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  • Rashid Bashir
2014

Enhanced biosensing resolution with foundry fabricated individually addressable dual-gated ISFETs

Duarte-Guevara, C., Lai, F. L., Cheng, C. W., Reddy, B., Salm, E., Swaminathan, V., Tsui, Y. K., Tuan, H. C., Kalnitsky, A., Liu, Y. S. & Bashir, R., Aug 19 2014, In : Analytical chemistry. 86, 16, p. 8359-8367 9 p.

Research output: Contribution to journalArticle

Flow metering characterization within an electrical cell counting microfluidic device

Hassan, U., Watkins, N. N., Edwards, C. & Bashir, R., Apr 21 2014, In : Lab on a chip. 14, 8, p. 1469-1476 8 p.

Research output: Contribution to journalArticle

Graphene-Based Patterning and Differentiation of C2C12 Myoblasts

Bajaj, P., Rivera, J. A., Marchwiany, D., Solovyeva, V. & Bashir, R., Jul 2014, In : Advanced Healthcare Materials. 3, 7, p. 995-1000 6 p.

Research output: Contribution to journalArticle

Material-mediated proangiogenic factor release pattern modulates quality of regenerated blood vessels

Rich, M. H., Lee, M. K., Baek, K., Jeong, J. H., Kim, D. H., Millet, L. J., Bashir, R. & Kong, H., Dec 28 2014, In : Journal of Controlled Release. 196, p. 363-369 7 p.

Research output: Contribution to journalArticle

Measuring physical properties of neuronal and glial cells with resonant microsensors

Corbin, E. A., Millet, L. J., Keller, K. R., King, W. P. & Bashir, R., May 20 2014, In : Analytical chemistry. 86, 10, p. 4864-4872 9 p.

Research output: Contribution to journalArticle

Micro-masonry of MEMS sensors and actuators

Zhang, Y., Keum, H., Park, K., Bashir, R. & Kim, S., Apr 2014, In : Journal of Microelectromechanical Systems. 23, 2, p. 308-314 7 p., 6570758.

Research output: Contribution to journalArticle

Micro-patterning of mammalian cells on suspended MEMS resonant sensors for long-term growth measurements

Corbin, E. A., Dorvel, B. R., Millet, L. J., King, W. P. & Bashir, R., Apr 21 2014, In : Lab on a chip. 14, 8, p. 1401-1404 4 p.

Research output: Contribution to journalArticle

Nano/micro and spectroscopic approaches to food pathogen detection

Cho, I. H., Radadia, A. D., Farrokhzad, K., Ximenes, E., Bae, E., Singh, A. K., Oliver, H., Ladisch, M., Bhunia, A., Applegate, B., Mauer, L., Bashir, R. & Irudayaraj, J., Jun 2014, In : Annual Review of Analytical Chemistry. 7, p. 65-88 24 p.

Research output: Contribution to journalReview article

New technologies for measuring single cell mass

Popescu, G., Park, K., Mir, M. & Bashir, R., Feb 21 2014, In : Lab on a chip. 14, 4, p. 646-652 7 p.

Research output: Contribution to journalReview article

Three-dimensionally printed biological machines powered by skeletal muscle

Cvetkovic, C., Raman, R., Chan, V., Williams, B. J., Tolish, M., Bajaj, P., Sakar, M. S., Asada, H. H., Saif, M. T. A. & Bashir, R., Jul 15 2014, In : Proceedings of the National Academy of Sciences of the United States of America. 111, 28, p. 10125-10130 6 p.

Research output: Contribution to journalArticle

Utilization and control of bioactuators across multiple length scales

Chan, V., Asada, H. H. & Bashir, R., Feb 21 2014, In : Lab on a chip. 14, 4, p. 653-670 18 p.

Research output: Contribution to journalReview article

2015

A semiconductor bio-electrical platform with addressable thermal control circuits for accelerated bioassay development

Chen, T. T., Wen, C. H., Huang, J. C., Peng, Y. C., Liu, S., Su, S. H., Cheng, L. H., Lai, H. C., Liao, T. C., Lai, F. L., Cheng, C. W., Yang, C. K., Yang, J. H., Hsieh, Y. J., Salm, E., Reddy, B., Tsui, F., Liu, Y. S., Bashir, R. & Chen, M., Feb 20 2015, In : Technical Digest - International Electron Devices Meeting, IEDM. 2015-February, February, p. 15.4.1-15.4.4 7047058.

