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Review article
Application of Top-Down and bottom-up systems approaches in ruminant physiology and metabolism
Shahzad, K. & Loor, J. J., 2012, In: Current Genomics. 13, 5, p. 379-394 16 p.Research output: Contribution to journal › Review article › peer-review
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Assessing and managing body condition score for the prevention of metabolic disease in dairy cows
Roche, J. R., Kay, J. K., Friggens, N. C., Loor, J. J. & Berry, D. P., Jul 1 2013, In: Veterinary Clinics of North America - Food Animal Practice. 29, 2, p. 323-336 14 p.Research output: Contribution to journal › Review article › peer-review
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Functional role of PPARs in ruminants: Potential targets for fine-tuning metabolism during growth and lactation
Bionaz, M., Chen, S., Khan, M. J. & Loor, J. J., 2013, In: PPAR Research. 684159.Research output: Contribution to journal › Review article › peer-review
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High-throughput methods redefine the rumen microbiome and its relationship with nutrition and metabolism
McCann, J. C., Wickersham, T. A. & Loor, J. J., Jun 8 2014, In: Bioinformatics and Biology Insights. 8, p. 109-125 17 p.Research output: Contribution to journal › Review article › peer-review
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Managing the grazing dairy cow through the transition period: A review
Kay, J. K., Loor, J. J., Heiser, A., McGowan, J. & Roche, J. R., Jan 1 2015, In: Animal Production Science. 55, 7, p. 936-942 7 p.Research output: Contribution to journal › Review article › peer-review
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Potential of Mulberry Leaf Biomass and Its Flavonoids to Improve Production and Health in Ruminants: Mechanistic Insights and Prospects
Hassan, F. U., Arshad, M. A., Li, M., Rehman, M. S. U., Loor, J. J. & Huang, J., Nov 9 2020, In: Animals. 10, 11, p. 1-24 24 p., 2076.Research output: Contribution to journal › Review article › peer-review
Open Access -
Regulation of energy metabolism by long-chain fatty acids
Nakamura, M. T., Yudell, B. E. & Loor, J. J., Jan 1 2014, In: Progress in Lipid Research. 53, 1, p. 124-144 21 p.Research output: Contribution to journal › Review article › peer-review
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Review: Enhancing gastrointestinal health in dairy cows
Plaizier, J. C., Mesgaran, M. D., Derakhshani, H., Golder, H., Khafipour, E., Kleen, J. L., Lean, I., Loor, J., Penner, G. & Zebeli, Q., Dec 1 2018, In: Animal. 12, s2, p. S399-S418Research output: Contribution to journal › Review article › peer-review
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Ruminant metabolic systems biology: Reconstruction and integration of transcriptome dynamics underlying functional responses of tissues to nutrition and physiological state
Bionaz, M. & Loor, J. J., 2012, In: Gene Regulation and Systems Biology. 2012, 6, p. 109-125 17 p.Research output: Contribution to journal › Review article › peer-review
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Editorial
Physiological and nutritional roles of PPAR across species
Bionaz, M., Hausman, G. J., Loor, J. J. & Mandard, S., 2013, In: PPAR Research. 807156.Research output: Contribution to journal › Editorial › peer-review
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Chapter
Mammary Gland: Gene Networks Controlling Development and Involution
Loor, J. J., Bionaz, M. & Hurley, W. L., Jan 1 2011, Encyclopedia of Dairy Sciences: Second Edition. Elsevier Inc., p. 346-351 6 p.Research output: Chapter in Book/Report/Conference proceeding › Chapter
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Mammary Gland: Growth, Development and Involution
Hurley, W. L. & Loor, J. J., Jan 1 2011, Encyclopedia of Dairy Sciences: Second Edition. Elsevier Inc., p. 338-345 8 p.Research output: Chapter in Book/Report/Conference proceeding › Chapter
