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  ¹³C-lutein is differentially distributed in tissues of an adult female rhesus macaque following a single oral administration: a pilot study

  Jeon, S., Li, Q., Rubakhin, S. S., Sweedler, J. V., Smith, J. W., Neuringer, M., Kuchan, M. & Erdman, J. W., Jan 2019, In: Nutrition Research. 61, p. 102-108 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Lutein
  • Macaca mulatta
  • Oral Administration
  • Tissue Distribution
  • Haplorhini

• 1-methylthio-d-xylulose 5-phosphate methylsulfurylase: A novel route to 1-deoxy-d-xylulose 5-phosphate in Rhodospirillum rubrum

  Warlick, B. P., Evans, B. S., Erb, T. J., Ramagopal, U. A., Sriram, J., Imker, H. J., Sauder, J. M., Bonanno, J. B., Burley, S. K., Tabita, F. R., Almo, S. C., Sweedler, J. S. & Gerlt, J. A., Oct 23 2012, In: Biochemistry. 51, 42, p. 8324-8326 3 p.

  Research output: Contribution to journal › Article › peer-review

  • xylulose-5-phosphate
  • Rhodospirillum rubrum
  • ribose 1-phosphate
  • dimethyl disulfide
  • 5'-methylthioadenosine

• Accurate assignment of significance to neuropeptide identifications using monte carlo K-permuted decoy databases

  Akhtar, M. N., Southey, B. R., Andrén, P. E., Sweedler, J. V. & Rodriguez-Zas, S. L., Oct 17 2014, In: PloS one. 9, 10, e111112.

  Research output: Contribution to journal › Article › peer-review

  • neuropeptides
  • Neuropeptides
  • Databases
  • testing
  • peptides

• A D-amino acid-containing neuropeptide discovery funnel

  Livnat, I., Tai, H. C., Jansson, E. T., Bai, L., Romanova, E. V., Chen, T. T., Yu, K., Chen, S. A., Zhang, Y., Wang, Z. Y., Liu, D. D., Weiss, K. R., Jing, J. & Sweedler, J. V., Dec 6 2016, In: Analytical Chemistry. 88, 23, p. 11868-11876 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Neuropeptides
  • Amino Acids
  • Peptides
  • Mass spectrometry
  • Marfey's reagent

• A high spatiotemporal study of somatic exocytosis with scanning electrochemical microscopy and nanoITIES electrodes

  Welle, T. M., Alanis, K., Colombo, M. L., Sweedler, J. V. & Shen, M., 2018, In: Chemical Science. 9, 22, p. 4937-4941 5 p.

  Research output: Contribution to journal › Article › peer-review

  • Cellular radio systems
  • Carisoprodol
  • Microscopic examination
  • Acetylcholine
  • Neurotransmitter Agents

