Find Research Outputs — University of Illinois at Urbana-Champaign

2015

Triennial lactation symposium: Nutrigenomics in dairy cows: Nutrients, transcription factors, and techniques

Bionaz, M., Osorio, J. & Loor, J. J., Dec 18 2015, In: Journal of animal science. 93, 12, p. 5531-5553 23 p.

Research output: Contribution to journal › Article › peer-review

Triennial Lactation symposium: Nutrigenomics in livestock: Systems biology meets nutrition

Loor, J. J., Vailati-Riboni, M., McCann, J. C., Zhou, Z. & Bionaz, M., Dec 18 2015, In: Journal of animal science. 93, 12, p. 5554-5574 21 p.

Research output: Contribution to journal › Article › peer-review

2014

Biomarkers of inflammation, metabolism, and oxidative stress in blood, liver, and milk reveal a better immunometabolic status in peripartal cows supplemented with Smartamine M or MetaSmart

Osorio, J. S., Trevisi, E., Ji, P., Drackley, J. K., Luchini, D., Bertoni, G. & Loor, J. J., Dec 1 2014, In: Journal of Dairy Science. 97, 12, p. 7437-7450 14 p.

Research output: Contribution to journal › Article › peer-review

Central role of the PPARγ gene network in coordinating beef cattle intramuscular adipogenesis in response to weaning age and nutrition

Moisá, S. J., Shike, D. W., Faulkner, D. B., Meteer, W. T., Keisler, D. & Loor, J. J., Jan 8 2014, In: Gene Regulation and Systems Biology. 2014, 8, p. 17-32 16 p.

Research output: Contribution to journal › Article › peer-review

Effect of dietary starch level and high rumen-undegradable protein on endocrine-metabolic status, milk yield, and milk composition in dairy cows during early and late lactation

Piccioli-Cappelli, F., Loor, J. J., Seal, C. J., Minuti, A. & Trevisi, E., Dec 1 2014, In: Journal of Dairy Science. 97, 12, p. 7788-7803 16 p.

Research output: Contribution to journal › Article › peer-review

Effects of arginine concentration on the in Vitro expression of casein and mTOR pathway related genes in mammary epithelial cells from dairy cattle

Wang, M., Xu, B., Wang, H., Bu, D., Wang, J. & Loor, J. J., May 1 2014, In: PloS one. 9, 5, e95985.

Research output: Contribution to journal › Article › peer-review

Effects of level of nutrient intake and age on mammalian target of rapamycin, insulin, and insulin-like growth factor-1 gene network expression in skeletal muscle of young Holstein calves

Wang, P., Drackley, J. K., Stamey-Lanier, J. A., Keisler, D. & Loor, J. J., Jan 2014, In: Journal of Dairy Science. 97, 1, p. 383-391 9 p.

Research output: Contribution to journal › Article › peer-review

Gut response induced by weaning in piglet features marked changes in immune and inflammatory response

Bomba, L., Minuti, A., Moisá, S. J., Trevisi, E., Eufemi, E., Lizier, M., Chegdani, F., Lucchini, F., Rzepus, M., Prandini, A., Rossi, F., Mazza, R., Bertoni, G., Loor, J. J. & Ajmone-Marsan, P., Nov 16 2014, In: Functional and Integrative Genomics. 14, 4, p. 657-671 15 p.

Research output: Contribution to journal › Article › peer-review

Hepatic purinergic signaling gene network expression and its relationship with inflammation and oxidative stress biomarkers in blood from peripartal dairy cattle

Seo, J., Osorio, J. S., Schmitt, E., Corrêa, M. N., Bertoni, G., Trevisi, E. & Loor, J. J., Feb 2014, In: Journal of Dairy Science. 97, 2, p. 861-873 13 p.

Research output: Contribution to journal › Article › peer-review

High-throughput methods redefine the rumen microbiome and its relationship with nutrition and metabolism

McCann, J. C., Wickersham, T. A. & Loor, J. J., Jun 8 2014, In: Bioinformatics and Biology Insights. 8, p. 109-125 17 p.

Research output: Contribution to journal › Review article › peer-review

Inflammation- and lipid metabolism-related gene network expression in visceral and subcutaneous adipose depots of Holstein cows

Ji, P., Drackley, J. K., Khan, M. J. & Loor, J. J., Jun 2014, In: Journal of Dairy Science. 97, 6, p. 3441-3448 8 p.