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Nutritional systems biology to elucidate adaptations in lactation physiology of dairy cows
Vailati-Riboni, M., Elolimy, A. & Loor, J. J., Jan 1 2016, Systems Biology in Animal Production and Health, Vol. 2. Springer International Publishing, p. 97-125 29 p.Research output: Chapter in Book/Report/Conference proceeding › Chapter
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Systems biology and animal nutrition: Insights from the dairy cow during growth and the lactation cycle
Loor, J. J., Bionaz, M. & Invernizzi, G., Oct 10 2011, Systems Biology and Livestock Science. Wiley Blackwell, p. 215-245 31 p.Research output: Chapter in Book/Report/Conference proceeding › Chapter
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Article
Abundance of ruminal bacteria, epithelial gene expression, and systemic biomarkers of metabolism and inflammation are altered during the peripartal period in dairy cows
Minuti, A., Palladino, A., Khan, M. J., Alqarni, S., Agrawal, A., Piccioli-Capelli, F., Hidalgo, F., Cardoso, F. C., Trevisi, E. & Loor, J. J., Dec 1 2015, In: Journal of Dairy Science. 98, 12, p. 8940-8951 12 p.Research output: Contribution to journal › Article › peer-review
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Acute mammary and liver transcriptome responses after an intramammary escherichia coli lipopolysaccharide challenge in postpartal dairy cows
Minuti, A., Zhou, Z., Graugnard, D. E., Rodriguezzas, S. L., Palladino, A. R., Cardoso, F. C., Trevisi, E. & Loor, J. J., 2015, In: Physiological Reports. 3, 4, e12388.Research output: Contribution to journal › Article › peer-review
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Acyl-CoA synthetase short-chain family member 2 (ACSS2) is regulated by SREBP-1 and plays a role in fatty acid synthesis in caprine mammary epithelial cells
Xu, H., Luo, J., Ma, G., Zhang, X., Yao, D., Li, M. & Loor, J. J., Feb 1 2018, In: Journal of Cellular Physiology. 233, 2, p. 1005-1016 12 p.Research output: Contribution to journal › Article › peer-review
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Adipocyte differentiation-related protein promotes lipid accumulation in goat mammary epithelial cells
Shi, H. B., Yu, K., Luo, J., Li, J., Tian, H. B., Zhu, J. J., Sun, Y. T., Yao, D. W., Xu, H. F., Shi, H. P. & Loor, J. J., Oct 1 2015, In: Journal of Dairy Science. 98, 10, p. 6954-6964 11 p., 73830.Research output: Contribution to journal › Article › peer-review
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Adipose and liver gene expression profiles in response to treatment with a nonsteroidal antiinflammatory drug after calving in grazing dairy cows
Vailati Riboni, M., Meier, S., Priest, N. V., Burke, C. R., Kay, J. K., McDougall, S., Mitchell, M. D., Walker, C. G., Crookenden, M., Heiser, A., Roche, J. R. & Loor, J. J., May 1 2015, In: Journal of Dairy Science. 98, 5, p. 3079-3085 7 p.Research output: Contribution to journal › Article › peer-review
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Akt Serine/Threonine Kinase 1 Regulates de Novo Fatty Acid Synthesis through the Mammalian Target of Rapamycin/Sterol Regulatory Element Binding Protein 1 Axis in Dairy Goat Mammary Epithelial Cells
Zhang, T., Huang, J., Yi, Y., Zhang, X., Loor, J. J., Cao, Y., Shi, H. & Luo, J., Feb 7 2018, In: Journal of Agricultural and Food Chemistry. 66, 5, p. 1197-1205 9 p.Research output: Contribution to journal › Article › peer-review
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Alterations in hepatic FGF21, co-regulated genes, and upstream metabolic genes in response to nutrition, ketosis and inflammation in peripartal holstein cows
Akbar, H., Batistel, F., Drackley, J. K. & Loor, J. J., Oct 9 2015, In: PloS one. 10, 10, e0139963.Research output: Contribution to journal › Article › peer-review
