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Article
13C-lutein is differentially distributed in tissues of an adult female rhesus macaque following a single oral administration: a pilot study
Jeon, S., Li, Q., Rubakhin, S. S., Sweedler, J. V., Smith, J. W., Neuringer, M., Kuchan, M. & Erdman, J. W., Jan 2019, In: Nutrition Research. 61, p. 102-108 7 p.Research output: Contribution to journal › Article › peer-review
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3D-Printed pHEMA Materials for Topographical and Biochemical Modulation of Dorsal Root Ganglion Cell Response
Badea, A., McCracken, J. M., Tillmaand, E. G., Kandel, M. E., Oraham, A. W., Mevis, M. B., Rubakhin, S. S., Popescu, G., Sweedler, J. V. & Nuzzo, R. G., Sep 13 2017, In: ACS Applied Materials and Interfaces. 9, 36, p. 30318-30328 11 p.Research output: Contribution to journal › Article › peer-review
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Accurate assignment of significance to neuropeptide identifications using monte carlo K-permuted decoy databases
Akhtar, M. N., Southey, B. R., Andrén, P. E., Sweedler, J. V. & Rodriguez-Zas, S. L., Oct 17 2014, In: PloS one. 9, 10, e111112.Research output: Contribution to journal › Article › peer-review
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A hybrid, de novo based, genome-wide database search approach applied to the sea urchin neuropeptidome
Menschaert, G., Vandekerckhove, T. T. M., Baggerman, G., Landuyt, B., Sweedler, J. V., Schoofs, L., Luyten, W. & Van Criekinge, W., Feb 5 2010, In: Journal of Proteome Research. 9, 2, p. 990-996 7 p.Research output: Contribution to journal › Article › peer-review
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Analysis of endogenous nucleotides by single cell capillary electrophoresis-mass spectrometry
Liu, J. X., Aerts, J. T., Rubakhin, S. S., Zhang, X. X. & Sweedler, J. V., Oct 15 2014, In: Analyst. 139, 22, p. 5835-5842 8 p.Research output: Contribution to journal › Article › peer-review
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Aplysia allatotropin-related peptide and its newly identified D-amino acid-containing epimer both activate a receptor and a neuronal target
Checco, J. W., Zhang, G., Yuan, W. D., Le, Z. W., Jing, J. & Sweedler, J. V., Oct 26 2019, In: Journal of Biological Chemistry. 293, 43, p. 16862-16873 12 p.Research output: Contribution to journal › Article › peer-review
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A rotifer-derived paralytic compound prevents transmission of schistosomiasis to a mammalian host
Gao, J., Yang, N., Lewis, F. A., Yau, P., Collins, J. J., Sweedler, J. V. & Newmark, P. A., Oct 17 2019, In: PLoS biology. 17, 10, e3000485.Research output: Contribution to journal › Article › peer-review
Open Access -
A unique combination of micronutrients rejuvenates cognitive performance in aged mice
Perez, S. D., Du, K., Rendeiro, C., Wang, L., Wu, Q., Rubakhin, S. S., Vazhappilly, R., Baxter, J. H., Sweedler, J. V. & Rhodes, J. S., Mar 1 2017, In: Behavioural Brain Research. 320, p. 97-112 16 p.Research output: Contribution to journal › Article › peer-review
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Automated method for analysis of tryptophan and tyrosine metabolites using capillary electrophoresis with native fluorescence detection
Dailey, C. A., Garnier, N., Rubakhin, S. S. & Sweedler, J. V., Mar 2013, In: Analytical and bioanalytical chemistry. 405, 8, p. 2451-2459 9 p.Research output: Contribution to journal › Article › peer-review
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Base-induced delignification of miscanthus x giganteus studied by three-dimensional confocal raman imaging
Chu, L. Q., Masyuko, R., Sweedler, J. V. & Bohn, P. W., Jul 1 2010, In: Bioresource Technology. 101, 13, p. 4919-4925 7 p.Research output: Contribution to journal › Article › peer-review
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Biomolecular imaging with a C60-SIMS/MALDI dual ion source hybrid mass spectrometer: Instrumentation, matrix enhancement, and single cell analysis