Research output: Contribution to journalConference article

Biodegradable thin metal foils and spin-on glass materials for transient electronics

Kang, S. K., Hwang, S. W., Yu, S., Seo, J. H., Corbin, E. A., Shin, J., Wie, D. S., Bashir, R., Ma, Z. & Rogers, J. A., Mar 25 2015, In : Advanced Functional Materials. 25, 12, p. 1789-1797 9 p.

Research output: Contribution to journalArticle

Biophysical properties of human breast cancer cells measured using silicon MEMS resonators and atomic force microscopy

Corbin, E. A., Kong, F., Lim, C. T., King, W. P. & Bashir, R., Feb 7 2015, In : Lab on a chip. 15, 3, p. 839-847 9 p.

Research output: Contribution to journalArticle

Electronic desalting for controlling the ionic environment in droplet-based biosensing platforms

Swaminathan, V. V., Dak, P., Reddy, B., Salm, E., Duarte-Guevara, C., Zhong, Y., Fischer, A., Liu, Y. S., Alam, M. A. & Bashir, R., Feb 2 2015, In : Applied Physics Letters. 106, 5, 053105.

Research output: Contribution to journalArticle

Engineering as a new frontier for translational medicine

Chien, S., Bashir, R., Nerem, R. M. & Pettigrew, R., Apr 1 2015, In : Science Translational Medicine. 7, 281, 281fs13.

Research output: Contribution to journalArticle

Enhanced sub-micron colloidal particle separation with interdigitated microelectrode arrays using mixed AC/DC dielectrophoretic scheme

Swaminathan, V. V., Shannon, M. A. & Bashir, R., Jan 1 2015, In : Biomedical microdevices. 17, 2

Research output: Contribution to journalArticle

Fabrication and characterization of optogenetic, multi-strip cardiac muscles

Chan, V., Neal, D. M., Uzel, S. G. M., Kim, H., Bashir, R. & Asada, H. H., May 21 2015, In : Lab on a chip. 15, 10, p. 2258-2268 11 p.

Research output: Contribution to journalArticle

Glacier moraine formation-mimicking colloidal particle assembly in microchanneled, bioactive hydrogel for guided vascular network construction

Lee, M. K., Rich, M. H., Shkumatov, A., Jeong, J. H., Boppart, M. D., Bashir, R., Gillette, M. U., Lee, J. & Kong, H., Jan 1 2015, In : Advanced Healthcare Materials. 4, 2, p. 195-201 7 p.

Research output: Contribution to journalArticle

Graphene-Based Platform for Infrared Near-Field Nanospectroscopy of Water and Biological Materials in an Aqueous Environment

Khatib, O., Wood, J. D., McLeod, A. S., Goldflam, M. D., Wagner, M., Damhorst, G. L., Koepke, J. C., Doidge, G. P., Rangarajan, A., Bashir, R., Pop, E., Lyding, J. W., Thiemens, M. H., Keilmann, F. & Basov, D. N., Aug 25 2015, In : ACS Nano. 9, 8, p. 7968-7975 8 p.

Research output: Contribution to journalArticle

Impedance microbiology and microbial screening strategy for detecting pathogens in food

Flint, S., Naila, A. & Bashir, R., Jan 1 2015, High Throughput Screening for Food Safety Assessment: Biosensor Technologies, Hyperspectral Imaging and Practical Applications. Elsevier Inc., p. 285-300 16 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Mechanical Characterization and Shape Optimization of Fascicle-Like 3D Skeletal Muscle Tissues Contracted with Electrical and Optical Stimuli

Neal, D., Sakar, M. S., Bashir, R., Chan, V. & Asada, H. H., Jun 1 2015, In : Tissue Engineering - Part A. 21, 11-12, p. 1848-1858 11 p.

Research output: Contribution to journalArticle

Microfluidics and Nanotechnology for Detection of Global Infectious Diseases

Damhorst, G. L., Murtagh, M., Rodriguez, W. R. & Bashir, R., Feb 1 2015, In : Proceedings of the IEEE. 103, 2, p. 150-160 11 p., 7067024.

Research output: Contribution to journalReview article

Nanopore-based assay for detection of methylation in double-stranded DNA fragments

Shim, J., Kim, Y., Humphreys, G. I., Nardulli, A. M., Kosari, F., Vasmatzis, G., Taylor, W. R., Ahlquist, D. A., Myong, S. & Bashir, R., Jan 27 2015, In : ACS Nano. 9, 1, p. 290-300 11 p.