• Analyses of pig genomes provide insight into porcine demography and evolution

  Groenen, M. A. M., Archibald, A. L., Uenishi, H., Tuggle, C. K., Takeuchi, Y., Rothschild, M. F., Rogel-Gaillard, C., Park, C., Milan, D., Megens, H. J., Li, S., Larkin, D. M., Kim, H., Frantz, L. A. F., Caccamo, M., Ahn, H., Aken, B. L., Anselmo, A., Anthon, C., Auvil, L. & 116 others, Badaoui, B., Beattie, C. W., Bendixen, C., Berman, D., Blecha, F., Blomberg, J., Bolund, L., Bosse, M., Botti, S., Bujie, Z., Bystrom, M., Capitanu, B., Carvalho-Silva, D., Chardon, P., Chen, C., Cheng, R., Choi, S. H., Chow, W., Clark, R. C., Clee, C., Crooijmans, R. P. M. A., Dawson, H. D., Dehais, P., De Sapio, F., Dibbits, B., Drou, N., Du, Z. Q., Eversole, K., Fadista, J., Fairley, S., Faraut, T., Faulkner, G. J., Fowler, K. E., Fredholm, M., Fritz, E., Gilbert, J. G. R., Giuffra, E., Gorodkin, J., Griffin, D. K., Harrow, J. L., Hayward, A., Howe, K., Hu, Z. L., Humphray, S. J., Hunt, T., Hornshoøj, H., Jeon, J. T., Jern, P., Jones, M., Jurka, J., Kanamori, H., Kapetanovic, R., Kim, J., Kim, J. H., Kim, K. W., Kim, T. H., Larson, G., Lee, K., Lee, K. T., Leggett, R., Lewin, H. A., Li, Y., Liu, W., Loveland, J. E., Lu, Y., Lunney, J. K., Ma, J., Madsen, O., Mann, K., Matthews, L., McLaren, S., Morozumi, T., Murtaugh, M. P., Narayan, J., Nguyen, D. T., Ni, P., Oh, S. J., Onteru, S., Panitz, F., Park, E. W., Park, H. S., Pascal, G., Paudel, Y., Perez-Enciso, M., Ramirez-Gonzalez, R., Reecy, J. M., Rodriguez-Zas, S., Rohrer, G. A., Rund, L., Sang, Y., Schachtschneider, K., Schraiber, J. G., Schwartz, J., Scobie, L., Scott, C., Searle, S., Servin, B., Southey, B. R., Sperber, G., Stadler, P., Sweedler, J. V., Tafer, H., Thomsen, B., Wali, R., Wang, J., Wang, J., White, S., Xu, X., Yerle, M., Zhang, G., Zhang, J., Zhang, J., Zhao, S., Rogers, J., Churcher, C. & Schook, L. B., Nov 15 2012, In: Nature. 491, 7424, p. 393-398 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Sus scrofa
  • Swine
  • Genome
  • Demography
  • Smell

• Analysis of endogenous nucleotides by single cell capillary electrophoresis-mass spectrometry

  Liu, J. X., Aerts, J. T., Rubakhin, S. S., Zhang, X. X. & Sweedler, J. V., Oct 15 2014, In: Analyst. 139, 22, p. 5835-5842 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Capillary electrophoresis
  • Aplysia
  • Capillary Electrophoresis
  • Mass spectrometry
  • Electrospray ionization

• A neuron-in-capillary platform for facile collection and mass spectrometric characterization of a secreted neuropeptide

  Lee, C. Y., Fan, Y., Rubakhin, S. S., Yoon, S. & Sweedler, J. V., Jun 1 2016, In: Scientific reports. 6, 26940.

  Research output: Contribution to journal › Article › peer-review

  • Neuropeptides
  • Lab-On-A-Chip Devices
  • Aplysia
  • Mass Spectrometry
  • Neurons

• A one-step matrix application method for MALDI mass spectrometry imaging of bacterial colony biofilms

  Li, B., Comi, T. J., Si, T., Dunham, S. J. B. & Sweedler, J. V., Nov 1 2016, In: Journal of Mass Spectrometry. 51, 11, p. 1030-1035 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Biofilms
  • Mass spectrometry
  • Agar
  • Imaging techniques
  • Ionization

• Aplysia allatotropin-related peptide and its newly identified D-amino acid-containing epimer both activate a receptor and a neuronal target

  Checco, J. W., Zhang, G., Yuan, W. D., Le, Z. W., Jing, J. & Sweedler, J. V., Oct 26 2019, In: Journal of Biological Chemistry. 293, 43, p. 16862-16873 12 p.

  Research output: Contribution to journal › Article › peer-review

  • allatotropin
  • Aplysia
  • Amino Acids
  • Peptides
  • Isomerization

• Aplysia locomotion: Network and behavioral actions of GdFFD, a D-amino acid-containing neuropeptide

  Yang, C. Y., Yu, K., Wang, Y., Chen, S. A., Liu, D. D., Wang, Z. Y., Su, Y. N., Yang, S. Z., Chen, T. T., Livnat, I., Vilim, F. S., Cropper, E. C., Weiss, K. R., Sweedler, J. V. & Jing, J., Jan 1 2016, In: PloS one. 11, 1, e0147335.

