Find Research outputs

Search results

• Label-free electrical detection of pyrophosphate generated from DNA polymerase reactions on field-effect devices

  Credo, G. M., Su, X., Wu, K., Elibol, O. H., Liu, D. J., Reddy, B., Tsai, T. W., Dorvel, B. R., Daniels, J. S., Bashir, R. & Varma, M., Mar 21 2012, In: Analyst. 137, 6, p. 1351-1362 12 p.

  Research output: Contribution to journal › Article › peer-review

  • diphosphoric acid
  • DNA
  • Labels
  • Chelating Agents
  • sensor

• Investigating the Life Expectancy and Proteolytic Degradation of Engineered Skeletal Muscle Biological Machines

  Cvetkovic, C., Ferrall-Fairbanks, M. C., Ko, E., Grant, L., Kong, H., Platt, M. O. & Bashir, R., Dec 1 2017, In: Scientific reports. 7, 1, 3775.

  Research output: Contribution to journal › Article › peer-review

  • Life Expectancy
  • Peptide Hydrolases
  • Skeletal Muscle
  • Tissue Engineering
  • Matrix Metalloproteinases

• Inverse-extraordianry optoconductance in Ti/Au/GaAs hybrid structures

  Newaz, A. K. M., Chang, W. J., Wallace, K. D., Wickline, S. A., Bashir, R., Gilbertson, A. M., Cohen, L. F., Edge, L. C. & Solin, S. A., Dec 1 2011, Physics of Semiconductors - 30th International Conference on the Physics of Semiconductors, ICPS-30. p. 973-974 2 p. (AIP Conference Proceedings; vol. 1399).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • hybrid structures
  • metals
  • luminous intensity
  • photons

• Integrated lab on chip for detection of cells and micro-organisms

  Salm, E., Duarte, C. & Bashir, R., Dec 1 2012, 2012 IEEE Photonics Conference, IPC 2012. p. 145-146 2 p. 6358531. (2012 IEEE Photonics Conference, IPC 2012).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Transistors
  • Field effect transistors
  • Lab-on-a-chip
  • Hybrid sensors
  • Nucleic acids

• Integrated 'lab-on-a-transistor': With droplets-in-air for parallel nanoliter reactions

  Salm, E., Duarte, C., Jokilaakso, N. & Bashir, R., Jan 1 2012, Proceedings of the 16th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2012. Chemical and Biological Microsystems Society, p. 1945-1947 3 p. (Proceedings of the 16th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2012).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Transistors
  • Air
  • Heating
  • Thermal cycling
  • Sensors

• Integrated cantilever-based biosensors for the detection of chemical and biological entities

  Corbin, E. A., YekrangSafakar, A., Adeniba, O., Gupta, A., Park, K. & Bashir, R., Jan 1 2017, Nanotechnology in Biology and Medicine: Methods, Devices, and Applications, Second Edition. CRC Press, p. 469-529 61 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Biosensing Techniques
  • Biosensors
  • Sensors
  • Vacuum
  • Air

• In situ self-folding assembly of a multi-walled hydrogel tube for uniaxial sustained molecular release

  Baek, K., Jeong, J. H., Shkumatov, A., Bashir, R. & Kong, H., Oct 18 2013, In: Advanced Materials. 25, 39, p. 5568-5573 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Hydrogels
  • Polyethylene Glycol Dimethacrylate Hydrogel
  • Gels
  • poly(ethylene glycol)diacrylate
  • Intercellular Signaling Peptides and Proteins

• Independent control stiffness and permeability of a cell-encapsulating hydrogel; integration of bio-inspired material chemistry and microfabrication

  Jeong, J. H., Chan, V., Cha, C., Zorlutuna, P., Bashir, R. & Kong, H., Jan 1 2011, Materials Engineering and Sciences Division - Core Programming Topic at the 2011 AIChE Annual Meeting. AIChE, 1 p. (Materials Engineering and Sciences Division - Core Programming Topic at the 2011 AIChE Annual Meeting; vol. 2).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Improved graphene growth and fluorination on Cu with clean transfer to surfaces

  Wood, J. D., Schmucker, S. W., Haasch, R. T., Doidge, G. P., Nienhaus, L., Damhorst, G. L., Lyons, A. S., Gruebele, M., Bashir, R., Pop, E. & Lyding, J. W., Nov 22 2012, 2012 12th IEEE International Conference on Nanotechnology, NANO 2012. 6322101. (Proceedings of the IEEE Conference on Nanotechnology).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Fluorination
  • fluorination
  • Graphite
  • Graphene
  • graphene

• Hydrodynamic loading and viscous damping of patterned perforations on microfabricated resonant structures

  Park, K., Shim, J., Solovyeva, V., Corbin, E., Banerjee, S. & Bashir, R., Apr 9 2012, In: Applied Physics Letters. 100, 15, 154107.