Research output: Contribution to journalArticle

On-chip metal/polypyrrole quasi-reference electrodes for robust ISFET operation

Duarte-Guevara, C., Swaminathan, V. V., Burgess, M., Reddy, B., Salm, E., Liu, Y. S., Rodriguez-Lopez, J. & Bashir, R., May 21 2015, In : Analyst. 140, 10, p. 3630-3641 12 p.

Research output: Contribution to journalArticle

Optomechanical measurement of the stiffness of single adherent cells

Park, K., Mehrnezhad, A., Corbin, E. A. & Bashir, R., Jul 14 2015, In : Lab on a chip. 15, 17, p. 3460-3464 5 p.

Research output: Contribution to journalArticle

Photopatterning of hydrogel scaffolds coupled to filter materials using stereolithography for perfused 3D culture of hepatocytes

Neiman, J. A. S., Raman, R., Chan, V., Rhoads, M. G., Raredon, M. S. B., Velazquez, J. J., Dyer, R. L., Bashir, R., Hammond, P. T. & Griffith, L. G., Apr 1 2015, In : Biotechnology and bioengineering. 112, 4, p. 777-787 11 p.

Research output: Contribution to journalArticle

Slowing DNA transport using graphene-DNA interactions

Banerjee, S., Wilson, J., Shim, J., Shankla, M., Corbin, E. A., Aksimentiev, A. & Bashir, R., Feb 11 2015, In : Advanced Functional Materials. 25, 6, p. 936-946 11 p.

Research output: Contribution to journalArticle

Smartphone-Imaged HIV-1 Reverse-Transcription Loop-Mediated Isothermal Amplification (RT-LAMP) on a Chip from Whole Blood

Damhorst, G. L., Duarte-Guevara, C., Chen, W., Ghonge, T., Cunningham, B. T. & Bashir, R., Sep 1 2015, In : Engineering. 1, 3, p. 324-335 12 p.

Research output: Contribution to journalArticle

Stereolithographic 3D bioprinting for biomedical applications

Raman, R. & Bashir, R., Aug 7 2015, Essentials of 3D Biofabrication and Translation. Elsevier Inc., p. 89-121 33 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Tip-based nanofabrication of arbitrary shapes of graphene nanoribbons for device applications

Hu, H., Banerjee, S., Estrada, D., Bashir, R. & King, W. P., 2015, In : RSC Advances. 5, 46, p. 37006-37012 7 p.

Research output: Contribution to journalArticle

2016

3D printing enables separation of orthogonal functions within a hydrogel particle

Raman, R., Clay, N. E., Sen, S., Melhem, M., Qin, E., Kong, H. & Bashir, R., Jan 1 2016, In : Biomedical microdevices. 18, 3, 49.

Research output: Contribution to journalArticle

Biaxial Dielectrophoresis Force Spectroscopy: A Stoichiometric Approach for Examining Intermolecular Weak Binding Interactions

Park, I. S., Kwak, T. J., Lee, G., Son, M., Choi, J. W., Choi, S., Nam, K., Lee, S. Y., Chang, W. J., Eom, K., Yoon, D. S., Lee, S., Bashir, R. & Lee, S. W., Apr 26 2016, In : ACS Nano. 10, 4, p. 4011-4019 9 p.

Research output: Contribution to journalArticle

Design and integration of a problem-based biofabrication course into an undergraduate biomedical engineering curriculum

Raman, R., Mitchell, M., Perez-Pinera, P., Bashir, R. & DeStefano, L., Sep 21 2016, In : Journal of Biological Engineering. 10, 1, 10.

Research output: Contribution to journalArticle

Detection of silver ions using dielectrophoretic tweezers-based force spectroscopy

Choi, S., Lee, G., Park, I. S., Son, M., Kim, W., Lee, H., Lee, S. Y., Na, S., Yoon, D. S., Bashir, R., Park, J. & Lee, S. W., Jan 1 2016, In : Analytical chemistry. 88, 22, p. 10867-10875 9 p.

Research output: Contribution to journalArticle

Direct characterization of hydrodynamic loading on a microelectromechanical systems microstructure

Mehrnezhad, A., Bashir, R. & Park, K., Mar 14 2016, In : Applied Physics Letters. 108, 11, 114101.

Research output: Contribution to journalArticle

Droplet-based biosensing for lab-on-a-chip, open microfluidics platforms

Dak, P., Ebrahimi, A., Swaminathan, V., Duarte-Guevara, C., Bashir, R. & Alam, M. A., 2016, In : Biosensors. 6, 2, 14.