  Research output: Contribution to journal › Article › peer-review

  • Aplysia
  • neuropeptides
  • Neuropeptides
  • Locomotion
  • locomotion

• A protease for 'middle-down' proteomics

  Wu, C., Tran, J. C., Zamdborg, L., Durbin, K. R., Li, M., Ahlf, D. R., Early, B. P., Thomas, P. M., Sweedler, J. V. & Kelleher, N. L., Aug 1 2012, In: Nature Methods. 9, 8, p. 822-824 3 p.

  Research output: Contribution to journal › Article › peer-review

  • Proteomics
  • Peptide Hydrolases
  • Peptides
  • Proteolysis
  • Membranes

• A rotifer-derived paralytic compound prevents transmission of schistosomiasis to a mammalian host

  Gao, J., Yang, N., Lewis, F. A., Yau, P., Collins, J. J., Sweedler, J. V. & Newmark, P. A., Oct 17 2019, In: PLoS biology. 17, 10, e3000485.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • schistosomiasis
  • Schistosoma
  • Schistosomiasis
  • Rotifera
  • Cercaria

• A RubisCO-like protein links SAM metabolism with isoprenoid biosynthesis

  Erb, T. J., Evans, B. S., Cho, K., Warlick, B. P., Sriram, J., Wood, B. M. K., Imker, H. J., Sweedler, J. V., Tabita, F. R. & Gerlt, J. A., Nov 2012, In: Nature chemical biology. 8, 11, p. 926-932 7 p.

  Research output: Contribution to journal › Article › peer-review

  • ribulose-1,5 diphosphate
  • Oxygenases
  • link protein
  • Terpenes
  • Rhodospirillum rubrum

• Automated method for analysis of tryptophan and tyrosine metabolites using capillary electrophoresis with native fluorescence detection

  Dailey, C. A., Garnier, N., Rubakhin, S. S. & Sweedler, J. V., Mar 2013, In: Analytical and bioanalytical chemistry. 405, 8, p. 2451-2459 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Capillary electrophoresis
  • Metabolites
  • Capillary Electrophoresis
  • Fluorescence
  • Tryptophan

• A Versatile Strategy for Characterization and Imaging of Drip Flow Microbial Biofilms

  Li, B., Dunham, S. J. B., Ellis, J. F., Lange, J. D., Smith, J. R., Yang, N., King, T. L., Amaya, K. R., Arnett, C. M. & Sweedler, J. V., Jun 5 2018, In: Analytical Chemistry. 90, 11, p. 6725-6734 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Biofilms
  • Imaging techniques
  • Microbial corrosion
  • Mass spectrometry
  • Secondary ion mass spectrometry

• Biomolecular imaging with a C₆₀-SIMS/MALDI dual ion source hybrid mass spectrometer: Instrumentation, matrix enhancement, and single cell analysis

  Lanni, E. J., Dunham, S. J. B., Nemes, P., Rubakhin, S. S. & Sweedler, J. V., Nov 2014, In: Journal of the American Society for Mass Spectrometry. 25, 11, p. 1897-1907 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Ion sources
  • Secondary ion mass spectrometry
  • Mass spectrometers
  • Biomolecules
  • Single-Cell Analysis

• Characterization of bacillus subtilis colony biofilms via mass spectrometry and fluorescence imaging

  Si, T., Li, B., Zhang, K., Xu, Y., Zhao, H. & Sweedler, J. V., Jun 3 2016, In: Journal of Proteome Research. 15, 6, p. 1955-1962 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Fluorescence imaging
  • Bacilli
  • Biofilms
  • Mass spectrometry
  • Optical Imaging

• Characterization of GdFFD, a D-amino acid-containing neuropeptide that functions as an extrinsic modulator of the Aplysia feeding circuit

  Bai, L., Livnat, I., Romanova, E. V., Alexeeva, V., Yau, P. M., Vilim, F. S., Weiss, K. R., Jing, J. & Sweedler, J. V., Nov 15 2013, In: Journal of Biological Chemistry. 288, 46, p. 32837-32851 15 p.

