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2014
Understanding the impact of fractionation and dynamic exclusion on proteomics
Zavala, C., Nixon, S., Southey, B. R., Wu, C., Romanova, E. V., Sweedler, J. V. & Rodriguez-Zas, S. L., 2014, Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014. International Society for Computers and Their Applications, p. 93-96 4 p. (Proceedings of the 6th International Conference on Bioinformatics and Computational Biology, BICOB 2014).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
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Identification of best indicators of peptide-spectrum match using a permutation resampling approach
Akhtar, M. N., Southey, B. R., Andrén, P. E., Sweedler, J. V. & Rodriguez-Zas, S. L., Oct 30 2014, In: Journal of Bioinformatics and Computational Biology. 12, 5, 1440001.Research output: Contribution to journal › Article › peer-review
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2012
Comparative peptidomics analysis of neural adaptations in rats repeatedly exposed to amphetamine
Romanova, E. V., Lee, J. E., Kelleher, N. L., Sweedler, J. V. & Gulley, J. M., Nov 2012, In: Journal of Neurochemistry. 123, 2, p. 276-287 12 p.Research output: Contribution to journal › Article › peer-review
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2020
Differential post-translational amino acid isomerization found among neuropeptides in aplysia californica
Mast, D. H., Checco, J. W. & Sweedler, J. V., Jan 17 2020, In: ACS chemical biology. 15, 1, p. 272-281 10 p.Research output: Contribution to journal › Article › peer-review
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Removing Formaldehyde-Induced Peptidyl Crosslinks Enables Mass Spectrometry Imaging of Peptide Hormone Distributions from Formalin-Fixed Paraffin-Embedded Tissues
Lee, D. K., Rubakhin, S. S., Kusmartseva, I., Wasserfall, C., Atkinson, M. A. & Sweedler, J. V., Dec 7 2020, In: Angewandte Chemie - International Edition. 59, 50, p. 22584-22590 7 p.Research output: Contribution to journal › Article › peer-review
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2014
Correction: Spatial organization of Pseudomonas aeruginosa biofilms probed by combined matrix-assisted laser desorption ionization mass spectrometry and confocal raman microscopy
Masyuko, R. N., Lanni, E. J., Driscoll, C. M., Shrout, J. D., Sweedler, J. V. & Bohn, P. W., Oct 15 2014, In: Analyst. 139, 22, p. 6058-6060 3 p.Research output: Contribution to journal › Article › peer-review
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2012
Therapeutic peptide production in Drosophila
Park, D., Hou, X., Sweedler, J. V. & Taghert, P. H., Aug 2012, In: Peptides. 36, 2, p. 251-256 6 p.Research output: Contribution to journal › Article › peer-review
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A protease for 'middle-down' proteomics
Wu, C., Tran, J. C., Zamdborg, L., Durbin, K. R., Li, M., Ahlf, D. R., Early, B. P., Thomas, P. M., Sweedler, J. V. & Kelleher, N. L., Aug 1 2012, In: Nature Methods. 9, 8, p. 822-824 3 p.Research output: Contribution to journal › Article › peer-review
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2014
Fibrinogen α-chain-derived peptide is upregulated in hippocampus of rats exposed to acute morphine injection and spontaneous alternation testing
Maki, A. E., Morris, K. A., Catherman, K., Chen, X., Hatcher, N. G., Gold, P. E. & Sweedler, J. V., Jun 2014, In: Pharmacology Research and Perspectives. 2, 3, e00037.Research output: Contribution to journal › Article › peer-review
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2012
Mechanical tension modulates local and global vesicle dynamics in neurons
Ahmed, W. W., Li, T. C., Rubakhin, S. S., Chiba, A., Sweedler, J. V. & Saif, T. A., Jun 2012, In: Cellular and Molecular Bioengineering. 5, 2, p. 155-164 10 p.Research output: Contribution to journal › Article › peer-review
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First survey and functional annotation of prohormone and convertase genes in the pig
Porter, K. I., Southey, B. R., Sweedler, J. V. & Rodriguez-Zas, S. L., Nov 15 2012, In: BMC genomics. 13, 1, 582.Research output: Contribution to journal › Article › peer-review
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Label-free quantitation of peptide release from neurons in a microfluidic device with mass spectrometry imaging
