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• Short survey

  Microcantilevers track single-cell mass

  Bashir, R., Nov 8 2016, In: Nature Biotechnology. 34, 11, p. 1125-11260 10136 p.

  Research output: Contribution to journal › Short survey › peer-review
• Review article

  3D printing for preoperative planning and surgical training: a review

  Ganguli, A., Pagan-Diaz, G. J., Grant, L., Cvetkovic, C., Bramlet, M., Vozenilek, J., Kesavadas, T. & Bashir, R., Sep 1 2018, In: Biomedical microdevices. 20, 3, 65.

  Research output: Contribution to journal › Review article › peer-review

  • Three-Dimensional Printing
  • Printing
  • Audiovisual Aids
  • Planning
  • Diagnostic Imaging

• Droplet-based biosensing for lab-on-a-chip, open microfluidics platforms

  Dak, P., Ebrahimi, A., Swaminathan, V., Duarte-Guevara, C., Bashir, R. & Alam, M. A., 2016, In: Biosensors. 6, 2, 14.

  Research output: Contribution to journal › Review article › peer-review

  • Lab-on-a-chip
  • Microfluidics
  • Biosensing Techniques
  • Biosensors
  • Costs and Cost Analysis

• Electrical Chips for Biological Point-of-Care Detection

  Reddy, B., Salm, E. & Bashir, R., Jul 11 2016, In: Annual Review of Biomedical Engineering. 18, p. 329-355 27 p.

  Research output: Contribution to journal › Review article › peer-review

  • Biochips
  • Point-of-Care Systems
  • Lab-on-a-chip
  • Multiplexing
  • Health care

• Micro- and nanotechnology for HIV/AIDS diagnostics in resource-limited settings

  Damhorst, G. L., Watkins, N. N. & Bashir, R., 2013, In: IEEE Transactions on Biomedical Engineering. 60, 3, p. 715-726 12 p.

  Research output: Contribution to journal › Review article › peer-review

  • Viruses
  • Nanotechnology
  • T-cells
  • Immune system
  • Blood

• Multi-cellular engineered living systems: Building a community around responsible research on emergence

  Sample, M., Boulicault, M., Allen, C., Bashir, R., Hyun, I., Levis, M., Lowenthal, C., Mertz, D., Montserrat, N., Palmer, M. J., Saha, K. & Zartman, J., Jul 10 2019, In: Biofabrication. 11, 4, 043001.

  Research output: Contribution to journal › Review article › peer-review

  Open Access

  • Seizing
  • Civil Rights
  • Organoids
  • Technology
  • Social Responsibility

• Point-of-care sensors for the management of sepsis

  Reddy, B., Hassan, U., Seymour, C., Angus, D. C., Isbell, T. S., White, K., Weir, W., Yeh, L., Vincent, A. & Bashir, R., Sep 1 2018, In: Nature biomedical engineering. 2, 9, p. 640-648 9 p.

  Research output: Contribution to journal › Review article › peer-review

  • Point-of-Care Systems
  • Sepsis
  • Health
  • Sensors
  • Infection

• Surface functionalization of thin-film diamond for highly stable and selective biological interfaces

  Stavis, C., Clare, T. L., Butler, J. E., Radadia, A. D., Carr, R., Zeng, H., King, W. P., Carlisle, J. A., Aksimentiev, A., Bashir, R. & Hamers, R. J., Jan 18 2011, In: Proceedings of the National Academy of Sciences of the United States of America. 108, 3, p. 983-988 6 p.

  Research output: Contribution to journal › Review article › peer-review

  • Diamond
  • Photoelectron Spectroscopy
  • Carbon
  • Ethylene Glycol
  • Alkenes
• Editorial

  Delving into BioMEMS

  Bashir, R., Khademhosseini, A. & Sia, S., Nov 1 2011, In: IEEE Pulse. 2, 6, 1 p., 6088916.