  Research output: Contribution to journal › Article › peer-review

  • Aplysia
  • Neuropeptides
  • Modulators
  • Amino Acids
  • Peptides

• Circadian rhythm of redox state regulates excitability in suprachiasmatic nucleus neurons

  Wang, T. A., Yu, Y. V., Govindaiah, G., Ye, X., Artinian, L., Coleman, T. P., Sweedler, J. V., Cox, C. L. & Gillette, M. U., Aug 17 2012, In: Science. 337, 6096, p. 839-842 4 p.

  Research output: Contribution to journal › Article › peer-review

  • Suprachiasmatic Nucleus Neurons
  • Suprachiasmatic Nucleus
  • Circadian Rhythm
  • Circadian Clocks
  • Potassium Channels

• Classification of Large Cellular Populations and Discovery of Rare Cells Using Single Cell Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry

  Ong, T. H., Kissick, D. J., Jansson, E. T., Comi, T. J., Romanova, E. V., Rubakhin, S. S. & Sweedler, J. V., Jul 21 2015, In: Analytical Chemistry. 87, 14, p. 7036-7042 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Ionization
  • Mass spectrometry
  • Desorption
  • Lasers
  • Rats

• Combining small-volume metabolomic and transcriptomic approaches for assessing brain chemistry

  Knolhoff, A. M., Nautiyal, K. M., Nemes, P., Kalachikov, S., Morozova, I., Silver, R. & Sweedler, J. V., Mar 19 2013, In: Analytical Chemistry. 85, 6, p. 3136-3143 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Metabolomics
  • Metabolites
  • Capillary electrophoresis
  • Mass spectrometry
  • Brain

• Comparative peptidomics analysis of neural adaptations in rats repeatedly exposed to amphetamine

  Romanova, E. V., Lee, J. E., Kelleher, N. L., Sweedler, J. V. & Gulley, J. M., Nov 2012, In: Journal of Neurochemistry. 123, 2, p. 276-287 12 p.

  Research output: Contribution to journal › Article › peer-review

  • Rats
  • Amphetamine
  • Mass spectrometry
  • Peptides
  • Liquid chromatography

• Comparing label-free quantitative peptidomics approaches to characterize diurnal variation of peptides in the rat suprachiasmatic nucleus

  Southey, B. R., Lee, J. E., Zamdborg, L., Atkins, N., Mitchell, J. W., Li, M., Gillette, M. U., Kelleher, N. L. & Sweedler, J. V., Jan 7 2014, In: Analytical Chemistry. 86, 1, p. 443-452 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Rats
  • Labels
  • Peptides
  • Neuropeptides
  • Secretogranin II

• Conformational investigation of the structure-activity relationship of GdFFD and its analogues on an achatin-like neuropeptide receptor of: Aplysia californica involved in the feeding circuit

  Do, T. D., Checco, J. W., Tro, M., Shea, J. E., Bowers, M. T. & Sweedler, J. V., 2018, In: Physical Chemistry Chemical Physics. 20, 34, p. 22047-22057 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Neuropeptide Receptors
  • Conformations
  • amino acids
  • peptides
  • analogs

• Correction: Spatial organization of Pseudomonas aeruginosa biofilms probed by combined matrix-assisted laser desorption ionization mass spectrometry and confocal raman microscopy

  Masyuko, R. N., Lanni, E. J., Driscoll, C. M., Shrout, J. D., Sweedler, J. V. & Bohn, P. W., Oct 15 2014, In: Analyst. 139, 22, p. 6058-6060 3 p.

