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• 2021

  Abundance of solute carrier family 27 member 6 (: SLC27A6) in the bovine mammary gland alters fatty acid metabolism

  Zhang, H., Shen, Z., Yang, Z., Jiang, H., Chu, S., Mao, Y., Li, M., Chen, Z., Aboragah, A., Loor, J. J. & Yang, Z., Jun 7 2021, In: Food and Function. 12, 11, p. 4909-4920 12 p.

  Research output: Contribution to journal › Article › peer-review

• Abusive Language Detection in Heterogeneous Contexts: Dataset Collection and the Role of Supervised Attention

  Gong, H., Valido, A., Ingram, K. M., Fanti, G., Bhat, S. & Espelage, D. L., 2021, 35th AAAI Conference on Artificial Intelligence, AAAI 2021. Association for the Advancement of Artificial Intelligence, p. 14804-14812 9 p. (35th AAAI Conference on Artificial Intelligence, AAAI 2021; vol. 17A).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Academic Caregivers on Organizational and Community Resilience in Academia (Fuck Individual Resilience)

  Ahn, S. J. G., Cripe, E. T., Foucault Welles, B., McGregor, S. C., Pearce, K. E., Usher, N. & Vitak, J., Jun 1 2021, In: Communication, Culture and Critique. 14, 2, p. 301-305 5 p.

  Research output: Contribution to journal › Review article › peer-review

• A Call to Action: Marshaling Science for Society

  Fenster, C. B., Anderson, G. J., Berenbaum, M. R., Burris, J. E., Collins, J. P., Colwell, R. R., Cracraft, J., Covich, A. P., Ehrlich, P. R., Eshbaugh, W. H., James, F. C., Futuyma, D. J., Holsinger, K. E., Likens, G. E., Lovejoy, T. E., Mooney, H. A., Raven, P. H., Smith, K. C., Stafford, S. G., Strain, B. R., & 4 othersTravis, J., Wake, M. H., Wall, D. H. & Weis, J. S., Jan 1 2021, In: BioScience. 71, 1, p. 7-8 2 p.

  Research output: Contribution to journal › Review article › peer-review

  Open Access

• A cancer mutation promotes EphA4 oligomerization and signaling by altering the conformation of the SAM domain

  Light, T. P., Gomez-Soler, M., Wang, Z., Karl, K., Zapata-Mercado, E., Gehring, M. P., Lechtenberg, B. C., Pogorelov, T. V., Hristova, K. & Pasquale, E. B., Jul 1 2021, In: Journal of Biological Chemistry. 297, 1, 100876.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• A canonical purification for the entanglement wedge cross-section

  Dutta, S. & Faulkner, T., Mar 2021, In: Journal of High Energy Physics. 2021, 3, 178.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Accelerated, scalable and reproducible AI-driven gravitational wave detection

  Huerta, E. A., Khan, A., Huang, X., Tian, M., Levental, M., Chard, R., Wei, W., Heflin, M., Katz, D. S., Kindratenko, V., Mu, D., Blaiszik, B. & Foster, I., Oct 2021, In: Nature Astronomy. 5, 10, p. 1062-1068 7 p.

  Research output: Contribution to journal › Article › peer-review

• Accelerated design and discovery of perovskites with high conductivity for energy applications through machine learning

  Priya, P. & Aluru, N. R., Dec 2021, In: npj Computational Materials. 7, 1, 90.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Accelerated J-resolved ¹H-MRSI with limited and sparse sampling of (k,t₁,t₂)-space

  Tang, L., Zhao, Y., Li, Y., Guo, R., Clifford, B., El Fakhri, G., Ma, C., Liang, Z. P. & Luo, J., Jan 1 2021, In: Magnetic Resonance in Medicine. 85, 1, p. 30-41 12 p.