  Research output: Contribution to journal › Article › peer-review

  • viscous damping
  • perforation
  • hydrodynamics
  • penetration
  • perforating

• How far cardiac cells can see each other mechanically

  Tang, X., Bajaj, P., Bashir, R. & Saif, T. A., Jul 7 2011, In: Soft Matter. 7, 13, p. 6151-6158 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Substrates
  • cells
  • Stiffness
  • Continuum mechanics
  • Tissue

• HIV-1 IIIB capture from whole blood on magnetic microparticles

  Damhorst, G. L., Kooiman, J. M. & Bashir, R., Oct 13 2016, 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2016. Institute of Electrical and Electronics Engineers Inc., p. 5785-5788 4 p. 7592042. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS; vol. 2016-October).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Antibodies
  • Blood
  • Proteins
  • HIV-1
  • Drug therapy

• High-Resolution Projection Microstereolithography for Patterning of Neovasculature

  Raman, R., Bhaduri, B., Mir, M., Shkumatov, A., Lee, M. K., Popescu, G., Kong, H. & Bashir, R., Mar 9 2016, In: Advanced Healthcare Materials. 5, 5, p. 610-619 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Stereolithography
  • Tissue engineering
  • Assays
  • Immunosorbents
  • Tissue

• High-k dielectric Al₂O₃ nanowire and nanoplate field effect sensors for improved pH sensing

  Reddy, B., Dorvel, B. R., Go, J., Nair, P. R., Elibol, O. H., Credo, G. M., Daniels, J. S., Chow, E. K. C., Su, X., Varma, M., Alam, M. A. & Bashir, R., Apr 2011, In: Biomedical microdevices. 13, 2, p. 335-344 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Nanowires
  • High-k dielectric
  • Aluminum oxide
  • Gate dielectrics
  • Equipment and Supplies

• Hands-free smartphone-based diagnostics for simultaneous detection of Zika, Chikungunya, and Dengue at point-of-care

  Ganguli, A., Ornob, A., Yu, H., Damhorst, G. L., Chen, W., Sun, F., Bhuiya, A., Cunningham, B. T. & Bashir, R., Dec 1 2017, In: Biomedical microdevices. 19, 4, 73.

  Research output: Contribution to journal › Article › peer-review

  • Smartphone
  • Dengue
  • Point-of-Care Systems
  • Smartphones
  • Blood

• Graphene nanopores for nucleic acid analysis

  Shim, J., Solovyeva, V., Estrada, D., Banerjee, S., Rivera, J., Pop, E. & Bashir, R., 2012, 2012 12th IEEE International Conference on Nanotechnology, NANO 2012. 6322237

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Nanopores
  • Nucleic acids
  • Graphite
  • nucleic acids
  • Graphene

• Fluidic measurement of electric field sensitivity of Ti-GaAs Schottky junction gated field effect biosensors

  Chang, W. J., Suk, H. J., Newaz, A. K. M., Wallace, K. D., Wickline, S. A., Solin, S. A. & Bashir, R., Oct 2010, In: Biomedical microdevices. 12, 5, p. 849-854 6 p.

  Research output: Contribution to journal › Article › peer-review

  • gallium arsenide
  • Biosensing Techniques
  • Biosensors
  • Fluidics
  • Semiconductors

• Fabrication of silicon nanoplate and nanowire biosensor arrays with high specificity and sub-picomolar limits of detection

  Dorvel, B., Reddy, B., Bergstrom, D., Alam, M. A., Clare, S. & Bashir, R., Dec 1 2010, 14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010. p. 1871-1873 3 p. (14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010; vol. 3).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Nanowires
  • Biosensors
  • Field effect transistors
  • Ions
  • Silicon

• Examining cellular interactions in 3-dimensional microenvironments

  Zorlutuna, P., Jeong, J. H., Kong, H. & Bashir, R., 2011, 24th European Conference on Biomaterials - Annual Conference of the European Society for Biomaterials, ESB 2011.