  Research output: Contribution to journal › Article › peer-review

  • Biofilms
  • Ionization
  • Mass spectrometry
  • Matrix-Assisted Laser Desorption-Ionization Mass Spectrometry
  • Desorption

• Correlated imaging with C₆₀-SIMS and confocal raman microscopy: Visualization of cell-scale molecular distributions in bacterial biofilms

  Lanni, E. J., Masyuko, R. N., Driscoll, C. M., Dunham, S. J. B., Shrout, J. D., Bohn, P. W. & Sweedler, J. V., Sep 30 2014, In: Analytical chemistry. 86, 21, p. 10885-10891 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Secondary ion mass spectrometry
  • Biofilms
  • Microscopic examination
  • Visualization
  • Imaging techniques

• D-Alanine in the islets of Langerhans of rat pancreas

  Ota, N., Rubakhin, S. S. & Sweedler, J. V., May 2 2014, In: Biochemical and Biophysical Research Communications. 447, 2, p. 328-333 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Rats
  • Alanine
  • Islets of Langerhans
  • Pancreas
  • Glucose

• Differential peptidomics assessment of strain and age differences in mice in response to acute cocaine administration

  Romanova, E. V., Rubakhin, S. S., Ossyra, J. R., Zombeck, J. A., Nosek, M. R., Sweedler, J. V. & Rhodes, J. S., Dec 1 2015, In: Journal of Neurochemistry. 135, 5, p. 1038-1048 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Cocaine
  • Peptides
  • Lateral Hypothalamic Area
  • Pituitary Gland
  • Pro-Opiomelanocortin

• Discovery of new enzymes and metabolic pathways by using structure and genome context

  Zhao, S., Kumar, R., Sakai, A., Vetting, M. W., Wood, B. M. K., Brown, S., Bonanno, J. B., Hillerich, B. S., Seidel, R. D., Babbitt, P. C., Almo, S. C., Sweedler, J. V., Gerlt, J. A., Cronan, J. E. & Jacobson, M. P., 2013, In: Nature. 502, 7473, p. 698-702 5 p.

  Research output: Contribution to journal › Article › peer-review

  • stachydrine
  • Metabolic Networks and Pathways
  • Substrate Specificity
  • Multigene Family
  • Genome

• Disruption of microglia histone acetylation and protein pathways in mice exhibiting inflammation-associated depression-like symptoms

  Rodriguez-Zas, S. L., Wu, C., Southey, B. R., O'Connor, J. C., Nixon, S. E., Garcia, R., Zavala, C., Lawson, M., McCusker, R. H., Romanova, E. V., Sweedler, J. V., Kelley, K. W. & Dantzer, R., Nov 2018, In: Psychoneuroendocrinology. 97, p. 47-58 12 p.

  Research output: Contribution to journal › Article › peer-review

  • Acetylation
  • Microglia
  • Histones
  • Depression
  • Inflammation

• Editorial and Review: 29th ASMS Sanibel Conference on Mass Spectrometry—Peptidomics: Bridging the Gap between Proteomics and Metabolomics by MS

  Li, L., Andrén, P. E. & Sweedler, J. V., May 1 2018, In: Journal of the American Society for Mass Spectrometry. 29, 5, p. 801-806 6 p.

  Research output: Contribution to journal › Article › peer-review

• Effects of exercise and dietary epigallocatechin gallate and β-alanine on skeletal muscle in aged mice

  Pence, B. D., Gibbons, T. E., Bhattacharya, T. K., Mach, H., Ossyra, J. M., Petr, G., Martin, S. A., Wang, L., Rubakhin, S. S., Sweedler, J. V., McCusker, R. H., Kelley, K. W., Rhodes, J. S., Johnson, R. W. & Woods, J. A., Oct 26 2015, In: Applied Physiology, Nutrition and Metabolism. 41, 2, p. 181-190 10 p.

  Research output: Contribution to journal › Article › peer-review

  • epigallocatechin gallate
  • Running
  • Alanine
  • Skeletal Muscle
  • Sirtuin 1

• Evaluation of database search programs for accurate detection of neuropeptides in tandem mass spectrometry experiments

  Akhtar, M. N., Southey, B. R., Andrén, P. E., Sweedler, J. V. & Rodriguez-Zas, S. L., Dec 7 2012, In: Journal of Proteome Research. 11, 12, p. 6044-6055 12 p.