Lanni, E. J., Dunham, S. J. B., Nemes, P., Rubakhin, S. S. & Sweedler, J. V., Nov 2014, In: Journal of the American Society for Mass Spectrometry. 25, 11, p. 1897-1907 11 p.Research output: Contribution to journal › Article › peer-review
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Carrot solution culture bioproduction of uniformly labeled 13C-lutein and in vivo dosing in non-human primates
Smith, J. W., Rogers, R. B., Jeon, S., Rubakhin, S. S., Wang, L., Sweedler, J. V., Neuringer, M., Kuchan, M. J. & Erdman, J. W., Feb 1 2017, In: Experimental Biology and Medicine. 242, 3, p. 305-315 11 p.Research output: Contribution to journal › Article › peer-review
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Characterization of GdFFD, a D-amino acid-containing neuropeptide that functions as an extrinsic modulator of the Aplysia feeding circuit
Bai, L., Livnat, I., Romanova, E. V., Alexeeva, V., Yau, P. M., Vilim, F. S., Weiss, K. R., Jing, J. & Sweedler, J. V., Nov 15 2013, In: Journal of Biological Chemistry. 288, 46, p. 32837-32851 15 p.Research output: Contribution to journal › Article › peer-review
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Chiral Measurement of Aspartate and Glutamate in Single Neurons by Large-Volume Sample Stacking Capillary Electrophoresis
Patel, A. V., Kawai, T., Wang, L., Rubakhin, S. S. & Sweedler, J. V., Nov 21 2017, In: Analytical Chemistry. 89, 22, p. 12375-12382 8 p.Research output: Contribution to journal › Article › peer-review
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Circadian integration of glutamatergic signals by little SAAS in novel suprachiasmatic circuits
Atkins, N., Mitchell, J. W., Romanova, E. V., Morgan, D. J., Cominski, T. P., Ecker, J. L., Pintar, J. E., Sweedler, J. V. & Gillette, M. U., 2010, In: PloS one. 5, 9, p. 1-13 13 p., e12612.Research output: Contribution to journal › Article › peer-review
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Classification of Large Cellular Populations and Discovery of Rare Cells Using Single Cell Matrix-Assisted Laser Desorption/Ionization Time-of-Flight Mass Spectrometry
Ong, T. H., Kissick, D. J., Jansson, E. T., Comi, T. J., Romanova, E. V., Rubakhin, S. S. & Sweedler, J. V., Jul 21 2015, In: Analytical Chemistry. 87, 14, p. 7036-7042 7 p.Research output: Contribution to journal › Article › peer-review
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Combining small-volume metabolomic and transcriptomic approaches for assessing brain chemistry
Knolhoff, A. M., Nautiyal, K. M., Nemes, P., Kalachikov, S., Morozova, I., Silver, R. & Sweedler, J. V., Mar 19 2013, In: Analytical Chemistry. 85, 6, p. 3136-3143 8 p.Research output: Contribution to journal › Article › peer-review
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Comparing label-free quantitative peptidomics approaches to characterize diurnal variation of peptides in the rat suprachiasmatic nucleus
Southey, B. R., Lee, J. E., Zamdborg, L., Atkins, N., Mitchell, J. W., Li, M., Gillette, M. U., Kelleher, N. L. & Sweedler, J. V., Jan 7 2014, In: Analytical Chemistry. 86, 1, p. 443-452 10 p.Research output: Contribution to journal › Article › peer-review
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Comparison of sample pre-treatments for laser desorption ionization and secondary ion mass spectrometry imaging of Miscanthus × giganteus
Li, Z., Bohn, P. W. & Sweedler, J. V., Jul 2010, In: Bioresource Technology. 101, 14, p. 5578-5585 8 p.Research output: Contribution to journal › Article › peer-review
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Composite modulatory feedforward loop contributes to the establishment of a network state
Wu, J. S., Vilim, F. S., Hatcher, N. G., Due, M. R., Sweedler, J. V., Weiss, K. R. & Jing, J., Apr 2010, In: Journal of neurophysiology. 103, 4, p. 2174-2184 11 p.Research output: Contribution to journal › Article › peer-review