Research output: Contribution to journalReview article

Dynamic mechanical measurement of the viscoelasticity of single adherent cells

Corbin, E. A., Adeniba, O. O., Ewoldt, R. H. & Bashir, R., Feb 29 2016, In : Applied Physics Letters. 108, 9, 093701.

Research output: Contribution to journalArticle

Electrical Chips for Biological Point-of-Care Detection

Reddy, B., Salm, E. & Bashir, R., Jul 11 2016, In : Annual Review of Biomedical Engineering. 18, p. 329-355 27 p.

Research output: Contribution to journalReview article

High-Resolution Projection Microstereolithography for Patterning of Neovasculature

Raman, R., Bhaduri, B., Mir, M., Shkumatov, A., Lee, M. K., Popescu, G., Kong, H. & Bashir, R., Mar 9 2016, In : Advanced Healthcare Materials. 5, 5, p. 610-619 10 p.

Research output: Contribution to journalArticle

HIV-1 IIIB capture from whole blood on magnetic microparticles

Damhorst, G. L., Kooiman, J. M. & Bashir, R., Oct 13 2016, 2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2016. Institute of Electrical and Electronics Engineers Inc., p. 5785-5788 4 p. 7592042. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS; vol. 2016-October).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Magnetophoretic-based microfluidic device for DNA Concentration

Shim, S., Shim, J., Taylor, W. R., Kosari, F., Vasmatzis, G., Ahlquist, D. A. & Bashir, R., Apr 1 2016, In : Biomedical microdevices. 18, 2, p. 1-8 8 p., 28.

Research output: Contribution to journalArticle

Microcantilevers track single-cell mass

Bashir, R., Nov 8 2016, In : Nature Biotechnology. 34, 11, p. 1125-11260 10136 p.

Research output: Contribution to journalShort survey

Microfluidic differential immunocapture biochip for specific leukocyte counting

Hassan, U., Watkins, N. N., Reddy, B., Damhorst, G. & Bashir, R., Apr 1 2016, In : Nature Protocols. 11, 4, p. 714-726 13 p.

Research output: Contribution to journalArticle

Modeling and Analysis of Intercalant Effects on Circular DNA Conformation

Krueger, E., Shim, J., Fathizadeh, A., Chang, A. N., Subei, B., Yocham, K. M., Davis, P. H., Graugnard, E., Khalili-Araghi, F., Bashir, R., Estrada, D. & Fologea, D., Sep 27 2016, In : ACS Nano. 10, 9, p. 8910-8917 8 p.

Research output: Contribution to journalArticle

On-chip electrical detection of parallel loop-mediated isothermal amplification with DG-BioFETs for the detection of foodborne bacterial pathogens

Duarte-Guevara, C., Swaminathan, V. V., Reddy, B., Huang, J. C., Liu, Y. S. & Bashir, R., Jan 1 2016, In : RSC Advances. 6, 106, p. 103872-103887 16 p.

Research output: Contribution to journalArticle

On-chip PMA labeling of foodborne pathogenic bacteria for viable qPCR and qLAMP detection

Duarte-Guevara, P., Duarte-Guevara, C., Ornob, A. & Bashir, R., Aug 1 2016, In : Microfluidics and Nanofluidics. 20, 8, 114.

Research output: Contribution to journalArticle

Optogenetic skeletal muscle-powered adaptive biological machines

Raman, R., Cvetkovic, C., Uzel, S. G. M., Platt, R. J., Sengupta, P., Kamm, R. D. & Bashir, R., Mar 29 2016, In : Proceedings of the National Academy of Sciences of the United States of America. 113, 13, p. 3497-3502 6 p.

Research output: Contribution to journalArticle

2017

3D Printed Stem-Cell-Laden, Microchanneled Hydrogel Patch for the Enhanced Release of Cell-Secreting Factors and Treatment of Myocardial Infarctions

Melhem, M. R., Park, J., Knapp, L., Reinkensmeyer, L., Cvetkovic, C., Flewellyn, J., Lee, M. K., Jensen, T. W., Bashir, R., Kong, H. & Schook, L. B., Sep 11 2017, In : ACS Biomaterials Science and Engineering. 3, 9, p. 1980-1987 8 p.

Research output: Contribution to journalArticle

A modular approach to the design, fabrication, and characterization of muscle-powered biological machines

Raman, R., Cvetkovic, C. & Bashir, R., Mar 1 2017, In : Nature Protocols. 12, 3, p. 519-533 15 p.

Research output: Contribution to journalArticle