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Amino acids and the regulation of oxidative stress and immune function in dairy cattle
Coleman, D. N., Lopreiato, V., Alharthi, A. & Loor, J. J., Aug 18 2020, In: Journal of animal science. 98, p. S175-S193Research output: Contribution to journal › Article › peer-review
Open Access -
A novel dynamic impact approach (DIA) for functional analysis of time-course omics studies: Validation using the bovine mammary transcriptome
Bionaz, M., Periasamy, K., Rodriguez-Zas, S. L., Hurley, W. L. & Loor, J. J., Mar 16 2012, In: PloS one. 7, 3, e32455.Research output: Contribution to journal › Article › peer-review
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Arginine Supply Impacts the Expression of Candidate microRNA Controlling Milk Casein Yield in Bovine Mammary Tissue
Zhang, X., Wang, Y., Wang, M., Zhou, G., Chen, L., Ding, L., Bu, D. & Loor, J., May 5 2020, In: Animals. 10, 5, 797.Research output: Contribution to journal › Article › peer-review
Open Access -
Association between the expression of miR-26 and goat milk fatty acids
Wang, H., Zhu, J., He, Q., Loor, J. J. & Luo, J., Dec 2018, In: Reproduction in Domestic Animals. 53, 6, p. 1478-1482 5 p.Research output: Contribution to journal › Article › peer-review
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Association of residual feed intake with abundance of ruminal bacteria and biopolymer hydrolyzing enzyme activities during the peripartal period and early lactation in Holstein dairy cows
Elolimy, A. A., Arroyo, J. M., Batistel, F., Iakiviak, M. A. & Loor, J. J., May 14 2018, In: Journal of Animal Science and Biotechnology. 9, 1, 43.Research output: Contribution to journal › Article › peer-review
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Association of UDP-galactose-4-epimerase with milk protein concentration in the Chinese Holstein population
Li, C., Cai, W., Liu, S., Zhou, C., Cao, M., Yin, H., Sun, D., Zhang, S. & Loor, J. J., Nov 2020, In: Asian-Australasian Journal of Animal Sciences. 33, 11, p. 1725-1731 7 p.Research output: Contribution to journal › Article › peer-review
Open Access -
Better postpartal performance in dairy cows supplemented with rumen-protected methionine compared with choline during the peripartal period
Zhou, Z., Vailati-Riboni, M., Trevisi, E., Drackley, J. K., Luchini, D. N. & Loor, J. J., Nov 1 2016, In: Journal of Dairy Science. 99, 11, p. 8716-8732 17 p.Research output: Contribution to journal › Article › peer-review
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Bioinformatics analysis of microRNA and putative target genes in bovine mammary tissue infected with Streptococcus uberis
Naeem, A., Zhong, K., Moisá, S. J., Drackley, J. K., Moyes, K. M. & Loor, J. J., Nov 2012, In: Journal of Dairy Science. 95, 11, p. 6397-6408 12 p.Research output: Contribution to journal › Article › peer-review
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Bioinformatics analysis of transcriptome dynamics during growth in Angus cattle longissimus muscle
Moisá, S. J., Shike, D. W., Graugnard, D. E., Rodriguez-Zas, S. L., Everts, R. E., Lewin, H. A., Faulkner, D. B., Berger, L. L. & Loor, J. J., 2013, In: Bioinformatics and Biology Insights. 7, p. 253-270 18 p.Research output: Contribution to journal › Article › peer-review
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Bioinformatics and gene network analyses of the swine mammary gland transcriptome during late gestation
Zhao, W., Shahzad, K., Jiang, M., Graugnard, D. E., Rodriguez-Zas, S. L., Luo, J., Loor, J. J. & Hurley, W. L., Jul 19 2013, In: Bioinformatics and Biology Insights. 7, p. 193-216 24 p.Research output: Contribution to journal › Article › peer-review
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Biomarkers of inflammation, metabolism, and oxidative stress in blood, liver, and milk reveal a better immunometabolic status in peripartal cows supplemented with Smartamine M or MetaSmart