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Evidence of differential mass change rates between human breast cancer cell lines in culture

  Corbin, E. A., Adeniba, O. O., Cangellaris, O. V., King, W. P. & Bashir, R., Mar 1 2017, In: Biomedical microdevices. 19, 1, 10.

  Research output: Contribution to journal › Article › peer-review

  • Cell culture
  • Cells
  • Breast Neoplasms
  • Cell Line
  • Growth

• Enabling microscale and nanoscale approaches for bioengineered cardiac tissue

  Chan, V., Raman, R., Cvetkovic, C. & Bashir, R., Mar 26 2013, In: ACS Nano. 7, 3, p. 1830-1837 8 p.

  Research output: Contribution to journal › Article › peer-review

  • microbalances
  • Tissue
  • Carbon Nanotubes
  • Methacrylates
  • gelatins

• Electron beam induced local crystallization of HfO₂ nanopores for biosensing applications

  Shim, J., Rivera, J. A. & Bashir, R., Nov 21 2013, In: Nanoscale. 5, 22, p. 10887-10893 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Nanopores
  • Crystallization
  • Electron beams
  • Graphite
  • Membranes

• Electrochemistry at the edge of a single graphene layer in a nanopore

  Banerjee, S., Shim, J., Rivera, J., Jin, X., Estrada, D., Solovyeva, V., You, X., Pak, J., Pop, E., Aluru, N. & Bashir, R., Jan 22 2013, In: ACS Nano. 7, 1, p. 834-843 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Nanopores
  • Electrochemistry
  • Graphite
  • electrochemistry
  • Graphene

• Electrical flow metering of blood for point-of-care diagnostics

  Watkins, N., Hassan, U., Rodriguez, W. & Bashir, R., Dec 14 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2012. p. 3255-3257 3 p. 6346659. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Point-of-Care Systems
  • Blood
  • Microfluidics
  • Microelectrodes
  • Leukocyte Count

• Electrical detection of dsDNA and polymerase chain reaction amplification

  Salm, E., Liu, Y. S., Marchwiany, D., Morisette, D., He, Y., Bhunia, A. K. & Bashir, R., Dec 2011, In: Biomedical microdevices. 13, 6, p. 973-982 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Polymerase chain reaction
  • DNA
  • Amplification
  • Pathogens
  • Deionized water

• Electrical Chips for Biological Point-of-Care Detection

  Reddy, B., Salm, E. & Bashir, R., Jul 11 2016, In: Annual Review of Biomedical Engineering. 18, p. 329-355 27 p.

  Research output: Contribution to journal › Review article › peer-review

  • Biochips
  • Point-of-Care Systems
  • Lab-on-a-chip
  • Multiplexing
  • Health care

• Effect of biointerfacing linker chemistries on the sensitivity of silicon nanowires for protein detection

  Dorvel, B., Reddy, B. & Bashir, R., Oct 15 2013, In: Analytical Chemistry. 85, 20, p. 9493-9500 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Nanowires
  • Silicon
  • Oxides
  • Proteins
  • Polyethylene glycols

• Dynamic mechanical measurement of the viscoelasticity of single adherent cells

  Corbin, E. A., Adeniba, O. O., Ewoldt, R. H. & Bashir, R., Feb 29 2016, In: Applied Physics Letters. 108, 9, 093701.

  Research output: Contribution to journal › Article › peer-review

  • mechanical measurement
  • viscoelasticity
  • cells
  • sensors
  • microelectromechanical systems

• Droplet-based biosensing for lab-on-a-chip, open microfluidics platforms

  Dak, P., Ebrahimi, A., Swaminathan, V., Duarte-Guevara, C., Bashir, R. & Alam, M. A., 2016, In: Biosensors. 6, 2, 14.