Zhong, M., Lee, C. Y., Croushore, C. A. & Sweedler, J. V., May 8 2012, In: Lab on a chip. 12, 11, p. 2037-2045 9 p.Research output: Contribution to journal › Article › peer-review
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2020
Quantitative Characterization of the Neuropeptide Level Changes in Dorsal Horn and Dorsal Root Ganglia Regions of the Murine Itch Models
Tillmaand, E. G., Anapindi, K. D. B., De La Toba, E. A., Guo, C. J., Krebs, J., Lenhart, A. E., Liu, Q. & Sweedler, J. V., Mar 6 2020, In: Journal of Proteome Research. 19, 3, p. 1248-1257 10 p.Research output: Contribution to journal › Article › peer-review
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2014
Chemistry and the BRAIN initiative
Andrews, A. M., Schepartz, A., Sweedler, J. V. & Weiss, P. S., Jan 8 2014, In: Journal of the American Chemical Society. 136, 1, p. 1-2 2 p.Research output: Contribution to journal › Editorial › peer-review
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2012
Peptidomic analyses of mouse astrocytic cell lines and rat primary cultured astrocytes
Yin, P., Knolhoff, A. M., Rosenberg, H. J., Millet, L. J., Gillette, M. U. & Sweedler, J. V., Aug 3 2012, In: Journal of Proteome Research. 11, 8, p. 3965-3973 9 p.Research output: Contribution to journal › Article › peer-review
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2020
D-Alanine: Distribution, origin, physiological relevance, and implications in disease
Lee, C. J., Qiu, T. A. & Sweedler, J. V., Nov 2020, In: Biochimica et Biophysica Acta - Proteins and Proteomics. 1868, 11, 140482.Research output: Contribution to journal › Review article › peer-review
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2012
Evaluation of database search programs for accurate detection of neuropeptides in tandem mass spectrometry experiments
Akhtar, M. N., Southey, B. R., Andrén, P. E., Sweedler, J. V. & Rodriguez-Zas, S. L., Dec 7 2012, In: Journal of Proteome Research. 11, 12, p. 6044-6055 12 p.Research output: Contribution to journal › Article › peer-review
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2020
Confronting Racism in Chemistry Journals
Burrows, C. J., Huang, J., Wang, S., Kim, H. J., Meyer, G. J., Schanze, K., Lee, T. R., Lutkenhaus, J. L., Kaplan, D., Jones, C., Bertozzi, C., Kiessling, L., Mulcahy, M. B., Lindsley, C. W., Finn, M. G., Blum, J. D., Kamat, P., Choi, W., Snyder, S., Aldrich, C. C. & 52 others, , Jul 28 2020, In: ACS Nano. 14, 7, p. 7675-7677 3 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
2014
Application of capillary electrophoresis for the early diagnosis of cancer
Yang, Z. & Sweedler, J. V., Jul 2014, In: Analytical and bioanalytical chemistry. 406, 17, p. 4013-4031 19 p.Research output: Contribution to journal › Review article › peer-review
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2020
An Editor's Reflections on an Unusual Year
Sweedler, J. V., Dec 15 2020, In: Analytical Chemistry. 92, 24, p. 15686-15687 2 p.Research output: Contribution to journal › Editorial › peer-review
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2012
Circadian rhythm of redox state regulates excitability in suprachiasmatic nucleus neurons
Wang, T. A., Yu, Y. V., Govindaiah, G., Ye, X., Artinian, L., Coleman, T. P., Sweedler, J. V., Cox, C. L. & Gillette, M. U., Aug 17 2012, In: Science. 337, 6096, p. 839-842 4 p.Research output: Contribution to journal › Article › peer-review
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2014
Small-Volume Analysis of Cell-Cell Signaling Molecules in the Brain
Romanova, E. V., Aerts, J. T., Croushore, C. A. & Sweedler, J. V., Jan 2014, In: Neuropsychopharmacology. 39, 1, p. 50-64 15 p.Research output: Contribution to journal › Review article › peer-review
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2020
Confronting racism in chemistry journals
Burrows, C. J., Huang, J., Wang, S., Kim, H. J., Meyer, G. J., Schanze, K., Lee, T. R., Lutkenhaus, J. L., Kaplan, D., Jones, C., Bertozzi, C., Kiessling, L., Mulcahy, M. B., Lindsley, C. W., Finn, M. G., Blum, J. D., Kamat, P., Choi, W., Snyder, S., Aldrich, C. C. & 52 others, , Jul 10 2020, In: ACS Energy Letters. 5, 7Research output: Contribution to journal › Editorial › peer-review
Open Access -
Confronting racism in chemistry journals
Burrows, C. J., Huang, J., Wang, S., Kim, H. J., Meyer, G. J., Schanze, K., Randall Lee, T., Lutkenhaus, J. L., Kaplan, D., Jones, C., Bertozzi, C., Kiessling, L., Mulcahy, M. B., Lindsley, C. W., Finn, M. G., Blum, J. D., Kamat, P., Choi, W., Snyder, S., Aldrich, C. C. & 52 others, , Jul 16 2020, In: ACS Earth and Space Chemistry. 4, 7, p. 961-963 3 p.Research output: Contribution to journal › Editorial › peer-review