  Research output: Contribution to journal › Article › peer-review

• Accelerated molecular dynamics simulations of dislocation climb in nickel

  Fey, L. T. W., Tan, A. M. Z., Swinburne, T. D., Perez, D. & Trinkle, D. R., Aug 2021, In: Physical Review Materials. 5, 8, 083603.

  Research output: Contribution to journal › Article › peer-review

• Accelerated numerical modeling of RF circuits using network characteristic mode analysis

  Li, H., Jin, J. M., Hajiaboli, A. & Jachowski, D. R., Nov 1 2021, In: International Journal of Numerical Modelling: Electronic Networks, Devices and Fields. 34, 6, e2898.

  Research output: Contribution to journal › Article › peer-review

• Accelerated polymerization of N-carboxyanhydrides catalyzed by crown ether

  Xia, Y., Song, Z., Tan, Z., Xue, T., Wei, S., Zhu, L., Yang, Y., Fu, H., Jiang, Y., Lin, Y., Lu, Y., Ferguson, A. L. & Cheng, J., Dec 2021, In: Nature communications. 12, 1, 732.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Accelerated screening of colloidal nanocrystals using artificial neural network-assisted autonomous flow reactor technology

  Vikram, A., Brudnak, K., Zahid, A., Shim, M. & Kenis, P. J. A., Oct 28 2021, In: Nanoscale. 13, 40, p. 17028-17039 12 p.

  Research output: Contribution to journal › Article › peer-review

• Accelerate Non-unit Stride Convolutions with Winograd Algorithms

  Pan, J. & Chen, D., Jan 18 2021, Proceedings of the 26th Asia and South Pacific Design Automation Conference, ASP-DAC 2021. Institute of Electrical and Electronics Engineers Inc., p. 358-364 7 p. 3431534. (Proceedings of the Asia and South Pacific Design Automation Conference, ASP-DAC).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Accelerating anaerobic digestion for methane production: Potential role of direct interspecies electron transfer

  Wang, Z., Wang, T., Si, B., Watson, J. & Zhang, Y., Jul 2021, In: Renewable and Sustainable Energy Reviews. 145, 111069.

  Research output: Contribution to journal › Review article › peer-review

• Accelerating Distributed-memory Autotuning via Statistical Analysis of Execution Paths

  Hutter, E. & Solomonik, E., May 2021, Proceedings - 2021 IEEE 35th International Parallel and Distributed Processing Symposium, IPDPS 2021. Institute of Electrical and Electronics Engineers Inc., p. 46-57 12 p. 9460475. (Proceedings - 2021 IEEE 35th International Parallel and Distributed Processing Symposium, IPDPS 2021).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Accelerating DNN Architecture Search at Scale Using Selective Weight Transfer

  Liu, H., Nicolae, B., Di, S., Cappello, F. & Jog, A., 2021, Proceedings - 2021 IEEE International Conference on Cluster Computing, Cluster 2021. Institute of Electrical and Electronics Engineers Inc., p. 82-93 12 p. (Proceedings - IEEE International Conference on Cluster Computing, ICCC; vol. 2021-September).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Accelerating Fourier and Number Theoretic Transforms using Tensor Cores and Warp Shuffles

  Durrani, S., Chughtai, M. S., Hidayetoglu, M., Tahir, R., Dakkak, A., Rauchwerger, L., Zaffar, F. & Hwu, W. M., 2021, Proceedings - 30th International Conference on Parallel Architectures and Compilation Techniques, PACT 2021. Lee, J. & Cohen, A. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 345-355 11 p. (Parallel Architectures and Compilation Techniques - Conference Proceedings, PACT; vol. 2021-September).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Accelerating Messages by Avoiding Copies in an Asynchronous Task-based Programming Model