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Correction: Spatial organization of Pseudomonas aeruginosa biofilms probed by combined matrix-assisted laser desorption ionization mass spectrometry and confocal raman microscopy
Masyuko, R. N., Lanni, E. J., Driscoll, C. M., Shrout, J. D., Sweedler, J. V. & Bohn, P. W., Oct 15 2014, In: Analyst. 139, 22, p. 6058-6060 3 p.Research output: Contribution to journal › Article › peer-review
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Correlated imaging with C60-SIMS and confocal raman microscopy: Visualization of cell-scale molecular distributions in bacterial biofilms
Lanni, E. J., Masyuko, R. N., Driscoll, C. M., Dunham, S. J. B., Shrout, J. D., Bohn, P. W. & Sweedler, J. V., Sep 30 2014, In: Analytical Chemistry. 86, 21, p. 10885-10891 7 p.Research output: Contribution to journal › Article › peer-review
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D-Alanine in the islets of Langerhans of rat pancreas
Ota, N., Rubakhin, S. S. & Sweedler, J. V., May 2 2014, In: Biochemical and Biophysical Research Communications. 447, 2, p. 328-333 6 p.Research output: Contribution to journal › Article › peer-review
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Deterministic Integration of Biological and Soft Materials onto 3D Microscale Cellular Frameworks
McCracken, J. M., Xu, S., Badea, A., Jang, K. I., Yan, Z., Wetzel, D. J., Nan, K., Lin, Q., Han, M., Anderson, M. A., Lee, J. W., Wei, Z., Pharr, M., Wang, R., Su, J., Rubakhin, S. S., Sweedler, J. V., Rogers, J. A. & Nuzzo, R. G., Sep 2017, In: Advanced Biosystems. 1, 9, 1700068.Research output: Contribution to journal › Article › peer-review
Open Access -
Differential peptidomics assessment of strain and age differences in mice in response to acute cocaine administration
Romanova, E. V., Rubakhin, S. S., Ossyra, J. R., Zombeck, J. A., Nosek, M. R., Sweedler, J. V. & Rhodes, J. S., Dec 1 2015, In: Journal of Neurochemistry. 135, 5, p. 1038-1048 11 p.Research output: Contribution to journal › Article › peer-review
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Direct cellular peptidomics of supraoptic magnocellular and hippocampal neurons in low-density cocultures
Millet, L. J., Bora, A., Sweedler, J. V. & Gillette, M. U., Jan 20 2010, In: ACS Chemical Neuroscience. 1, 1, p. 36-48 13 p.Research output: Contribution to journal › Article › peer-review
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Discovery of leucokinin-like neuropeptides that modulate a specific parameter of feeding motor programs in the molluscan model, Aplysia
Zhang, G., Vilim, F. S., Liu, D. D., Romanova, E. V., Yu, K., Yuan, W. D., Xiao, H., Hummon, A. B., Chen, T. T., Alexeeva, V., Yin, S. Y., Chen, S. A., Cropper, E. C., Sweedler, J. V., Weiss, K. R. & Jing, J., Nov 17 2017, In: Journal of Biological Chemistry. 292, 46, p. 18775-18789 15 p.Research output: Contribution to journal › Article › peer-review
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Discovery of new enzymes and metabolic pathways by using structure and genome context
Zhao, S., Kumar, R., Sakai, A., Vetting, M. W., Wood, B. M. K., Brown, S., Bonanno, J. B., Hillerich, B. S., Seidel, R. D., Babbitt, P. C., Almo, S. C., Sweedler, J. V., Gerlt, J. A., Cronan, J. E. & Jacobson, M. P., 2013, In: Nature. 502, 7473, p. 698-702 5 p.Research output: Contribution to journal › Article › peer-review
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Distinct mechanisms produce functionally complementary actions of neuropeptides that are structurally related but derived from different precursors
Vilim, F. S., Sasaki, K., Rybak, J., Alexeeva, V., Cropper, E. C., Jing, J., Orekhova, I. V., Brezina, V., Price, D., Romanova, E. V., Rubakhin, S. S., Hatcher, N., Sweedler, J. V. & Weiss, K. R., Jan 6 2010, In: Journal of Neuroscience. 30, 1, p. 131-147 17 p.Research output: Contribution to journal › Article › peer-review
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Dopamine-modified TiO2 monolith-assisted LDI MS imaging for simultaneous localization of small metabolites and lipids in mouse brain tissue with enhanced detection selectivity and sensitivity