Open Access -
Confronting racism in chemistry journals
Burrows, C. J., Huang, J., Wang, S., Kim, H. J., Meyer, G. J., Schanze, K., Randall Lee, T., Lutkenhaus, J. L., Kaplan, D., Jones, C., Bertozzi, C., Kiessling, L., Mulcahy, M. B., Lindsley, C. W., Finn, M. G., Blum, J. D., Kamat, P., Choi, W., Snyder, S., Aldrich, C. C. & 52 others, , Jul 7 2020, In: Analytical Chemistry. 92, 13, p. 8625-8627 3 p.Research output: Contribution to journal › Editorial › peer-review
Open Access -
The Analytical Chemistry Virtual Issue Featuring Our Advisory Boards
Sweedler, J. V., Dec 15 2020, In: Analytical Chemistry. 92, 24, p. 15685 1 p.Research output: Contribution to journal › Editorial › peer-review
Open Access -
2014
The Past, Present, and Future of Analytical Chemistry According to Chris Enke
Sweedler, J. V., Oct 7 2014, In: Analytical chemistry. 86, 19, 1 p.Research output: Contribution to journal › Editorial › peer-review
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2013
Celebrating the 75th anniversary of the ACS division of analytical chemistry: A special collection of the most highly cited analytical chemistry papers published between 1938 and 2012
Larive, C. K. & Sweedler, J. V., May 7 2013, In: Analytical chemistry. 85, 9, p. 4201-4202 2 p.Research output: Contribution to journal › Editorial › peer-review
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2012
Professional Editors or Scientist Editors? Both perspectives have value.
Sweedler, J. V., Mar 6 2012, In: Analytical chemistry. 84, 5, 1 p.Research output: Contribution to journal › Editorial › peer-review
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2014
MALDI-guided SIMS: Multiscale imaging of metabolites in bacterial biofilms
Lanni, E. J., Masyuko, R. N., Driscoll, C. M., Aerts, J. T., Shrout, J. D., Bohn, P. W. & Sweedler, J. V., Sep 1 2014, In: Analytical Chemistry. 86, 18, p. 9139-9145 7 p.Research output: Contribution to journal › Article › peer-review
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2012
Now it is a highlight, not an acceleration
Sweedler, J. V., Sep 4 2012, In: Analytical chemistry. 84, 17, 1 p.Research output: Contribution to journal › Editorial › peer-review
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Are we growing more picky, more careless or simply under more pressure?
Sweedler, J. V., Aug 7 2012, In: Analytical chemistry. 84, 15, 1 p.Research output: Contribution to journal › Editorial › peer-review
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2014
The analytical chemistry advisory boards
Sweedler, J. V., Jul 1 2014, In: Analytical chemistry. 86, 13, 1 p.Research output: Contribution to journal › Editorial › peer-review
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Writing a review
Sweedler, J. V., Oct 16 2014, In: Analytical chemistry. 86, 21, 1 p.Research output: Contribution to journal › Editorial › peer-review
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2013
Tips on writing a postdoctoral request letter
Sweedler, J. V., Aug 6 2013, In: Analytical chemistry. 85, 15, 1 p.Research output: Contribution to journal › Editorial › peer-review
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2014
Too busy to review?
Sweedler, J. V., Jun 3 2014, In: Analytical chemistry. 86, 11, 1 p.Research output: Contribution to journal › Editorial › peer-review
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2020
Single-Cell Classification Using Mass Spectrometry through Interpretable Machine Learning
Xie, Y. R., Castro, D. C., Bell, S. E., Rubakhin, S. & Sweedler, J. V., Jul 7 2020, In: Analytical chemistry. 92, 13, p. 9338-9347 10 p.Research output: Contribution to journal › Article › peer-review
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2012
Two unrelated items to avoid, one for me and one for you
Sweedler, J. V., Jun 5 2012, In: Analytical chemistry. 84, 11, p. 4635-4636 2 p.Research output: Contribution to journal › Editorial › peer-review
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2020
Your Manuscript's Incredible Journey
Sweedler, J. V., Sep 15 2020, In: Analytical chemistry. 92, 18, p. 12099-12100 2 p.Research output: Contribution to journal › Editorial › peer-review
Open Access -
Confronting Racism in Chemistry Journals