  Research output: Contribution to journal › Review article › peer-review

  • Lab-on-a-chip
  • Microfluidics
  • Biosensing Techniques
  • Biosensors
  • Costs and Cost Analysis

• DNA sensing using nanocrystalline surface-enhanced Al₂O ₃ nanopore sensors

  Venkatesan, B. M., Shah, A. B., Zuo, J. M. & Bashir, R., Apr 23 2010, In: Advanced Functional Materials. 20, 8, p. 1266-1275 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Nanopores
  • DNA
  • deoxyribonucleic acid
  • sensors
  • Surface charge

• Directed cell growth and alignment on protein-patterned 3D hydrogels with stereolithography: In this tissue engineering application, PEG-based hydrogels with different fibronectin patterns were fabricated and the influence of the protein patterns on shape and direction of seeded cells was studied

  Chan, V., Collens, M. B., Jeong, J. H., Park, K., Kong, H. & Bashir, R., Sep 1 2012, In: Virtual and Physical Prototyping. 7, 3, p. 219-228 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Stereolithography
  • Fibronectin
  • Hydrogel
  • Tissue Engineering
  • Cell growth

• Direct DNA sequencing using nanopore sensors

  Bashir, R., Apr 1 2013, In: Genetic Engineering and Biotechnology News. 33, 7, p. 34-35+45

  Research output: Contribution to journal › Article › peer-review

• Direct characterization of hydrodynamic loading on a microelectromechanical systems microstructure

  Mehrnezhad, A., Bashir, R. & Park, K., Mar 14 2016, In: Applied Physics Letters. 108, 11, 114101.

  Research output: Contribution to journal › Article › peer-review

  • microelectromechanical systems
  • hydrodynamics
  • microstructure
  • characterization
  • viscous fluids

• Development of miniaturized walking biological machines

  Chan, V., Park, K., Collens, M. B., Kong, H., Saif, T. A. & Bashir, R., 2012, In: Scientific reports. 2, 857.

  Research output: Contribution to journal › Article › peer-review

  • Locomotion
  • Cardiac Myocytes
  • Walking
  • Leg
  • Friction

• Detection of silver ions using dielectrophoretic tweezers-based force spectroscopy

  Choi, S., Lee, G., Park, I. S., Son, M., Kim, W., Lee, H., Lee, S. Y., Na, S., Yoon, D. S., Bashir, R., Park, J. & Lee, S. W., Nov 15 2016, In: Analytical Chemistry. 88, 22, p. 10867-10875 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Polynucleotides
  • Spectroscopy
  • Silver
  • Metal ions
  • Heavy ions

• Detection of methylation on dsDNA using nanopores in a MoS₂ membrane

  Shim, J., Banerjee, S., Qiu, H., Smithe, K. K. H., Estrada, D., Bello, J., Pop, E., Schulten, K. & Bashir, R., Oct 31 2017, In: Nanoscale. 9, 39, p. 14836-14845 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Methylation
  • Nanopores
  • Membranes
  • DNA
  • Carrier Proteins

• Detection and quantification of methylation in DNA using solid-state nanopores

  Shim, J., Humphreys, G. I., Venkatesan, B. M., Munz, J. M., Zou, X., Sathe, C., Schulten, K., Kosari, F., Nardulli, A. M., Vasmatzis, G. & Bashir, R., 2013, In: Scientific reports. 3, 1389.

  Research output: Contribution to journal › Article › peer-review

  • Nanopores
  • DNA Methylation
  • Methylation
  • Epigenomics
  • 5-Methylcytosine

• Design and integration of a problem-based biofabrication course into an undergraduate biomedical engineering curriculum

  Raman, R., Mitchell, M., Perez-Pinera, P., Bashir, R. & DeStefano, L., Sep 21 2016, In: Journal of Biological Engineering. 10, 1, 10.

  Research output: Contribution to journal › Article › peer-review

  • Biomedical Engineering
  • Biomedical engineering
  • Curricula
  • Curriculum
  • Students

• Delving into BioMEMS

  Bashir, R., Khademhosseini, A. & Sia, S., Nov 1 2011, In: IEEE Pulse. 2, 6, 1 p., 6088916.

  Research output: Contribution to journal › Editorial › peer-review

• Defining the frontiers of bioengineering education at Illinois and beyond

  Amos, J. R., Bashir, R., Cross, K. J., Herman, G. L., Loewenstein, J., Pool, M. A. & Silverman, D., Jun 24 2017, In: ASEE Annual Conference and Exposition, Conference Proceedings. 2017-June

  Research output: Contribution to journal › Conference article › peer-review

  • Bioengineering
  • Curricula
  • Education
  • Teaching
  • Students

• Damage, Healing, and Remodeling in Optogenetic Skeletal Muscle Bioactuators

  Raman, R., Grant, L., Seo, Y., Cvetkovic, C., Gapinske, M., Palasz, A., Dabbous, H., Kong, H., Pinera, P. P. & Bashir, R., Jun 21 2017, In: Advanced Healthcare Materials. 6, 12, 1700030.