Research output: Contribution to journal › Article › peer-review

Integrative analyses of hepatic differentially expressed genes and blood biomarkers during the peripartal period between dairy cows overfed or restricted-fed energy prepartum

Shahzad, K., Bionaz, M., Trevisi, E., Bertoni, G., Rodriguez-Zas, S. L. & Loor, J. J., Jun 10 2014, In: PloS one. 9, 6, e99757.

Research output: Contribution to journal › Article › peer-review

ITRAQ-proteomics and bioinformatics analyses of mammary tissue from cows with clinical mastitis due to natural infection with Staphylococci aureus

Huang, J., Luo, G., Zhang, Z., Wang, X., Ju, Z., Qi, C., Zhang, Y., Wang, C., Li, R., Li, J., Yin, W., Xu, Y., Moisá, S. J., Loor, J. J. & Zhong, J., Oct 2 2014, In: BMC genomics. 15, 1, 839.

Research output: Contribution to journal › Article › peer-review

Linoleic and α-linolenic fatty acid consumption over three generations exert cumulative regulation of hepatic expression of genes related to lipid metabolism

Jacometo, C. B., Schmitt, E., Pfeifer, L. F. M., Schneider, A., Bado, F., Da Rosa, F. T., Halfen, S., Del Pino, F. A. B., Loor, J. J., Corrêa, M. N. & Dionello, N. J. L., Jul 2014, In: Genes and Nutrition. 9, 4, 405.

Research output: Contribution to journal › Article › peer-review

Lipoprotein lipase, tissue expression and effects on genes related to fatty acid synthesis in goat mammary epithelial cells

Zhao, W. S., Hu, S. L., Yu, K., Wang, H., Wang, W., Loor, J. & Luo, J., Dec 9 2014, In: International journal of molecular sciences. 15, 12, p. 22757-22771 15 p.

Research output: Contribution to journal › Article › peer-review

Meta-analysis of cancer transcriptomes: A new approach to uncover molecular pathological events in different cancer tissues

Iqbal, S., Ejaz, H., Nawaz, M. S., Loor, J. J. & Naeem, A., Mar 1 2014, In: Network Biology. 4, 1, p. 1-20 20 p.

Research output: Contribution to journal › Article › peer-review

Overfeeding dairy cattle during late-pregnancy alters hepatic pparα-regulated pathways including hepatokines: Impact on metabolism and peripheral insulin sensitivity

Khan, M. J., Jacometo, C. B., Graugnard, D. E., Corrêa, M. N., Schmitt, E., Cardoso, F. & Loor, J. J., Apr 3 2014, In: Gene Regulation and Systems Biology. 2014, 8, p. 97-111 15 p.

Research output: Contribution to journal › Article › peer-review

Overfeeding energy upregulates peroxisome proliferator-activated receptor (PPAR)γ-controlled adipogenic and lipolytic gene networks but does not affect proinflammatory markers in visceral and subcutaneous adipose depots of Holstein cows

Ji, P., Drackley, J. K., Khan, M. J. & Loor, J. J., Jun 2014, In: Journal of Dairy Science. 97, 6, p. 3431-3440 10 p.

Research output: Contribution to journal › Article › peer-review

Peroxisome proliferator-activated receptor γ1 and γ2 isoforms alter lipogenic gene networks in goat mammary epithelial cells to different extents

Shi, H. B., Zhao, W. S., Luo, J., Yao, D. W., Sun, Y. T., Li, J., Shi, H. P. & Loor, J. J., Sep 2014, In: Journal of Dairy Science. 97, 9, p. 5437-5447 11 p.

Research output: Contribution to journal › Article › peer-review

Postpartal immunometabolic gene network expression and function in blood neutrophils are altered in response to prepartal energy intake and postpartal intramammary inflammatory challenge

Moyes, K. M., Graugnard, D. E., Khan, M. J., Mukesh, M. & Loor, J. J., Apr 2014, In: Journal of Dairy Science. 97, 4, p. 2165-2177 13 p.

Research output: Contribution to journal › Article › peer-review

Postpartal subclinical endometritis alters transcriptome profiles in liver and adipose tissue of dairy cows

Akbar, H., Cardoso, F. C., Meier, S., Burke, C., McDougall, S., Mitchell, M., Walker, C., Rodriguez-Zas, S. L., Everts, R. E., Lewin, H. A., Roche, J. R. & Loor, J. J., Feb 19 2014, In: Bioinformatics and Biology Insights. 8, p. 45-63 19 p.