  Research output: Contribution to journal › Editorial › peer-review
• Conference contribution

  3-D biofabrication using stereolithography for biology and medicine

  Bajaj, P., Chan, V., Jeong, J. H., Zorlutuna, P., Kong, H. & Bashir, R., Dec 14 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2012. p. 6805-6808 4 p. 6347557. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Stereolithography
  • Medicine
  • Electrophoresis
  • Tissue engineering
  • Scaffolds

• 3D fabrication of biological machines

  Chan, V., Kong, H. J. & Bashir, R., Oct 31 2013, 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2013. p. 314-317 4 p. 6609500. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Biomaterials
  • Cells
  • Fabrication
  • Biocompatible Materials
  • Cell Count

• Biomedical micro and nanotechnology: From lab-on-chip to building systems with cells

  Hassan, U., Bajaj, P., Damhorst, G. & Bashir, R., Dec 1 2013, 2013 Transducers and Eurosensors XXVII: The 17th International Conference on Solid-State Sensors, Actuators and Microsystems, TRANSDUCERS and EUROSENSORS 2013. p. 2539-2543 5 p. 6627323. (2013 Transducers and Eurosensors XXVII: The 17th International Conference on Solid-State Sensors, Actuators and Microsystems, TRANSDUCERS and EUROSENSORS 2013).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Nanotechnology
  • T-cells
  • Nucleic acids
  • Pathogens
  • Tissue engineering

• Biomedical micro and nanotechnology: From lab-on-chip to building with cells

  Hassan, U., Bajaj, P., Salm, E., Damhorst, G. & Bashir, R., Dec 16 2013, 71st Device Research Conference, DRC 2013 - Conference Digest. 1 p. 6633767. (Device Research Conference - Conference Digest, DRC).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Conjugated Barcoded Particles for Multiplexed Biomarker Quantification with a Microfluidic Biochip

  Prakash, S., Nagarajan, M., Doyle, P., Bashir, R. & Hassan, U., Nov 2019, 2019 IEEE Healthcare Innovations and Point of Care Technologies, HI-POCT 2019. Institute of Electrical and Electronics Engineers Inc., p. 139-142 4 p. 8962846. (2019 IEEE Healthcare Innovations and Point of Care Technologies, HI-POCT 2019).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Biochips
  • biomarkers
  • Biomarkers
  • Microfluidics
  • quantification

• Electrical flow metering of blood for point-of-care diagnostics

  Watkins, N., Hassan, U., Rodriguez, W. & Bashir, R., Dec 14 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2012. p. 3255-3257 3 p. 6346659. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Point-of-Care Systems
  • Blood
  • Microfluidics
  • Microelectrodes
  • Leukocyte Count

• Examining cellular interactions in 3-dimensional microenvironments

  Zorlutuna, P., Jeong, J. H., Kong, H. & Bashir, R., 2011, 24th European Conference on Biomaterials - Annual Conference of the European Society for Biomaterials, ESB 2011.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Graphene nanopores for nucleic acid analysis

  Shim, J., Solovyeva, V., Estrada, D., Banerjee, S., Rivera, J., Pop, E. & Bashir, R., 2012, 2012 12th IEEE International Conference on Nanotechnology, NANO 2012. 6322237

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Nanopores
  • Nucleic acids
  • Graphite
  • nucleic acids
  • Graphene

• HIV-1 IIIB capture from whole blood on magnetic microparticles

  Damhorst, G. L., Kooiman, J. M. & Bashir, R., Oct 13 2016, 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2016. Institute of Electrical and Electronics Engineers Inc., p. 5785-5788 4 p. 7592042. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS; vol. 2016-October).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Antibodies
  • Blood
  • Proteins
  • HIV-1
  • Drug therapy

• Improved graphene growth and fluorination on Cu with clean transfer to surfaces

  Wood, J. D., Schmucker, S. W., Haasch, R. T., Doidge, G. P., Nienhaus, L., Damhorst, G. L., Lyons, A. S., Gruebele, M., Bashir, R., Pop, E. & Lyding, J. W., Nov 22 2012, 2012 12th IEEE International Conference on Nanotechnology, NANO 2012. 6322101. (Proceedings of the IEEE Conference on Nanotechnology).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Fluorination
  • fluorination
  • Graphite
  • Graphene
  • graphene

• Independent control stiffness and permeability of a cell-encapsulating hydrogel; integration of bio-inspired material chemistry and microfabrication

  Jeong, J. H., Chan, V., Cha, C., Zorlutuna, P., Bashir, R. & Kong, H., Jan 1 2011, Materials Engineering and Sciences Division - Core Programming Topic at the 2011 AIChE Annual Meeting. AIChE, 1 p. (Materials Engineering and Sciences Division - Core Programming Topic at the 2011 AIChE Annual Meeting; vol. 2).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Integrated 'lab-on-a-transistor': With droplets-in-air for parallel nanoliter reactions