  Research output: Contribution to journal › Article › peer-review

  • Mass spectrometry
  • Tandem Mass Spectrometry
  • Neuropeptides
  • Peptides
  • Databases

• Expired Epinephrine Maintains Chemical Concentration and Sterility

  Weir, W. B., Fred, L. Y., Pike, M., Rubakhin, S. S., Ludwig, T. J., Shar, A. M., Zhu, L., Frederick, A., Uzoaru, I., Wang, L. & Sweedler, J. V., Jul 4 2018, In: Prehospital Emergency Care. 22, 4, p. 414-418 5 p.

  Research output: Contribution to journal › Article › peer-review

  • Infertility
  • Epinephrine
  • Syringes
  • Emergency Medical Services
  • Magnetic Resonance Spectroscopy

• Exploring Exercise- and Context-Induced Peptide Changes in Mice by Quantitative Mass Spectrometry

  Dowd, S. E., Mustroph, M. L., Romanova, E. V., Southey, B. R., Pinardo, H., Rhodes, J. S. & Sweedler, J. V., Oct 24 2018, In: ACS Omega. 3, 10, p. 13817-13827 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Peptides
  • Mass spectrometry
  • Cocaine
  • Animals
  • Electrospray ionization

• Exploring the Sea Urchin Neuropeptide Landscape by Mass Spectrometry

  Monroe, E. B., Annangudi, S. P., Wadhams, A. A., Richmond, T. A., Yang, N., Southey, B. R., Romanova, E. V., Schoofs, L., Baggerman, G. & Sweedler, J. V., May 1 2018, In: Journal of the American Society for Mass Spectrometry. 29, 5, p. 923-934 12 p.

  Research output: Contribution to journal › Article › peer-review

  • Sea Urchins
  • Mass spectrometry
  • Neuropeptides
  • Mass Spectrometry
  • Echinodermata

• Fibrinogen α-chain-derived peptide is upregulated in hippocampus of rats exposed to acute morphine injection and spontaneous alternation testing

  Maki, A. E., Morris, K. A., Catherman, K., Chen, X., Hatcher, N. G., Gold, P. E. & Sweedler, J. V., Jun 2014, In: Pharmacology Research and Perspectives. 2, 3, e00037.

  Research output: Contribution to journal › Article › peer-review

  • Fibrinopeptide A
  • Fibrinogen
  • Morphine
  • Hippocampus
  • Peptides

• First survey and functional annotation of prohormone and convertase genes in the pig

  Porter, K. I., Southey, B. R., Sweedler, J. V. & Rodriguez-Zas, S. L., Nov 15 2012, In: BMC genomics. 13, 1, 582.

  Research output: Contribution to journal › Article › peer-review

  • Proprotein Convertases
  • Swine
  • Urocortins
  • Neuropeptides
  • Genes

• Functional Peptidomics: Stimulus- and Time-of-Day-Specific Peptide Release in the Mammalian Circadian Clock

  Atkins, N., Ren, S., Hatcher, N., Burgoon, P. W., Mitchell, J. W., Sweedler, J. V. & Gillette, M. U., Aug 15 2018, In: ACS Chemical Neuroscience. 9, 8, p. 2001-2008 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Circadian Clocks
  • Neuropeptides
  • Suprachiasmatic Nucleus
  • Clocks
  • Optics

• Gene network dysregulation in the trigeminal ganglia and nucleus accumbens of a model of chronic migraine-associated hyperalgesia

  Jeong, H., Moye, L. S., Southey, B. R., Hernandez, A. G., Dripps, I., Romanova, E. V., Rubakhin, S. S., Sweedler, J. V., Pradhan, A. A. & Rodriguez-Zas, S. L., Dec 18 2018, In: Frontiers in Systems Neuroscience. 12, 63.

  Research output: Contribution to journal › Article › peer-review

  • Trigeminal Nuclei
  • Trigeminal Ganglion
  • Nitroglycerin
  • Gene Regulatory Networks
  • Hyperalgesia

• Glial D-serine gates NMDA receptors at excitatory synapses in prefrontal cortex

  Fossat, P., Turpin, F. R., Sacchi, S., Dulong, J., Shi, T., Rivet, J. M., Sweedler, J. V., Pollegioni, L., Millan, M. J., Oliet, S. H. R. & Mothet, J. P., Mar 2012, In: Cerebral Cortex. 22, 3, p. 595-606 12 p.