  Bhat, N., White, S., Ramos, E. & Kale, L. V., 2021, Proceedings of ESPM2 2021: 6th International IEEE Workshop on Extreme Scale Programming Models and Middleware, Held in conjunction with SC 2021: The International Conference for High Performance Computing, Networking, Storage and Analysis. Institute of Electrical and Electronics Engineers Inc., p. 10-19 10 p. (Proceedings of ESPM2 2021: 6th International IEEE Workshop on Extreme Scale Programming Models and Middleware, Held in conjunction with SC 2021: The International Conference for High Performance Computing, Networking, Storage and Analysis).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Accelerating Mobile Applications with Parallel High-bandwidth and Low-latency Channels

  Sentosa, W., Chandrasekaran, B., Brighten Godfrey, P., Hassanieh, H., Maggs, B. & Singla, A., Feb 24 2021, HotMobile 2021 - Proceedings of the 22nd International Workshop on Mobile Computing Systems and Applications. Association for Computing Machinery, Inc, p. 1-7 7 p. (HotMobile 2021 - Proceedings of the 22nd International Workshop on Mobile Computing Systems and Applications).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Accelerating SARS-CoV-2 low frequency variant calling on ultra deep sequencing datasets

  Kille, B., Liu, Y., Sapoval, N., Nute, M., Rauchwerger, L., Amato, N. & Treangen, T. J., Jun 2021, 2021 IEEE International Parallel and Distributed Processing Symposium Workshops, IPDPSW 2021 - In conjunction with IEEE IPDPS 2021. Institute of Electrical and Electronics Engineers Inc., p. 204-208 5 p. 9460605. (2021 IEEE International Parallel and Distributed Processing Symposium Workshops, IPDPSW 2021 - In conjunction with IEEE IPDPS 2021).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Accelerating T2 mapping of the brain by integrating deep learning priors with low-rank and sparse modeling

  Meng, Z., Guo, R., Li, Y., Guan, Y., Wang, T., Zhao, Y., Sutton, B., Li, Y. & Liang, Z-P., Mar 2021, In: Magnetic Resonance in Medicine. 85, 3, p. 1455-1467 13 p.

  Research output: Contribution to journal › Article › peer-review

• Accelerating the Rate of Progress in Reducing Mental Health Burdens: Recommendations for Training the Next Generation of Clinical Psychologists

  Berenbaum, H., Washburn, J. J., Sbarra, D., Reardon, K. W., Schuler, T., Teachman, B. A., Hollon, S. D., Atkins, M. S., Hamilton, J. L., Hetrick, W. P., Tackett, J. L., Cody, M. W., Klepac, R. K. & Lee, S. S., 2021, In: Clinical Psychology: Science and Practice. 28, 2, p. 107-123 17 p.

  Research output: Contribution to journal › Article › peer-review

• Access to Daylight and Views Improves Physical and Emotional Wellbeing of Office Workers: A Crossover Study

  Woo, M., MacNaughton, P., Lee, J., Tinianov, B., Satish, U. & Boubekri, M., Sep 8 2021, In: Frontiers in Sustainable Cities. 3, 690055.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Access to the trade: Monopoly and mobility in european craft guilds in the seventeenth and eighteenth centuries

  Prak, M., Crowston, C. H., de Munck, B., Kissane, C., Minns, C., Schalk, R. & Wallis, P., 2021, In: Journal of Social History. 54, 2, p. 421-452 32 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• AccGuard: Secure and Trusted Computation on Remote FPGA Accelerators

  Ren, W., Pan, J. & Chen, D., 2021, Proceedings - 2021 IEEE International Symposium on Smart Electronic Systems, iSES 2021. Institute of Electrical and Electronics Engineers Inc., p. 378-383 6 p. (Proceedings - 2021 IEEE International Symposium on Smart Electronic Systems, iSES 2021).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• Accommodating Casting and Fixturing Errors by Adjusting the Machining Coordinate Frame

  Ko, H. W., Chen, Y., Lee, N., Bhapkar, R., Kapoor, S. & Ferreira, P., Apr 2021, In: Journal of Computing and Information Science in Engineering. 21, 2, 4048716.