Osorio, J. S., Trevisi, E., Ji, P., Drackley, J. K., Luchini, D., Bertoni, G. & Loor, J. J., Dec 1 2014, In: Journal of Dairy Science. 97, 12, p. 7437-7450 14 p.Research output: Contribution to journal › Article › peer-review
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Blood immunometabolic indices and polymorphonuclear neutrophil function in peripartum dairy cows are altered by level of dietary energy prepartum
Graugnard, D. E., Bionaz, M., Trevisi, E., Moyes, K. M., Salak-Johnson, J. L., Wallace, R. L., Drackley, J. K., Bertoni, G. & Loor, J. J., Apr 2012, In: Journal of Dairy Science. 95, 4, p. 1749-1758 10 p.Research output: Contribution to journal › Article › peer-review
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Body condition alters glutathione and nuclear factor erythroid 2-like 2 (NFE2L2)–related antioxidant network abundance in subcutaneous adipose tissue of periparturient Holstein cows
Liang, Y., Alharthi, A. S., Bucktrout, R., Elolimy, A. A., Lopreiato, V., Martinez-Cortés, I., Xu, C., Fernandez, C., Trevisi, E. & Loor, J. J., Jul 2020, In: Journal of Dairy Science. 103, 7, p. 6439-6453 15 p.Research output: Contribution to journal › Article › peer-review
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Body condition score and plane of nutrition prepartum affect adipose tissue transcriptome regulators of metabolism and inflammation in grazing dairy cows during the transition period
Vailati-Riboni, M., Kanwal, M., Bulgari, O., Meier, S., Priest, N. V., Burke, C. R., Kay, J. K., McDougall, S., Mitchell, M. D., Walker, C. G., Crookenden, M., Heiser, A., Roche, J. R. & Loor, J. J., Jan 1 2016, In: Journal of Dairy Science. 99, 1, p. 758-770 13 p.Research output: Contribution to journal › Article › peer-review
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Body condition score at calving affects systemic and hepatic transcriptome indicators of inflammation and nutrient metabolism in grazing dairy cows
Akbar, H., Grala, T. M., Vailati Riboni, M., Cardoso, F. C., Verkerk, G., McGowan, J., Macdonald, K., Webster, J., Schutz, K., Meier, S., Matthews, L., Roche, J. R. & Loor, J. J., Feb 1 2015, In: Journal of Dairy Science. 98, 2, p. 1019-1032 14 p.Research output: Contribution to journal › Article › peer-review
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Body condition score prior to parturition is associated with plasma and adipose tissue biomarkers of lipid metabolism and inflammation in Holstein cows
Alharthi, A., Zhou, Z., Lopreiato, V., Trevisi, E. & Loor, J. J., Jan 15 2018, In: Journal of Animal Science and Biotechnology. 9, 1, 12.Research output: Contribution to journal › Article › peer-review
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Calving body condition score affects indicators of health in grazing dairy cows
Roche, J. R., Macdonald, K. A., Schütz, K. E., Matthews, L. R., Verkerk, G. A., Meier, S., Loor, J. J., Rogers, A. R., McGowan, J., Morgan, S. R., Taukiri, S. & Webster, J. R., Sep 2013, In: Journal of Dairy Science. 96, 9, p. 5811-5825 15 p.Research output: Contribution to journal › Article › peer-review
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cAMP response element binding protein 1 (CREB1) promotes monounsaturated fatty acid synthesis and triacylglycerol accumulation in goat mammary epithelial cells
Yao, D., Yang, C., Ma, J., Chen, L., Luo, J., Ma, Y. & Loor, J. J., Oct 2020, In: Animals. 10, 10, p. 1-11 11 p., 1871.Research output: Contribution to journal › Article › peer-review
Open Access -
Cardamonin Reduces Acetaminophen-Induced Acute Liver Injury in Mice via Activating Autophagy and NFE2L2 Signaling
Xu, Q., Fan, Y., Loor, J. J., Liang, Y., Sun, X., Jia, H., Zhao, C. & Xu, C., Nov 13 2020, In: Frontiers in Pharmacology. 11, 601716.Research output: Contribution to journal › Article › peer-review
Open Access -
Cattle genomics and its implications for future nutritional strategies for dairy cattle
