circuit to increase the production of a membrane protein

Bansal, K., Yang, K., Nistala, G. J., Gennis, R. B. & Bhalerao, K. D., May 25 2010, In : Journal of Biological Engineering. 4, 6.

Research output: Contribution to journalArticle

Gene Regulatory Networks
Membrane Proteins
Genes
Proteins
Membranes

A Purple Cupredoxin from Nitrosopumilus maritimus Containing a Mononuclear Type 1 Copper Center with an Open Binding Site

Hosseinzadeh, P., Tian, S., Marshall, N. M., Hemp, J., Mullen, T., Nilges, M. J., Gao, Y. G., Robinson, H., Stahl, D. A., Gennis, R. B. & Lu, Y., May 25 2016, In : Journal of the American Chemical Society. 138, 20, p. 6324-6327 4 p.

Research output: Contribution to journalArticle

Binding sites
Copper
Binding Sites
electron spin resonance
copper

A third subunit in ancestral cytochrome c-dependent nitric oxide reductases

Bricio, C., Alvarez, L., San Martin, M., Schurig-Briccio, L. A., Gennis, R. B. & Berenguer, J., Aug 2014, In : Applied and environmental microbiology. 80, 16, p. 4871-4878 8 p.

Research output: Contribution to journalArticle

cytochrome c
nitric oxide
Cytochromes c
cytochrome
Thermus thermophilus
Oxidoreductases
Nitric Oxide
Substrates
Catalytic Domain
Tunnels
Rhodobacter sphaeroides
Electron Transport Complex IV
Heme
Electrons
Protons

Catalase activity of cytochrome c oxidase assayed with hydrogen peroxide-sensitive electrode microsensor

Bolshakov, I. A., Vygodina, T. V., Gennis, R. B., Karyakin, A. A. & Konstantinov, A. A., Nov 1 2010, In : Biochemistry (Moscow). 75, 11, p. 1352-1360 9 p.

Research output: Contribution to journalArticle

Microsensors
Electron Transport Complex IV
Catalase
Hydrogen Peroxide
Electrodes

Cell-free synthesis of cytochrome bo 3 ubiquinol oxidase in artificial membranes

Yildiz, A. A., Knoll, W., Gennis, R. B. & Sinner, E. K., Apr 1 2012, In : Analytical Biochemistry. 423, 1, p. 39-45 7 p.

Research output: Contribution to journalArticle

Artificial Membranes
Cytochromes
Membranes
Membrane Proteins
Proteins

Characterization and X-ray structure of the NADH-dependent coenzyme A disulfide reductase from Thermus thermophilus

Lencina, A. M., Koepke, J., Preu, J., Muenke, C., Gennis, R. B., Michel, H. & Schurig-Briccio, L. A., Nov 1 2019, In : Biochimica et Biophysica Acta - Bioenergetics. 1860, 11, 148080.

Research output: Contribution to journalArticle

Thermus thermophilus
Vitamin K 3
NAD
Oxidoreductases
X-Rays

Characterization of the nitric oxide reductase from Thermus thermophilus

Schurig-Briccio, L. A., Venkatakrishnan, P., Hemp, J., Bricio, C., Berenguer, J. & Gennis, R. B., Jul 30 2013, In : Proceedings of the National Academy of Sciences of the United States of America. 110, 31, p. 12613-12618 6 p.

Research output: Contribution to journalArticle

Thermus thermophilus
Heme
Catalytic Domain
Oxidoreductases
Enzymes

Characterization of the PIB-Type ATPases present in Thermus thermophilus

Schurig-Briccio, L. A. & Gennis, R. B., Aug 1 2012, In : Journal of bacteriology. 194, 15, p. 4107-4113 7 p.

Research output: Contribution to journalArticle

Thermus thermophilus
Adenosine Triphosphatases
Copper
Genes
Cadmium

Characterization of the semiquinone radical stabilized by the cytochrome aa3-600 menaquinol oxidase of Bacillus subtilis

Yi, S. M., Narasimhulu, K. V., Samoilova, R. I., Gennis, R. B. & Dikanov, S. A., Jun 11 2010, In : Journal of Biological Chemistry. 285, 24, p. 18241-18251 11 p.

Research output: Contribution to journalArticle

Electron Transport Complex IV
Bacilli
Cytochromes
Bacillus subtilis
Ubiquinone

Characterization of the type 2 NADH:menaquinone oxidoreductases from Staphylococcus aureus and the bactericidal action of phenothiazines

Schurig-Briccio, L. A., Yano, T., Rubin, H. & Gennis, R. B., Jul 2014, In : Biochimica et Biophysica Acta - Bioenergetics. 1837, 7, p. 954-963 10 p.