  Research output: Contribution to journal › Article › peer-review

• Accounting for Democracy: Excessive Subjects in a State of Consensus

  Delgado, L. E., Aug 1 2021, In: Boundary 2. 48, 3, p. 115-144 30 p.

  Research output: Contribution to journal › Article › peer-review

• Accounting for global value chains: rising global inequality in the wake of COVID-19?

  Court, C. D., Ferreira, J. P., Hewings, G. J. D. & Lahr, M. L., 2021, In: International Review of Applied Economics. 35, 6, p. 813-831 19 p.

  Research output: Contribution to journal › Article › peer-review

• Accretion disc cooling and narrow absorption lines in the tidal disruption event at 2019dsg

  Cannizzaro, G., Wevers, T., Jonker, P. G., Pérez-Torres, M. A., Moldon, J., Mata-Sánchez, D., Leloudas, G., Pasham, D. R., Mattila, S., Arcavi, I., Decker French, K., Onori, F., Inserra, C., Nicholl, M., Gromadzki, M., Chen, T. W., Müller-Bravo, T. E., Short, P., Anderson, J. P., Young, D. R., & 6 othersGendreau, K. C., Arzoumanian, Z., Löwenstein, M., Remillard, R., Roy, R. & Hiramatsu, D., Jun 1 2021, In: Monthly Notices of the Royal Astronomical Society. 504, 1, p. 792-815 24 p.

  Research output: Contribution to journal › Article › peer-review

• Accretion onto a small black hole at the center of a neutron star

  Richards, C. B., Baumgarte, T. W. & Shapiro, S. L., May 6 2021, In: Physical Review D. 103, 10, 104009.

  Research output: Contribution to journal › Article › peer-review

• Accretion onto black holes inside neutron stars with piecewise-polytropic equations of state: Analytic and numerical treatments

  Schnauck, S. C., Baumgarte, T. W. & Shapiro, S. L., Dec 15 2021, In: Physical Review D. 104, 12, 123021.

  Research output: Contribution to journal › Article › peer-review

• Accumbofrontal tract integrity is related to early life adversity and feedback learning

  Kennedy, B. V., Hanson, J. L., Buser, N. J., van den Bos, W., Rudolph, K. D., Davidson, R. J. & Pollak, S. D., Dec 2021, In: Neuropsychopharmacology. 46, 13, p. 2288-2294 7 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Accurate Large-scale Phylogeny-Aware Alignment using BAli-Phy

  Gupta, M., Zaharias, P. & Warnow, T., Dec 15 2021, In: Bioinformatics (Oxford, England). 37, 24, p. 4677-4683 7 p.

  Research output: Contribution to journal › Article › peer-review

• Accurate quantification and detection of Septoria glycines in soybean using quantitative PCR

  Lin, H. A. & Mideros, S. X., Jan 2021, In: Current Plant Biology. 25, 100192.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• ACE2-Based Decoy Receptors for SARS Coronavirus 2

  Jing, W. & Procko, E., Sep 2021, In: Proteins. 89, 9, p. 1065-1078 14 p.

  Research output: Contribution to journal › Review article › peer-review

• ACeD: Scalable Data Availability Oracle

  Sheng, P., Xue, B., Kannan, S. & Viswanath, P., 2021, Financial Cryptography and Data Security - 25th International Conference, FC 2021, Revised Selected Papers. Borisov, N. & Diaz, C. (eds.). Springer, p. 299-318 20 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12675 LNCS).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• A characteristic optical variability time scale in astrophysical accretion disks

  Burke, C. J., Shen, Y., Blaes, O., Gammie, C. F., Horne, K., Jiang, Y. F., Liu, X., McHardy, I. M., Morgan, C. W., Scaringi, S. & Yang, Q., Aug 13 2021, In: Science. 373, 6556, p. 789-792 4 p.