Seo, S., Larkin, D. M. & Loor, J. J., Mar 2013, In: Animal. 7, SUPPL.1, p. 172-183 12 p.Research output: Contribution to journal › Article › peer-review
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Central role of the PPARγ gene network in coordinating beef cattle intramuscular adipogenesis in response to weaning age and nutrition
Moisá, S. J., Shike, D. W., Faulkner, D. B., Meteer, W. T., Keisler, D. & Loor, J. J., Jan 8 2014, In: Gene Regulation and Systems Biology. 2014, 8, p. 17-32 16 p.Research output: Contribution to journal › Article › peer-review
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Change in subcutaneous adipose tissue metabolism and gene network expression during the transition period in dairy cows, including differences due to sire genetic merit1
Khan, M. J., Hosseini, A., Burrell, S., Rocco, S. M., McNamara, J. P. & Loor, J. J., Apr 2013, In: Journal of Dairy Science. 96, 4, p. 2171-2182 12 p.Research output: Contribution to journal › Article › peer-review
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Characterization of the liver X receptor-dependent regulatory mechanism of goat stearoyl-coenzyme A desaturase 1 gene by linoleic acid
Yao, D. W., Luo, J., He, Q. Y., Li, J., Wang, H., Shi, H. B., Xu, H. F., Wang, M. & Loor, J. J., May 1 2016, In: Journal of Dairy Science. 99, 5, p. 3945-3957 13 p.Research output: Contribution to journal › Article › peer-review
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Circ09863 Regulates Unsaturated Fatty Acid Metabolism by Adsorbing miR-27a-3p in Bovine Mammary Epithelial Cells
Chen, Z., Zhou, J., Wang, M., Liu, J., Zhang, L., Loor, J. J., Liang, Y., Wu, H. & Yang, Z., Aug 12 2020, In: Journal of Agricultural and Food Chemistry. 68, 32, p. 8589-8601 13 p.Research output: Contribution to journal › Article › peer-review
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Circulating amino acids in blood plasma during the peripartal period in dairy cows with different liver functionality index
Zhou, Z., Loor, J. J., Piccioli-Cappelli, F., Librandi, F., Lobley, G. E. & Trevisi, E., Mar 1 2016, In: Journal of Dairy Science. 99, 3, p. 2257-2267 11 p.Research output: Contribution to journal › Article › peer-review
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Clock circadian regulator (CLOCK) gene network expression patterns in bovine adipose, liver, and mammary gland at 3 time points during the transition from pregnancy into lactation
Wang, M., Zhou, Z., Khan, M. J., Gao, J. & Loor, J. J., Jul 1 2015, In: Journal of Dairy Science. 98, 7, p. 4601-4612 12 p.Research output: Contribution to journal › Article › peer-review
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Comprehensive Transcriptome Profiling of Dairy Goat Mammary Gland Identifies Genes and Networks Crucial for Lactation and Fatty Acid Metabolism
Li, C., Zhu, J., Shi, H., Luo, J., Zhao, W., Shi, H., Xu, H., Wang, H. & Loor, J. J., Sep 25 2020, In: Frontiers in Genetics. 11, 878.Research output: Contribution to journal › Article › peer-review
Open Access -
Corium molecular biomarkers reveal a beneficial effect on hoof transcriptomics in peripartal dairy cows supplemented with zinc, manganese, and copper from amino acid complexes and cobalt from cobalt glucoheptonate
Osorio, J. S., Batistel, F., Garrett, E. F., Elhanafy, M. M., Tariq, M. R., Socha, M. T. & Loor, J. J., Dec 1 2016, In: Journal of Dairy Science. 99, 12, p. 9974-9982 9 p.Research output: Contribution to journal › Article › peer-review
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Corium tissue expression of genes associated with inflammation, oxidative stress, and keratin formation in relation to lameness in dairy cows
Osorio, J. S., Fraser, B. C., Graugnard, D. E., Singh, S. S., Drackley, J. K., Garrett, E. F. & Loor, J. J., Nov 2012, In: Journal of Dairy Science. 95, 11, p. 6388-6396 9 p.Research output: Contribution to journal › Article › peer-review