Research output: Contribution to journalArticle

Phenothiazines
Vitamin K 2
NAD
Staphylococcus aureus
Oxidoreductases

Characterization of the Type III sulfide:quinone oxidoreductase from Caldivirga maquilingensis and its membrane binding

Lencina, A. M., Ding, Z., Schurig-Briccio, L. A. & Gennis, R. B., Mar 1 2013, In : Biochimica et Biophysica Acta - Bioenergetics. 1827, 3, p. 266-275 10 p.

Research output: Contribution to journalArticle

sulfide quinone reductase
Membranes
Sulfides
Enzymes
Electrons

Conformational coupling between the active site and residues within the KC-channel of the Vibrio cholerae cbb3-type (C-family) oxygen reductase

Ahn, Y. O., Mahinthichaichan, P., Lee, H. J., Ouyang, H., Kaluka, D., Yeh, S. R., Arjona, D., Rousseau, D. L., Tajkhorshid, E., Ädelroth, P. & Gennis, R. B., Oct 21 2014, In : Proceedings of the National Academy of Sciences of the United States of America. 111, 42, p. E4419-E4428

Research output: Contribution to journalArticle

Vibrio cholerae
Catalytic Domain
Oxidoreductases
Oxygen
Protons

Conformational transitions and molecular hysteresis of cytochrome c oxidase: Varying the redox state by electronic wiring

Nowak, C., Santonicola, M. G., Schach, D., Zhu, J., Gennis, R. B., Ferguson-Miller, S., Baurecht, D., Walz, D., Knoll, W. & Naumann, R. L. C., Nov 7 2010, In : Soft Matter. 6, 21, p. 5523-5532 10 p.

Research output: Contribution to journalArticle

wiring
oxidase
cytochromes
Electron Transport Complex IV
Electric wiring
Bacteriorhodopsins
Deprotonation
Proton transfer
Protons
Water

CtaM is required for menaquinol oxidase aa 3 function in Staphylococcus aureus

Hammer, N. D., Schurig-Briccio, L. A., Gerdes, S. Y., Gennis, R. B. & Skaar, E. P., Jul 1 2016, In : mBio. 7, 4, e00823-16.

Research output: Contribution to journalArticle

Staphylococcus aureus
Oxidoreductases
Electron Transport
Heme
Oxygen

Cytochromes bd-I and bo3 are essential for the bactericidal effect of microcin J25 on Escherichia coli cells

Galván, A. E., Chalón, M. C., Schurig-Briccio, L. A., Salomón, R. A., Minahk, C. J., Gennis, R. B. & Bellomio, A., Feb 2018, In : Biochimica et Biophysica Acta - Bioenergetics. 1859, 2, p. 110-118 9 p.

Research output: Contribution to journalArticle

Open Access
Cytochromes
Escherichia coli
Cell Respiration
Oxygen
Membranes
Rhodobacter sphaeroides
Electron Transport Complex IV
Protons
Hydrogen
Mutation

Differential effects of glutamate-286 mutations in the aa3-type cytochrome c oxidase from Rhodobacter sphaeroides and the cytochrome bo 3 ubiquinol oxidase from Escherichia coli

Egawa, T., Ganesan, K., Lin, M. T., Yu, M. A., Hosler, J. P., Yeh, S. R., Rousseau, D. L. & Gennis, R. B., Oct 1 2011, In : Biochimica et Biophysica Acta - Bioenergetics. 1807, 10, p. 1342-1348 7 p.

Research output: Contribution to journalArticle

Rhodobacter sphaeroides
Electron Transport Complex IV
Cytochromes
Escherichia coli
Protons

Direct electrochemistry of cytochrome bo3 oxidase at a series of gold nanoparticles-modified electrodes

Melin, F., Meyer, T., Lankiang, S., Choi, S. K., Gennis, R. B., Blanck, C., Schmutz, M. & Hellwig, P., Jan 1 2013, In : Electrochemistry Communications. 26, 1, p. 105-108 4 p.

Research output: Contribution to journalArticle

Electrochemistry
Gold
Nanoparticles
Proteins
Immobilized Enzymes

Dissection of hydrogen bond interaction network around an iron-sulfur cluster by site-specific isotope labeling of hyperthermophilic archaeal rieske-type ferredoxin

Iwasaki, T., Fukazawa, R., Miyajima-Nakano, Y., Baldansuren, A., Matsushita, S., Lin, M. T., Gennis, R. B., Hasegawa, K., Kumasaka, T. & Dikanov, S., Dec 5 2012, In : Journal of the American Chemical Society. 134, 48, p. 19731-19738 8 p.