  Research output: Contribution to journal › Article › peer-review

• A Checklist to Assess Childbearing Intentions and Promote Referral to Preconception Care or Contraception: A Multi-Site Study

  Mirabal-Beltran, R., Anderson, J., Dariotis, J. K. & Finocchario-Kessler, S., May 2021, In: Maternal and child health journal. 25, 5, p. 786-795 10 p.

  Research output: Contribution to journal › Article › peer-review

• Achieving a quantum smart workforce

  Aiello, C. D., Awschalom, D. D., Bernien, H., Brower, T., Brown, K. R., Brun, T. A., Caram, J. R., Chitambar, E., Di Felice, R., Edmonds, K. M., Fox, M. F. J., Haas, S., Holleitner, A. W., Hudson, E. R., Hunt, J. H., Joynt, R., Koziol, S., Larsen, M., Lewandowski, H. J., McClure, D. T., & 14 othersPalsberg, J., Passante, G., Pudenz, K. L., Richardson, C. J. K., Rosenberg, J. L., Ross, R. S., Saffman, M., Singh, M., Steuerman, D. W., Stark, C., Thijssen, J., Vamivakas, A. N., Whitfield, J. D. & Zwickl, B. M., Jul 2021, In: Quantum Science and Technology. 6, 3, 030501.

  Research output: Contribution to journal › Review article › peer-review

  Open Access

• A chromosomal assembly of the soybean cyst nematode genome

  Masonbrink, R. E., Maier, T. R., Hudson, M., Severin, A. & Baum, T., Oct 2021, In: Molecular ecology resources. 21, 7, p. 2407-2422 16 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Acid resistance of metakaolin-based, bamboo fiber geopolymer composites

  Sá Ribeiro, M. G., Sá Ribeiro, M. G., Keane, P. F., Sardela, M. R., Kriven, W. M. & Sá Ribeiro, R. A., Oct 4 2021, In: Construction and Building Materials. 302, 124194.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• A CNN based vision-proprioception fusion method for robust UGV Terrain classification

  Chen, Y., Rastogi, C. & Norris, W. R., Oct 2021, In: IEEE Robotics and Automation Letters. 6, 4, p. 7965-7972 8 p., 9507312.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• A Coalitional Cyber-Insurance Design Considering Power System Reliability and Cyber Vulnerability

  Lau, P., Wang, L., Liu, Z., Wei, W. & Ten, C. W., Nov 1 2021, In: IEEE Transactions on Power Systems. 36, 6, p. 5512-5524 13 p.

  Research output: Contribution to journal › Article › peer-review

• A College Entrance Essay Exam Intervention for Students With High-Incidence Disabilities and Struggling Writers

  Ray, A. B. & Graham, S., Nov 2021, In: Learning Disability Quarterly. 44, 4, p. 275-287 13 p.

  Research output: Contribution to journal › Article › peer-review

• A combination of cross-neutralizing antibodies synergizes to prevent SARS-CoV-2 and SARS-CoV pseudovirus infection

  Liu, H., Yuan, M., Huang, D., Bangaru, S., Zhao, F., Lee, C. C. D., Peng, L., Barman, S., Zhu, X., Nemazee, D., Burton, D. R., van Gils, M. J., Sanders, R. W., Kornau, H. C., Reincke, S. M., Prüss, H., Kreye, J., Wu, N. C., Ward, A. B. & Wilson, I. A., May 12 2021, In: Cell Host and Microbe. 29, 5, p. 806-818.e6

  Research output: Contribution to journal › Article › peer-review

  Open Access

• A community challenge to evaluate RNA-seq, fusion detection, and isoform quantification methods for cancer discovery

  SMC-RNA Challenge Participants & Ahsen, M. E., Aug 18 2021, In: Cell Systems. 12, 8, p. 827-838.e5