  Salm, E., Duarte, C., Jokilaakso, N. & Bashir, R., Jan 1 2012, Proceedings of the 16th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2012. Chemical and Biological Microsystems Society, p. 1945-1947 3 p. (Proceedings of the 16th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2012).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Transistors
  • Air
  • Heating
  • Thermal cycling
  • Sensors

• Integrated lab on chip for detection of cells and micro-organisms

  Salm, E., Duarte, C. & Bashir, R., Dec 1 2012, 2012 IEEE Photonics Conference, IPC 2012. p. 145-146 2 p. 6358531. (2012 IEEE Photonics Conference, IPC 2012).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Transistors
  • Field effect transistors
  • Lab-on-a-chip
  • Hybrid sensors
  • Nucleic acids

• Inverse-extraordianry optoconductance in Ti/Au/GaAs hybrid structures

  Newaz, A. K. M., Chang, W. J., Wallace, K. D., Wickline, S. A., Bashir, R., Gilbertson, A. M., Cohen, L. F., Edge, L. C. & Solin, S. A., Dec 1 2011, Physics of Semiconductors - 30th International Conference on the Physics of Semiconductors, ICPS-30. p. 973-974 2 p. (AIP Conference Proceedings; vol. 1399).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • hybrid structures
  • metals
  • luminous intensity
  • photons

• Mechanical communication between cardiac cell leads to synchrony in beating

  Tang, X., Bajaj, P., Bashir, R. & Saif, T., Dec 1 2012, ASME 2012 Summer Bioengineering Conference, SBC 2012. p. 333-334 2 p. (ASME 2012 Summer Bioengineering Conference, SBC 2012).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Elastic moduli
  • Stiffness
  • Communication

• MEMS mass sensors with uniform sensitivity for monitoring cellular apoptosis

  Park, K., Millet, L., Kim, N., Li, H., Hsia, K. J., Aluru, N. R. & Bashir, R., Sep 1 2011, 2011 16th International Solid-State Sensors, Actuators and Microsystems Conference, TRANSDUCERS'11. p. 759-762 4 p. 5969307. (2011 16th International Solid-State Sensors, Actuators and Microsystems Conference, TRANSDUCERS'11).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Cell death
  • MEMS
  • Cell growth
  • Monitoring
  • Sensors

• Mobile biosensing using the sensing capabilities of smartphone cameras

  Cunningham, B. T., Long, K. D., Yu, H., Chen, W., Sun, F., Ornob, A., Ganguli, A., Lumetta, S. & Bashir, R., Jan 4 2018, 2017 IEEE MTT-S International Microwave Workshop Series on Advanced Materials and Processes for RF and THz Applications, IMWS-AMP 2017. Institute of Electrical and Electronics Engineers Inc., p. 1-3 3 p. (2017 IEEE MTT-S International Microwave Workshop Series on Advanced Materials and Processes for RF and THz Applications, IMWS-AMP 2017; vol. 2018-January).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Smartphones
  • cameras
  • Image processing
  • Health
  • Cameras

• Nanopore sensors for DNA analysis

  Solovyeva, V., Venkatesan, B. M., Shim, J., Banerjee, S., Rivera, J. & Bashir, R., Jul 23 2012, Micro- and Nanotechnology Sensors, Systems, and Applications IV. 83730O. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 8373).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Nanopore
  • Nanopores
  • Sensor
  • DNA
  • deoxyribonucleic acid
• Article

  3-D biofabrication using stereolithography for biology and medicine.

  Bajaj, P., Chan, V., Jeong, J. H., Zorlutuna, P., Kong, H. & Bashir, R., 2012, In: Conference proceedings : ... Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Conference. p. 6805-6808 4 p.

  Research output: Contribution to journal › Article › peer-review

  • Stereolithography
  • Medicine
  • Electrophoresis
  • Tissue engineering
  • Scaffolds

• 3D printing enables separation of orthogonal functions within a hydrogel particle

  Raman, R., Clay, N. E., Sen, S., Melhem, M., Qin, E., Kong, H. & Bashir, R., Jan 1 2016, In: Biomedical microdevices. 18, 3, 49.

  Research output: Contribution to journal › Article › peer-review

  • Orthogonal functions
  • Three-Dimensional Printing
  • Hydrogels
  • Iron oxides
  • Polyethylene glycols

• A liposome-based ion release impedance sensor for biological detection

  Damhorst, G. L., Smith, C. E., Salm, E. M., Sobieraj, M. M., Ni, H., Kong, H. & Bashir, R., Oct 2013, In: Biomedical microdevices. 15, 5, p. 895-905 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Liposomes
  • Electric Impedance
  • Biomolecules
  • Ions
  • Pathogens

• A microfabricated electrical differential counter for the selective enumeration of CD4+ T lymphocytes

  Watkins, N. N., Sridhar, S., Cheng, X., Chen, G. D., Toner, M., Rodriguez, W. & Bashir, R., Apr 21 2011, In: Lab on a chip. 11, 8, p. 1437-1447 11 p.