Research output: Contribution to journal › Article › peer-review

Ratio of lysine to methionine alters expression of genes involved in milk protein transcription and translation and mTOR phosphorylation in bovine mammary cells

Nan, X., Bu, D., Li, X., Wang, J., Wei, H., Hu, H., Zhou, L. & Loor, J. J., Apr 1 2014, In: Physiological genomics. 46, 7, p. 268-275 8 p.

Research output: Contribution to journal › Article › peer-review

Regulation of energy metabolism by long-chain fatty acids

Nakamura, M. T., Yudell, B. E. & Loor, J. J., Jan 1 2014, In: Progress in Lipid Research. 53, 1, p. 124-144 21 p.

Research output: Contribution to journal › Review article › peer-review

Ruminal epithelium transcriptome dynamics in response to plane of nutrition and age in young Holstein calves

Naeem, A., Drackley, J. K., Lanier, J. S., Everts, R. E., Rodriguez-Zas, S. L. & Loor, J. J., Mar 2014, In: Functional and Integrative Genomics. 14, 1, p. 261-273 13 p.

Research output: Contribution to journal › Article › peer-review

Smartamine M and MetaSmart supplementation during the peripartal period alter hepatic expression of gene networks in 1-carbon metabolism, inflammation, oxidative stress, and the growth hormone-insulin-like growth factor 1 axis pathways

Osorio, J. S., Ji, P., Drackley, J. K., Luchini, D. & Loor, J. J., Dec 1 2014, In: Journal of Dairy Science. 97, 12, p. 7451-7464 14 p.

Research output: Contribution to journal › Article › peer-review

Treatment with a nonsteroidal antiinflammatory drug after calving did not improve milk production, health, or reproduction parameters in pasture-grazed dairy cows

Meier, S., Priest, N. V., Burke, C. R., Kay, J. K., McDougall, S., Mitchell, M. D., Walker, C. G., Heiser, A., Loor, J. J. & Roche, J. R., May 2014, In: Journal of Dairy Science. 97, 5, p. 2932-2943 12 p.

Research output: Contribution to journal › Article › peer-review

Visceral adipose tissue mass in nonlactating dairy cows fed diets differing in energy density¹

Drackley, J. K., Wallace, R. L., Graugnard, D., Vasquez, J., Richards, B. F. & Loor, J. J., Jun 2014, In: Journal of Dairy Science. 97, 6, p. 3420-3430 11 p.

Research output: Contribution to journal › Article › peer-review

2013

Change in subcutaneous adipose tissue metabolism and gene network expression during the transition period in dairy cows, including differences due to sire genetic merit¹

Khan, M. J., Hosseini, A., Burrell, S., Rocco, S. M., McNamara, J. P. & Loor, J. J., Apr 2013, In: Journal of Dairy Science. 96, 4, p. 2171-2182 12 p.

Research output: Contribution to journal › Article › peer-review

Dietary lipid during late-pregnancy and early-lactation to manipulate metabolic and inflammatory gene network expression in dairy cattle liver with a focus on PPARs

Akbar, H., Schmitt, E., Ballou, M. A., Corrêa, M. N., DePeters, E. J. & Loor, J. J., 2013, In: Gene Regulation and Systems Biology. 2013, 7, p. 103-123 21 p.

Research output: Contribution to journal › Article › peer-review

Dietary marine algae and its influence on tissue gene network expression during milk fat depression in dairy ewes

Bichi, E., Frutos, P., Toral, P. G., Keisler, D., Hervás, G. & Loor, J. J., 2013, In: Animal Feed Science and Technology. 186, 1-2, p. 36-44 9 p.

Research output: Contribution to journal › Article › peer-review

Effect of the level of maternal energy intake prepartum on immunometabolic markers, polymorphonuclear leukocyte function, and neutrophil gene network expression in neonatal holstein heifer calves¹

Osorio, J. S., Trevisi, E., Ballou, M. A., Bertoni, G., Drackley, J. K. & Loor, J. J., Jun 2013, In: Journal of Dairy Science. 96, 6, p. 3573-3587 15 p.

Research output: Contribution to journal › Article › peer-review

Feed restriction, but not l-carnitine infusion, alters the liver transcriptome by inhibiting sterol synthesis and mitochondrial oxidative phosphorylation and increasing gluconeogenesis in mid-lactation dairy cows

Akbar, H., Bionaz, M., Carlson, D. B., Rodriguez-Zas, S. L., Everts, R. E., Lewin, H. A., Drackley, J. K. & Loor, J. J., Apr 2013, In: Journal of Dairy Science. 96, 4, p. 2201-2213 13 p.