Wu, Q., Chu, J. L., Rubakhin, S. S., Gillette, M. U. & Sweedler, J. V., 2017, In: Chemical Science. 8, 5, p. 3926-3938 13 p.Research output: Contribution to journal › Article › peer-review
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Effects of exercise and dietary epigallocatechin gallate and β-alanine on skeletal muscle in aged mice
Pence, B. D., Gibbons, T. E., Bhattacharya, T. K., Mach, H., Ossyra, J. M., Petr, G., Martin, S. A., Wang, L., Rubakhin, S. S., Sweedler, J. V., McCusker, R. H., Kelley, K. W., Rhodes, J. S., Johnson, R. W. & Woods, J. A., Oct 26 2015, In: Applied Physiology, Nutrition and Metabolism. 41, 2, p. 181-190 10 p.Research output: Contribution to journal › Article › peer-review
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Electrokinetic control of fluid transport in gold-coated nanocapillary array membranes in hybrid nanofluidic-microfluidic devices
Piruska, A., Branagan, S. P., Minnis, A. B., Wang, Z., Cropek, D. M., Sweedler, J. V. & Bohn, P. W., 2010, In: Lab on a chip. 10, 10, p. 1237-1244 8 p.Research output: Contribution to journal › Article › peer-review
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Endogenous peptide discovery of the rat circadian clock: A focused study of the suprachiasmatic nucleus by ultrahigh performance tandem mass spectrometry
Lee, J. E., Atkins, N., Hatcher, N. G., Zamdborg, L., Gillette, M. U., Sweedler, J. V. & Kelleher, N. L., Feb 2010, In: Molecular and Cellular Proteomics. 9, 2, p. 285-297 13 p.Research output: Contribution to journal › Article › peer-review
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Feedforward compensation mediated by the central and peripheral actions of a single neuropeptide discovered using representational difference analysis
Jing, J., Sweedler, J. V., Cropper, E. C., Alexeeva, V., Park, J. H., Romanova, E. V., Xie, F., Dembrow, N. C., Ludwar, B. C., Weiss, K. R. & Vilim, F. S., Dec 8 2010, In: Journal of Neuroscience. 30, 49, p. 16545-16558 14 p.Research output: Contribution to journal › Article › peer-review
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Fibrinogen α-chain-derived peptide is upregulated in hippocampus of rats exposed to acute morphine injection and spontaneous alternation testing
Maki, A. E., Morris, K. A., Catherman, K., Chen, X., Hatcher, N. G., Gold, P. E. & Sweedler, J. V., Jun 2014, In: Pharmacology Research and Perspectives. 2, 3, e00037.Research output: Contribution to journal › Article › peer-review
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Genome-wide analyses reveal a role for peptide hormones in planarian germline development
Collins, J. J., Hou, X., Romanova, E. V., Lambrus, B. G., Miller, C. M., Saberi, A., Sweedler, J. V. & Newmark, P. A., Oct 2010, In: PLoS biology. 8, 10, e1000509.Research output: Contribution to journal › Article › peer-review
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Genome-wide census and expression profiling of chicken neuropeptide and prohormone convertase genes
Delfino, K. R., Southey, B. R., Sweedler, J. V. & Rodriguez-Zas, S. L., Feb 2010, In: Neuropeptides. 44, 1, p. 31-44 14 p.Research output: Contribution to journal › Article › peer-review
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Identification of best indicators of peptide-spectrum match using a permutation resampling approach
Akhtar, M. N., Southey, B. R., Andrén, P. E., Sweedler, J. V. & Rodriguez-Zas, S. L., Oct 30 2014, In: Journal of Bioinformatics and Computational Biology. 12, 5, 1440001.Research output: Contribution to journal › Article › peer-review
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Improved identification and quantitation of mature endogenous peptides in the rodent hypothalamus using a rapid conductive sample heating system
Yang, N., Anapindi, K. D. B., Romanova, E. V., Rubakhin, S. S. & Sweedler, J. V., Dec 7 2017, In: Analyst. 142, 23, p. 4476-4485 10 p.Research output: Contribution to journal › Article › peer-review