  Research output: Contribution to journal › Article › peer-review

  Open Access

• A community resource for paired genomic and metabolomic data mining

  Schorn, M. A., Verhoeven, S., Ridder, L., Huber, F., Acharya, D. D., Aksenov, A. A., Aleti, G., Moghaddam, J. A., Aron, A. T., Aziz, S., Bauermeister, A., Bauman, K. D., Baunach, M., Beemelmanns, C., Beman, J. M., Berlanga-Clavero, M. V., Blacutt, A. A., Bode, H. B., Boullie, A., Brejnrod, A., & 90 othersBugni, T. S., Calteau, A., Cao, L., Carrión, V. J., Castelo-Branco, R., Chanana, S., Chase, A. B., Chevrette, M. G., Costa-Lotufo, L. V., Crawford, J. M., Currie, C. R., Cuypers, B., Dang, T., de Rond, T., Demko, A. M., Dittmann, E., Du, C., Drozd, C., Dujardin, J. C., Dutton, R. J., Edlund, A., Fewer, D. P., Garg, N., Gauglitz, J. M., Gentry, E. C., Gerwick, L., Glukhov, E., Gross, H., Gugger, M., Guillén Matus, D. G., Helfrich, E. J. N., Hempel, B. F., Hur, J. S., Iorio, M., Jensen, P. R., Kang, K. B., Kaysser, L., Kelleher, N. L., Kim, C. S., Kim, K. H., Koester, I., König, G. M., Leao, T., Lee, S. R., Lee, Y. Y., Li, X., Little, J. C., Maloney, K. N., Männle, D., Martin H, C., McAvoy, A. C., Metcalf, W. W., Mohimani, H., Molina-Santiago, C., Moore, B. S., Mullowney, M. W., Muskat, M., Nothias, L. F., O’Neill, E. C., Parkinson, E. I., Petras, D., Piel, J., Pierce, E. C., Pires, K., Reher, R., Romero, D., Roper, M. C., Rust, M., Saad, H., Saenz, C., Sanchez, L. M., Sørensen, S. J., Sosio, M., Süssmuth, R. D., Sweeney, D., Tahlan, K., Thomson, R. J., Tobias, N. J., Trindade-Silva, A. E., van Wezel, G. P., Wang, M., Weldon, K. C., Zhang, F., Ziemert, N., Duncan, K. R., Crüsemann, M., Rogers, S., Dorrestein, P. C., Medema, M. H. & van der Hooft, J. J. J., Apr 2021, In: Nature chemical biology. 17, 4, p. 363-368 6 p.

  Research output: Contribution to journal › Comment/debate › peer-review

  Open Access

• A Community Roadmap for Scientific Workflows Research and Development

  Da Silva, R. F., Casanova, H., Chard, K., Altintas, I., Badia, R. M., Balis, B., Coleman, T., Coppens, F., Di Natale, F., Enders, B., Fahringer, T., Filgueira, R., Fursin, G., Garijo, D., Goble, C., Howell, D., Jha, S., Katz, D. S., Laney, D., Leser, U., & 9 othersMalawski, M., Mehta, K., Pottier, L., Ozik, J., Luc Peterson, J., Ramakrishnan, L., Soiland-Reyes, S., Thain, D. & Wolf, M., 2021, Proceedings of WORKS 2021: 16th Workshop on Workflows in Support of Large-Scale Science, Held in conjunction with SC 2021: The International Conference for High Performance Computing, Networking, Storage and Analysis. Institute of Electrical and Electronics Engineers Inc., p. 81-90 10 p. (Proceedings of WORKS 2021: 16th Workshop on Workflows in Support of Large-Scale Science, Held in conjunction with SC 2021: The International Conference for High Performance Computing, Networking, Storage and Analysis).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

• A compact photonic resonator absorption microscope for point of care digital resolution nucleic acid molecular diagnostics

  Ghosh, S., Li, N., Xiong, Y., Ju, Y. G., Rathslag, M. P., Onal, E. G., Falkiewicz, E., Kohli, M. & Cunningham, B. T., Aug 1 2021, In: Biomedical Optics Express. 12, 8, p. 4637-4650 14 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access