  Research output: Contribution to journal › Article › peer-review

  • T-cells
  • T-Lymphocytes
  • Leukocytes
  • Immobilized Antibodies
  • Cell Count

• A microfluidic biochip platform for electrical quantification of proteins

  Valera, E., Berger, J., Hassan, U., Ghonge, T., Liu, J., Rappleye, M., Winter, J., Abboud, D., Haidry, Z., Healey, R., Hung, N. T., Leung, N., Mansury, N., Hasnain, A., Lannon, C., Price, Z., White, K. & Bashir, R., May 21 2018, In: Lab on a chip. 18, 10, p. 1461-1470 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Biochips
  • Biomarkers
  • Microfluidics
  • Proteins
  • Sepsis

• Biaxial Dielectrophoresis Force Spectroscopy: A Stoichiometric Approach for Examining Intermolecular Weak Binding Interactions

  Park, I. S., Kwak, T. J., Lee, G., Son, M., Choi, J. W., Choi, S., Nam, K., Lee, S. Y., Chang, W. J., Eom, K., Yoon, D. S., Lee, S., Bashir, R. & Lee, S. W., Apr 26 2016, In: ACS Nano. 10, 4, p. 4011-4019 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Electrophoresis
  • Spectroscopy
  • loading rate
  • pulling
  • spectroscopy

• Biodegradable Monocrystalline Silicon Photovoltaic Microcells as Power Supplies for Transient Biomedical Implants

  Lu, L., Yang, Z., Meacham, K., Cvetkovic, C., Corbin, E. A., Vázquez-Guardado, A., Xue, M., Yin, L., Boroumand, J., Pakeltis, G., Sang, T., Yu, K. J., Chanda, D., Bashir, R., Gereau, R. W., Sheng, X. & Rogers, J. A., Jun 5 2018, In: Advanced Energy Materials. 8, 16, 1703035.

  Research output: Contribution to journal › Article › peer-review

  • Monocrystalline silicon
  • Oils and fats
  • Wavelength
  • Skin
  • Tissue

• Bionanoscience in health and medicine

  Bashir, R., May 2012, In: Proceedings of the IEEE. 100, 5, p. 1015-1016 2 p., 6183039.

  Research output: Contribution to journal › Article › peer-review

  • Nanotechnology
  • Medicine
  • Health
  • Biological systems
  • DNA

• Cardiac myocytes' dynamic contractile behavior differs depending on heart segment

  De Souza, E. J., Ahmed, W., Chan, V., Bashir, R. & Saif, T., Feb 2013, In: Biotechnology and bioengineering. 110, 2, p. 628-636 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Cardiac Myocytes
  • Muscle Cells
  • Heart
  • Video Microscopy
  • Microscopic examination

• Cardiomyocyte Imaging Using Real-Time Spatial Light Interference Microscopy (SLIM)

  Bhaduri, B., Wickland, D., Wang, R., Chan, V., Bashir, R. & Popescu, G., Feb 15 2013, In: PloS one. 8, 2, e56930.

  Research output: Contribution to journal › Article › peer-review

  • Interference Microscopy
  • Light interference
  • cardiomyocytes
  • Liquid Crystals
  • Microscopic examination

• Characterization of mass and swelling of hydrogel microstructures using MEMS resonant mass sensor arrays

  Millet, L. J., Corbin, E. A., Free, R., Park, K., Kong, H., King, W. P. & Bashir, R., Aug 20 2012, In: Small. 8, 16, p. 2555-2562 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Hydrogels
  • Polyethylene Glycol Dimethacrylate Hydrogel
  • Sensor arrays
  • Swelling
  • MEMS

• Control of nanoscale environment to improve stability of immobilized proteins on diamond surfaces

  Radadia, A. D., Stavis, C. J., Carr, R., Zeng, H., King, W. P., Carlisle, J. A., Aksimentiev, A., Hamers, R. J. & Bashir, R., Mar 22 2011, In: Advanced Functional Materials. 21, 6, p. 1040-1050 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Immobilized Proteins
  • Diamond
  • Diamonds
  • Proteins
  • proteins