  Research output: Contribution to journal › Article › peer-review

  • Optogenetics
  • Muscle
  • Skeletal Muscle
  • Three-Dimensional Printing
  • Technology

• Coupled heterogeneous nanowire-nanoplate planar transistor sensors for giant (>10 V/pH) nernst response

  Go, J., Nair, P. R., Reddy, B., Dorvel, B., Bashir, R. & Alam, M. A., Jul 24 2012, In: ACS Nano. 6, 7, p. 5972-5979 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Nanowires
  • Transistors
  • nanowires
  • transistors
  • Ion sensitive field effect transistors

• Control of nanoscale environment to improve stability of immobilized proteins on diamond surfaces

  Radadia, A. D., Stavis, C. J., Carr, R., Zeng, H., King, W. P., Carlisle, J. A., Aksimentiev, A., Hamers, R. J. & Bashir, R., Mar 22 2011, In: Advanced Functional Materials. 21, 6, p. 1040-1050 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Immobilized Proteins
  • Diamond
  • Diamonds
  • Proteins
  • proteins

• Combining Biomarkers with EMR Data to Identify Patients in Different Phases of Sepsis

  Taneja, I., Reddy, B., Damhorst, G., Dave Zhao, S., Hassan, U., Price, Z., Jensen, T., Ghonge, T., Patel, M., Wachspress, S., Winter, J., Rappleye, M., Smith, G., Healey, R., Ajmal, M., Khan, M., Patel, J., Rawal, H., Sarwar, R., Soni, S. & 6 others, Anwaruddin, S., Davis, B., Kumar, J., White, K., Bashir, R. & Zhu, R., Dec 1 2017, In: Scientific reports. 7, 1, 10800.

  Research output: Contribution to journal › Article › peer-review

  • Electronic Health Records
  • Sepsis
  • Biomarkers
  • Area Under Curve
  • Interleukin 1 Receptor Antagonist Protein

• Characterization of mass and swelling of hydrogel microstructures using MEMS resonant mass sensor arrays

  Millet, L. J., Corbin, E. A., Free, R., Park, K., Kong, H., King, W. P. & Bashir, R., Aug 20 2012, In: Small. 8, 16, p. 2555-2562 8 p.

  Research output: Contribution to journal › Article › peer-review

  • Hydrogels
  • Polyethylene Glycol Dimethacrylate Hydrogel
  • Sensor arrays
  • Swelling
  • MEMS

• Characterization of a 1024 × 1024 DG-BioFET platform

  Duarte-Guevara, C., Swaminathan, V., Reddy, B., Wen, C. H., Huang, Y. J., Huang, J. C., Liu, Y. S. & Bashir, R., 2017, In: Sensors and Actuators, B: Chemical. 250, p. 100-110 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Field effect transistors
  • platforms
  • Amplification
  • field effect transistors
  • characterization

• Cardiomyocyte Imaging Using Real-Time Spatial Light Interference Microscopy (SLIM)

  Bhaduri, B., Wickland, D., Wang, R., Chan, V., Bashir, R. & Popescu, G., Feb 15 2013, In: PloS one. 8, 2, e56930.

  Research output: Contribution to journal › Article › peer-review

  • Interference Microscopy
  • Light interference
  • cardiomyocytes
  • Liquid Crystals
  • Microscopic examination

• Cardiac myocytes' dynamic contractile behavior differs depending on heart segment

  De Souza, E. J., Ahmed, W., Chan, V., Bashir, R. & Saif, T., Feb 2013, In: Biotechnology and bioengineering. 110, 2, p. 628-636 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Cardiac Myocytes
  • Muscle Cells
  • Heart
  • Video Microscopy
  • Microscopic examination

• Bionanoscience in health and medicine

  Bashir, R., May 2012, In: Proceedings of the IEEE. 100, 5, p. 1015-1016 2 p., 6183039.

  Research output: Contribution to journal › Article › peer-review

  • Nanotechnology
  • Medicine
  • Health
  • Biological systems
  • DNA

• Biomimicry, Biofabrication, and Biohybrid Systems: The Emergence and Evolution of Biological Design

  Raman, R. & Bashir, R., Oct 25 2017, In: Advanced Healthcare Materials. 6, 20, 1700496.

  Research output: Contribution to journal › Article › peer-review

  • Biological Evolution
  • Curriculum
  • History
  • Curricula
  • Systems analysis