Burrows, C. J., Huang, J., Wang, S., Kim, H. J., Meyer, G. J., Schanze, K., Lee, T. R., Lutkenhaus, J. L., Kaplan, D., Jones, C., Bertozzi, C., Kiessling, L., Mulcahy, M. B., Lindsley, C. W., Finn, M. G., Blum, J. D., Kamat, P., Choi, W., Snyder, S., Aldrich, C. C. & 52 others, , Jul 21 2020, In: ACS Macro Letters. 9, 7, p. 1004-1006 3 p.Research output: Contribution to journal › Editorial › peer-review
Open Access -
2014
Accurate assignment of significance to neuropeptide identifications using monte carlo K-permuted decoy databases
Akhtar, M. N., Southey, B. R., Andrén, P. E., Sweedler, J. V. & Rodriguez-Zas, S. L., Oct 17 2014, In: PloS one. 9, 10, e111112.Research output: Contribution to journal › Article › peer-review
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Editorial
Suzuki, K., Teramae, N., Hattori, S., Copsey, M. & Sweedler, J. V., Jan 2014, In: Analytical Sciences. 30, 1, p. 1-5 5 p.Research output: Contribution to journal › Editorial › peer-review
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2020
Confronting racism in chemistry journals
Burrows, C. J., Huang, J., Wang, S., Kim, H. J., Meyer, G. J., Schanze, K., Lee, T. R., Lutkenhaus, J. L., Kaplan, D., Jones, C., Bertozzi, C., Kiessling, L., Mulcahy, M. B., Lindsley, C. W., Finn, M. G., Blum, J. D., Kamat, P., Choi, W., Snyder, S., Aldrich, C. C. & 52 others, , Jul 14 2020, In: Environmental Science and Technology Letters. 7, 7, p. 447-449 3 p.Research output: Contribution to journal › Editorial › peer-review
Open Access -
2013
Discovery of new enzymes and metabolic pathways by using structure and genome context
Zhao, S., Kumar, R., Sakai, A., Vetting, M. W., Wood, B. M. K., Brown, S., Bonanno, J. B., Hillerich, B. S., Seidel, R. D., Babbitt, P. C., Almo, S. C., Sweedler, J. V., Gerlt, J. A., Cronan, J. E. & Jacobson, M. P., 2013, In: Nature. 502, 7473, p. 698-702 5 p.Research output: Contribution to journal › Article › peer-review
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2012
An enhanced protein crosslink identification strategy using CID-cleavable chemical crosslinkers and LC/MS n analysis
Liu, F., Wu, C., Sweedler, J. V. & Goshe, M. B., Feb 2012, In: Proteomics. 12, 3, p. 401-405 5 p.Research output: Contribution to journal › Comment/debate › peer-review
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2020
Update to Our Reader, Reviewer, and Author Communities-April 2020
Burrows, C. J., Wang, S., Kim, H. J., Meyer, G. J., Schanze, K., Lee, T. R., Lutkenhaus, J. L., Kaplan, D., Jones, C., Bertozzi, C., Kiessling, L., Mulcahy, M. B., Lindsley, C. W., Finn, M. G., Blum, J. D., Kamat, P., Aldrich, C. C., Rowan, S., Liotta, D., Weiss, P. S. & 50 others, , Jun 12 2020, In: ACS Pharmacology and Translational Science. 3, 3, p. 455-456 2 p.Research output: Contribution to journal › Editorial › peer-review
Open Access -
2012
Targeted single-cell microchemical analysis: MS-based peptidomics of individual paraformaldehyde-fixed and immunolabeled neurons
Neupert, S., Rubakhin, S. S. & Sweedler, J. V., Aug 24 2012, In: Chemistry and Biology. 19, 8, p. 1010-1019 10 p.Research output: Contribution to journal › Article › peer-review
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2020
Confronting racism in chemistry journals
Burrows, C. J., Huang, J., Wang, S., Kim, H. J., Meyer, G. J., Schanze, K., Lee, T. R., Lutkenhaus, J. L., Kaplan, D., Jones, C., Bertozzi, C., Kiessling, L., Mulcahy, M. B., Lindsley, C. W., Finn, M. G., Blum, J. D., Kamat, P., Choi, W., Snyder, S., Aldrich, C. C. & 52 others, , Jul 2 2020, In: ACS Catalysis. 10, 13, p. 7307-7309 3 p.Research output: Contribution to journal › Editorial › peer-review
Open Access -
2014
The ctenophore genome and the evolutionary origins of neural systems
Moroz, L. L., Kocot, K. M., Citarella, M. R., Dosung, S., Norekian, T. P., Povolotskaya, I. S., Grigorenko, A. P., Dailey, C., Berezikov, E., Buckley, K. M., Ptitsyn, A., Reshetov, D., Mukherjee, K., Moroz, T. P., Bobkova, Y., Yu, F., Kapitonov, V. V., Jurka, J., Bobkov, Y. V., Swore, J. J. & 16 others, , 2014, In: Nature. 510, 7503, p. 109-114 6 p.Research output: Contribution to journal › Article › peer-review
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2020
Accelerating Fourier Transform-Ion Cyclotron Resonance Mass Spectrometry Imaging Using a Subspace Approach
Xie, Y. R., Castro, D. C., Lam, F. & Sweedler, J. V., Nov 4 2020, In: Journal of the American Society for Mass Spectrometry. 31, 11, p. 2338-2347 10 p.Research output: Contribution to journal › Article › peer-review