• Coupled heterogeneous nanowire-nanoplate planar transistor sensors for giant (>10 V/pH) nernst response

  Go, J., Nair, P. R., Reddy, B., Dorvel, B., Bashir, R. & Alam, M. A., Jul 24 2012, In: ACS Nano. 6, 7, p. 5972-5979 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Nanowires
  • Transistors
  • nanowires
  • transistors
  • Ion sensitive field effect transistors

• Design and integration of a problem-based biofabrication course into an undergraduate biomedical engineering curriculum

  Raman, R., Mitchell, M., Perez-Pinera, P., Bashir, R. & DeStefano, L., Sep 21 2016, In: Journal of Biological Engineering. 10, 1, 10.

  Research output: Contribution to journal › Article › peer-review

  • Biomedical Engineering
  • Biomedical engineering
  • Curricula
  • Curriculum
  • Students

• Detecting sepsis by observing neutrophil motility

  Hassan, U., Valera, E. & Bashir, R., Apr 1 2018, In: Nature biomedical engineering. 2, 4, p. 197-198 2 p.

  Research output: Contribution to journal › Article › peer-review

• Detection and quantification of methylation in DNA using solid-state nanopores

  Shim, J., Humphreys, G. I., Venkatesan, B. M., Munz, J. M., Zou, X., Sathe, C., Schulten, K., Kosari, F., Nardulli, A. M., Vasmatzis, G. & Bashir, R., 2013, In: Scientific reports. 3, 1389.

  Research output: Contribution to journal › Article › peer-review

  • Nanopores
  • DNA Methylation
  • Methylation
  • Epigenomics
  • 5-Methylcytosine

• Detection of silver ions using dielectrophoretic tweezers-based force spectroscopy

  Choi, S., Lee, G., Park, I. S., Son, M., Kim, W., Lee, H., Lee, S. Y., Na, S., Yoon, D. S., Bashir, R., Park, J. & Lee, S. W., Jan 1 2016, In: Analytical chemistry. 88, 22, p. 10867-10875 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Polynucleotides
  • Spectroscopy
  • Silver
  • Metal ions
  • Heavy ions

• Development of miniaturized walking biological machines

  Chan, V., Park, K., Collens, M. B., Kong, H., Saif, T. A. & Bashir, R., 2012, In: Scientific reports. 2, 857.

  Research output: Contribution to journal › Article › peer-review

  • Locomotion
  • Cardiac Myocytes
  • Walking
  • Leg
  • Friction

• Direct characterization of hydrodynamic loading on a microelectromechanical systems microstructure

  Mehrnezhad, A., Bashir, R. & Park, K., Mar 14 2016, In: Applied Physics Letters. 108, 11, 114101.

  Research output: Contribution to journal › Article › peer-review

  • microelectromechanical systems
  • hydrodynamics
  • microstructure
  • characterization
  • viscous fluids

• Direct DNA sequencing using nanopore sensors

  Bashir, R., Apr 1 2013, In: Genetic Engineering and Biotechnology News. 33, 7, p. 34-35+45

  Research output: Contribution to journal › Article › peer-review

• Directed cell growth and alignment on protein-patterned 3D hydrogels with stereolithography: In this tissue engineering application, PEG-based hydrogels with different fibronectin patterns were fabricated and the influence of the protein patterns on shape and direction of seeded cells was studied

  Chan, V., Collens, M. B., Jeong, J. H., Park, K., Kong, H. & Bashir, R., Sep 1 2012, In: Virtual and Physical Prototyping. 7, 3, p. 219-228 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Stereolithography
  • Fibronectin
  • Hydrogel
  • Tissue Engineering
  • Cell growth

• Dynamic mechanical measurement of the viscoelasticity of single adherent cells

  Corbin, E. A., Adeniba, O. O., Ewoldt, R. H. & Bashir, R., Feb 29 2016, In: Applied Physics Letters. 108, 9, 093701.

  Research output: Contribution to journal › Article › peer-review

  • mechanical measurement
  • viscoelasticity
  • cells
  • sensors
  • microelectromechanical systems

• Effect of biointerfacing linker chemistries on the sensitivity of silicon nanowires for protein detection

  Dorvel, B., Reddy, B. & Bashir, R., Oct 15 2013, In: Analytical chemistry. 85, 20, p. 9493-9500 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Nanowires
  • Silicon
  • Oxides
  • Proteins
  • Polyethylene glycols