Research output: Contribution to journalArticle

Isotope Labeling
Ferredoxins
Dissection
dissection
Sulfur

Division of labor in transhydrogenase by alternating proton translocation and hydride transfer

Leung, J. H., Schurig-Briccio, L. A., Yamaguchi, M., Moeller, A., Speir, J. A., Gennis, R. B. & Stout, C. D., Jan 9 2015, In : Science. 347, 6218, p. 178-181 4 p.

Research output: Contribution to journalArticle

NADP
Protons
NADP Transhydrogenases
Thermus thermophilus
Proton-Motive Force

Dynamics of the KB Proton Pathway in Cytochrome ba3 from Thermus thermophilus

von Ballmoos, C., Smirnova, I., Poiana, F., Gonska, N., Chang, H. Y., Gennis, R. B., Brzezinski, P. & Ädelroth, P., May 1 2017, In : Israel Journal of Chemistry. 57, 5, p. 424-436 13 p.

Research output: Contribution to journalArticle

Protons
Oxidoreductases
Proton transfer
Pumps
Proton Pumps

Entrance of the proton pathway in cbb 3-type heme-copper oxidases

Lee, H. J., Gennis, R. B. & Ädelroth, P., Oct 25 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 43, p. 17661-17666 6 p.

Research output: Contribution to journalArticle

Heme
Protons
Rhodobacter sphaeroides
Proton-Motive Force
Membranes

Evidence for distinct electron transfer processes in terminal oxidases from different origin by means of protein film voltammetry

Meyer, T., Melin, F., Xie, H., Von Der Hocht, I., Choi, S. K., Noor, M. R., Michel, H., Gennis, R. B., Soulimane, T. & Hellwig, P., Aug 6 2014, In : Journal of the American Chemical Society. 136, 31, p. 10854-10857 4 p.

Research output: Contribution to journalArticle

Voltammetry
Oxidoreductases
Enzymes
Electrons
enzyme

Exploring by pulsed EPR the electronic structure of ubisemiquinone bound at the QH site of cytochrome bo3 from Escherichia coli with in vivo 13C-labeled methyl and methoxy substituents

Lin, M. T., Shubin, A. A., Samoilova, R. I., Narasimhulu, K. V., Baldansuren, A., Gennis, R. B. & Dikanov, S. A., Mar 25 2011, In : Journal of Biological Chemistry. 286, 12, p. 10105-10114 10 p.

Research output: Contribution to journalArticle

coenzyme Q10
Cytochromes
Escherichia coli
Electronic structure
Paramagnetic resonance

Exploring the proton pump and exit pathway for pumped protons in cytochrome ba 3 from Thermus thermophilus

Chang, H. Y., Choi, S. K., Vakkasoglu, A. S., Chen, Y., Hemp, J., Fee, J. A. & Gennis, R. B., Apr 3 2012, In : Proceedings of the National Academy of Sciences of the United States of America. 109, 14, p. 5259-5264 6 p.

Research output: Contribution to journalArticle

Thermus thermophilus
Proton Pumps
Propionates
Protons
Hydrogen

Functional importance of a pair of conserved glutamic acid residues and of Ca2+ binding in the cbb 3-type oxygen reductases from rhodobacter sphaeroides and vibrio cholerae

Ouyang, H., Han, H., Roh, J. H., Hemp, J., Hosler, J. P. & Gennis, R. B., Sep 18 2012, In : Biochemistry. 51, 37, p. 7290-7296 7 p.

Research output: Contribution to journalArticle

Rhodobacter sphaeroides
Vibrio cholerae
Heme
Glutamic Acid
Glutamates
Cytochromes
Escherichia coli
Protons
Glutamic Acid
Electrons

Functional interactions between membrane-bound transporters and membranes

Öjemyr, L. N., Lee, H. J., Gennis, R. B. & Brzezinski, P., Sep 7 2010, In : Proceedings of the National Academy of Sciences of the United States of America. 107, 36, p. 15763-15767 5 p.

Research output: Contribution to journalArticle

Membrane Transport Proteins
Membranes
Protons
Membrane Proteins
Respiratory Transport

Functional role of Thr-312 and Thr-315 in the proton-transfer pathway in ba 3 cytochrome c oxidase from thermus thermophilus

Smirnova, I., Reimann, J., Von Ballmoos, C., Chang, H. Y., Gennis, R. B., Fee, J. A., Brzezinski, P. & Ädelroth, P., Aug 24 2010, In : Biochemistry. 49, 33, p. 7033-7039 7 p.