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Integration of untargeted metabolomics with transcriptomics reveals active metabolic pathways
Cho, K., Evans, B. S., Wood, B. M. K., Kumar, R., Erb, T. J., Warlick, B. P., Gerlt, J. A. & Sweedler, J. V., Jun 1 2015, In: Metabolomics. 11, 3, p. 503-517 15 p.Research output: Contribution to journal › Article › peer-review
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Laminar stream of detergents for subcellular neurite damage in a microfluidic device: A simple tool for the study of neuroregeneration
Lee, C. Y., Romanova, E. V. & Sweedler, J. V., Jun 2013, In: Journal of Neural Engineering. 10, 3, 036020.Research output: Contribution to journal › Article › peer-review
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Lipid Analysis of 30 000 Individual Rodent Cerebellar Cells Using High-Resolution Mass Spectrometry
Neumann, E. K., Ellis, J. F., Triplett, A. E., Rubakhin, S. S. & Sweedler, J. V., Jan 1 2019, In: Analytical Chemistry.Research output: Contribution to journal › Article › peer-review
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Lipid Heterogeneity between Astrocytes and Neurons Revealed by Single-Cell MALDI-MS Combined with Immunocytochemical Classification
Neumann, E. K., Comi, T. J., Rubakhin, S. S. & Sweedler, J. V., Apr 23 2019, In: Angewandte Chemie - International Edition. 58, 18, p. 5910-5914 5 p.Research output: Contribution to journal › Article › peer-review
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MALDI-guided SIMS: Multiscale imaging of metabolites in bacterial biofilms
Lanni, E. J., Masyuko, R. N., Driscoll, C. M., Aerts, J. T., Shrout, J. D., Bohn, P. W. & Sweedler, J. V., Sep 1 2014, In: Analytical Chemistry. 86, 18, p. 9139-9145 7 p.Research output: Contribution to journal › Article › peer-review
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MALDI MS Guided Liquid Microjunction Extraction for Capillary Electrophoresis-Electrospray Ionization MS Analysis of Single Pancreatic Islet Cells
Comi, T. J., Makurath, M. A., Philip, M. C., Rubakhin, S. S. & Sweedler, J. V., Jul 18 2017, In: Analytical Chemistry. 89, 14, p. 7765-7772 8 p.Research output: Contribution to journal › Article › peer-review
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Mass spectrometry imaging and GC-MS profiling of the mammalian peripheral sensory-motor circuit
Rubakhin, S. S., Ulanov, A. & Sweedler, J. V., Jun 1 2015, In: Journal of the American Society for Mass Spectrometry. 26, 6, p. 958-966 9 p.Research output: Contribution to journal › Article › peer-review
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Mass spectrometry imaging of complex microbial communities
Dunham, S. J. B., Ellis, J. F., Li, B. & Sweedler, J. V., Jan 17 2017, In: Accounts of chemical research. 50, 1, p. 96-104 9 p.Research output: Contribution to journal › Article › peer-review
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Mass spectrometry screening reveals peptides modulated differentially in the medial prefrontal cortex of rats with disparate initial sensitivity to cocaine
Romanova, E. V., Lee, J. E., Kelleher, N. L., Sweedler, J. V. & Gulley, J. M., Sep 2010, In: AAPS Journal. 12, 3, p. 443-454 12 p.Research output: Contribution to journal › Article › peer-review
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Microbeam-coupled capillary electrophoresis
Garty, G., Ehsan, M. U., Buonanno, M., Yang, Z., Sweedler, J. V. & Brenner, D. J., Sep 1 2015, In: Radiation Protection Dosimetry. 166, 1-4, p. 188-191 4 p., ncv148.Research output: Contribution to journal › Article › peer-review
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microMS: A Python Platform for Image-Guided Mass Spectrometry Profiling
Comi, T. J., Neumann, E. K., Do, T. D. & Sweedler, J. V., Sep 1 2017, In: Journal of the American Society for Mass Spectrometry. 28, 9, p. 1919-1928 10 p.Research output: Contribution to journal › Article › peer-review