  Research output: Contribution to journal › Article › peer-review

  • N-Methyl-D-Aspartate Receptors
  • Synapses
  • Prefrontal Cortex
  • Neuroglia
  • Glycine

• Identification of best indicators of peptide-spectrum match using a permutation resampling approach

  Akhtar, M. N., Southey, B. R., Andrén, P. E., Sweedler, J. V. & Rodriguez-Zas, S. L., Oct 30 2014, In: Journal of Bioinformatics and Computational Biology. 12, 5, 1440001.

  Research output: Contribution to journal › Article › peer-review

  • Peptides
  • Databases
  • Software

• Identification of prohormones and pituitary neuropeptides in the African cichlid, Astatotilapia burtoni

  Hu, C. K., Southey, B. R., Romanova, E. V., Maruska, K. P., Sweedler, J. V. & Fernald, R. D., Aug 19 2016, In: BMC genomics. 17, 1, 660.

  Research output: Contribution to journal › Article › peer-review

  • Cichlids
  • Neuropeptides
  • Fishes
  • Peptide Hormones
  • Genome

• Integration of untargeted metabolomics with transcriptomics reveals active metabolic pathways

  Cho, K., Evans, B. S., Wood, B. M. K., Kumar, R., Erb, T. J., Warlick, B. P., Gerlt, J. A. & Sweedler, J. V., Jun 1 2015, In: Metabolomics. 11, 3, p. 503-517 15 p.

  Research output: Contribution to journal › Article › peer-review

  • Metabolomics
  • Metabolic Networks and Pathways
  • Salvaging
  • Methionine
  • Metabolites

• Interrogation of spatial metabolome of Ginkgo biloba with high-resolution matrix-assisted laser desorption/ionization and laser desorption/ionization mass spectrometry imaging

  Li, B., Neumann, E. K., Ge, J., Gao, W., Yang, H., Li, P. & Sweedler, J. V., Nov 2018, In: Plant Cell and Environment. 41, 11, p. 2693-2703 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Ginkgo
  • Ginkgo biloba
  • metabolome
  • Metabolome
  • ionization

• Label-free quantitation of peptide release from neurons in a microfluidic device with mass spectrometry imaging

  Zhong, M., Lee, C. Y., Croushore, C. A. & Sweedler, J. V., May 8 2012, In: Lab on a chip. 12, 11, p. 2037-2045 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Lab-On-A-Chip Devices
  • Peptides
  • Mass spectrometry
  • Microfluidics
  • Neurons

• Laminar stream of detergents for subcellular neurite damage in a microfluidic device: A simple tool for the study of neuroregeneration

  Lee, C. Y., Romanova, E. V. & Sweedler, J. V., Jun 2013, In: Journal of Neural Engineering. 10, 3, 036020.

  Research output: Contribution to journal › Article › peer-review

  • Lab-On-A-Chip Devices
  • Detergents
  • Neurites
  • Microfluidics
  • Neurons

• Lipid Analysis of 30 000 Individual Rodent Cerebellar Cells Using High-Resolution Mass Spectrometry

  Neumann, E. K., Ellis, J. F., Triplett, A. E., Rubakhin, S. S. & Sweedler, J. V., Jan 1 2019, In: Analytical Chemistry.

  Research output: Contribution to journal › Article › peer-review

  • Mass spectrometry
  • Lipids
  • Cyclotron resonance
  • Ionization
  • Rats

• Lipid Heterogeneity between Astrocytes and Neurons Revealed by Single-Cell MALDI-MS Combined with Immunocytochemical Classification

  Neumann, E. K., Comi, T. J., Rubakhin, S. S. & Sweedler, J. V., Apr 23 2019, In: Angewandte Chemie - International Edition. 58, 18, p. 5910-5914 5 p.

  Research output: Contribution to journal › Article › peer-review

  • Astrocytes
  • Lipids
  • Ionization
  • Mass spectrometry
  • Desorption