Research output: Contribution to journal › Article › peer-review

Functional role of PPARs in ruminants: Potential targets for fine-tuning metabolism during growth and lactation

Bionaz, M., Chen, S., Khan, M. J. & Loor, J. J., 2013, In: PPAR Research. 684159.

Research output: Contribution to journal › Review article › peer-review

Functional welfare-using biochemical and molecular technologies to understand better the welfare state of peripartal dairy cattle

Loor, J. J., Bertoni, G., Hosseini, A., Roche, J. R. & Trevisi, E., 2013, In: Animal Production Science. 53, 9, p. 931-953 23 p.

Research output: Contribution to journal › Article › peer-review

Liver lipid content and inflammometabolic indices in peripartal dairy cows are altered in response to prepartal energy intake and postpartal intramammary inflammatory challenge¹

Graugnard, D. E., Moyes, K. M., Trevisi, E., Khan, M. J., Keisler, D., Drackley, J. K., Bertoni, G. & Loor, J. J., Feb 2013, In: Journal of Dairy Science. 96, 2, p. 918-935 18 p.

Research output: Contribution to journal › Article › peer-review

Milk fat depression induced by dietary marine algae in dairy ewes: Persistency of milk fatty acid composition and animal performance responses

Bichi, E., Hervás, G., Toral, P. G., Loor, J. J. & Frutos, P., Jan 2013, In: Journal of Dairy Science. 96, 1, p. 524-532 9 p.

Research output: Contribution to journal › Article › peer-review

Nutritional management of the transition cow in the 21st century-a paradigm shift in thinking

Roche, J. R., Bell, A. W., Overton, T. R. & Loor, J. J., Aug 19 2013, In: Animal Production Science. 53, 9, p. 1000-1023 24 p.

Research output: Contribution to journal › Article › peer-review

Peroxisome proliferator-activated receptor-γ stimulates the synthesis of monounsaturated fatty acids in dairy goat mammary epithelial cells via the control of stearoyl-coenzyme A desaturase

Shi, H. B., Luo, J., Yao, D. W., Zhu, J. J., Xu, H. F., Shi, H. P. & Loor, J. J., Dec 2013, In: Journal of Dairy Science. 96, 12, p. 7844-7853 10 p.

Research output: Contribution to journal › Article › peer-review

Physiological and nutritional roles of PPAR across species

Bionaz, M., Hausman, G. J., Loor, J. J. & Mandard, S., 2013, In: PPAR Research. 807156.

Research output: Contribution to journal › Editorial › peer-review

Purinergic signaling gene network expression in bovine polymorphonuclear neutrophils during the peripartal period¹

Seo, J., Osorio, J. S. & Loor, J. J., Dec 2013, In: Journal of Dairy Science. 96, 12, p. 7675-7683 9 p.

Research output: Contribution to journal › Article › peer-review

Supplemental smartamine m or metasmart during the transition period benefits postpartal cow performance and blood neutrophil function

Osorio, J. S., Ji, P., Drackley, J. K., Luchini, D. & Loor, J. J., Oct 2013, In: Journal of Dairy Science. 96, 10, p. 6248-6263 16 p.

Research output: Contribution to journal › Article › peer-review

Systems physiology in dairy cattle: Nutritional genomics and beyond

Loor, J. J., Bionaz, M. & Drackley, J. K., Jan 2013, In: Annual Review of Animal Biosciences. 1, p. 365-392 28 p.

Research output: Contribution to journal › Article › peer-review

Yin Yang 1 and adipogenic gene network expression in longissimus muscle of beef cattle in response to nutritional management

Moisá, S. J., Shike, D. W., Meteer, W. T., Keisler, D., Faulkner, D. B. & Loor, J. J., 2013, In: Gene Regulation and Systems Biology. 2013, 7, p. 71-83 13 p.

Research output: Contribution to journal › Article › peer-review

2012

A novel dynamic impact approach (DIA) for functional analysis of time-course omics studies: Validation using the bovine mammary transcriptome

Bionaz, M., Periasamy, K., Rodriguez-Zas, S. L., Hurley, W. L. & Loor, J. J., Mar 16 2012, In: PloS one. 7, 3, e32455.

Research output: Contribution to journal › Article › peer-review

Application of Top-Down and bottom-up systems approaches in ruminant physiology and metabolism

Shahzad, K. & Loor, J. J., 2012, In: Current Genomics. 13, 5, p. 379-394 16 p.

Research output: Contribution to journal › Review article › peer-review

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