Research output: Contribution to journalArticle

Thermus thermophilus
Proton transfer
Electron Transport Complex IV
Protons
Oxidoreductases

Heme-heme and heme-ligand interactions in the di-heme oxygen-reducing site of cytochrome bd from Escherichia coli revealed by nanosecond absorption spectroscopy

Rappaport, F., Zhang, J., Vos, M. H., Gennis, R. B. & Borisov, V. B., Sep 1 2010, In : Biochimica et Biophysica Acta - Bioenergetics. 1797, 9, p. 1657-1664 8 p.

Research output: Contribution to journalArticle

Carbon Monoxide
Cytochromes
Heme
Absorption spectroscopy
Escherichia coli

High-resolution membrane protein structure by joint calculations with solid-state NMR and X-ray experimental data

Tang, M., Sperling, L. J., Berthold, D. A., Schwieters, C. D., Nesbitt, A. E., Nieuwkoop, A. J., Gennis, R. B. & Rienstra, C. M., Nov 1 2011, In : Journal of Biomolecular NMR. 51, 3, p. 227-233 7 p.

Research output: Contribution to journalArticle

Nuclear magnetic resonance spectroscopy
Membrane Proteins
Magnetic Resonance Spectroscopy
Joints
X-Rays

Interactions of intermediate semiquinone with surrounding protein residues at the QH site of wild-type and D75H mutant cytochrome bo 3 from Escherichia coli

Lin, M. T., Baldansuren, A., Hart, R., Samoilova, R. I., Narasimhulu, K. V., Yap, L. L., Choi, S. K., O'Malley, P. J., Gennis, R. B. & Dikanov, S. A., May 8 2012, In : Biochemistry. 51, 18, p. 3827-3838 12 p.

Research output: Contribution to journalArticle

Cytochromes
Labeling
Escherichia coli
Nitrogen
Proteins

Intricate role of water in proton transport through cytochrome c oxidase

Lee, H. J., Svahn, E., Swanson, J. M. J., Lepp, H., Voth, G. A., Brzezinski, P. & Gennis, R. B., Nov 17 2010, In : Journal of the American Chemical Society. 132, 45, p. 16225-16239 15 p.

Research output: Contribution to journalArticle

Electron Transport Complex IV
cytochrome
Protons
mutation
Water

Ionophoric effects of the antitubercular drug bedaquiline

Hards, K., McMillan, D. G. G., Schurig-Briccio, L. A., Gennis, R. B., Lill, H., Bald, D. & Cook, G. M., Jul 10 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 28, p. 7326-7331 6 p.

Research output: Contribution to journalArticle

bedaquiline
Antitubercular Agents
Adenosine Triphosphate
Escherichia coli
Proton-Motive Force

Kinetic design of the respiratory oxidases

Von Ballmoos, C., Gennis, R. B., Ädelroth, P. & Brzezinski, P., Jul 5 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 27, p. 11057-11062 6 p.

Research output: Contribution to journalArticle

Protons
Oxidoreductases
Electrons
Catalytic Domain
Thermus thermophilus

Kinetics and intermediates of the reaction of fully reduced escherichia coli bo 3 ubiquinol oxidase with O2

Szundi, I., Kittredge, C., Choi, S. K., McDonald, W., Ray, J., Gennis, R. B. & Einarsdóttir, Ó., Jan 1 2014, In : Biochemistry. 53, 33, p. 5393-5404 12 p.

Research output: Contribution to journalArticle

Escherichia coli
Heme
Kinetics
Cytochromes
Oxidation

Location of the Substrate Binding Site of the Cytochrome bo3 Ubiquinol Oxidase from Escherichia coli

Choi, S. K., Schurig-Briccio, L., Ding, Z., Hong, S., Sun, C. & Gennis, R. B., Jun 21 2017, In : Journal of the American Chemical Society. 139, 24, p. 8346-8354 9 p.

Research output: Contribution to journalArticle

Binding sites
Cytochromes
Escherichia coli
cytochrome
coenzyme Q10

Mechanism of proton transfer through the KC proton pathway in the Vibrio cholerae cbb3 terminal oxidase

Ahn, Y. O., Albertsson, I., Gennis, R. B. & Ädelroth, P., Nov 2018, In : Biochimica et Biophysica Acta - Bioenergetics. 1859, 11, p. 1191-1198 8 p.

Research output: Contribution to journalArticle

Proton transfer
Vibrio cholerae
Protons
Oxidoreductases
Oxygen

Microcin J25 inhibits ubiquinol oxidase activity of purified cytochrome bd-I from Escherichia coli

Galván, A. E., Chalón, M. C., Ríos Colombo, N. S., Schurig-Briccio, L. A., Sosa-Padilla, B., Gennis, R. B. & Bellomio, A., May 2019, In : Biochimie. 160, p. 141-147 7 p.

Research output: Contribution to journalArticle

Cytochromes
Escherichia coli
Peptides
Cyanides
Electron Transport