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• 2013

  Multifactorial understanding of ion abundance in tandem mass spectrometry experiments

  Fazal, Z., Southey, B. R., Sweedler, J. V. & Rodriguez-Zas, S. L., 2013, In: Journal of Proteomics and Bioinformatics. 6, 2, p. 23-29 7 p.

  Research output: Contribution to journal › Article › peer-review

  • Mass spectrometry
  • Tandem Mass Spectrometry
  • Ions
  • Peptides
  • Experiments
• 2014

  Chemistry and the BRAIN initiative

  Andrews, A. M., Schepartz, A., Sweedler, J. V. & Weiss, P. S., Jan 8 2014, In: Journal of the American Chemical Society. 136, 1, p. 1-2 2 p.

  Research output: Contribution to journal › Editorial › peer-review
• 2018

  Expired Epinephrine Maintains Chemical Concentration and Sterility

  Weir, W. B., Fred, L. Y., Pike, M., Rubakhin, S. S., Ludwig, T. J., Shar, A. M., Zhu, L., Frederick, A., Uzoaru, I., Wang, L. & Sweedler, J. V., Jul 4 2018, In: Prehospital Emergency Care. 22, 4, p. 414-418 5 p.

  Research output: Contribution to journal › Article › peer-review

  • Infertility
  • Epinephrine
  • Syringes
  • Emergency Medical Services
  • Magnetic Resonance Spectroscopy
• 2013

  Stimulation and release from neurons via a dual capillary collection device interfaced to mass spectrometry

  Fan, Y., Lee, C. Y., Rubakhin, S. S. & Sweedler, J. V., Nov 7 2013, In: Analyst. 138, 21, p. 6337-6346 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Neuropeptides
  • Peptides
  • Mass spectrometry
  • Neurons
  • Mass Spectrometry
• 2018

  Exploring the Sea Urchin Neuropeptide Landscape by Mass Spectrometry

  Monroe, E. B., Annangudi, S. P., Wadhams, A. A., Richmond, T. A., Yang, N., Southey, B. R., Romanova, E. V., Schoofs, L., Baggerman, G. & Sweedler, J. V., May 1 2018, In: Journal of the American Society for Mass Spectrometry. 29, 5, p. 923-934 12 p.

  Research output: Contribution to journal › Article › peer-review

  • Sea Urchins
  • Mass spectrometry
  • Neuropeptides
  • Mass Spectrometry
  • Echinodermata
• 2012

  D-Aspartate acts as a signaling molecule in nervous and neuroendocrine systems

  Ota, N., Shi, T. & Sweedler, J. V., Nov 2012, In: Amino Acids. 43, 5, p. 1873-1886 14 p.

  Research output: Contribution to journal › Review article › peer-review

  • D-Aspartic Acid
  • Neurosecretory Systems
  • Neurology
  • Molecules
  • Nervous System

• 1-methylthio-d-xylulose 5-phosphate methylsulfurylase: A novel route to 1-deoxy-d-xylulose 5-phosphate in Rhodospirillum rubrum

  Warlick, B. P., Evans, B. S., Erb, T. J., Ramagopal, U. A., Sriram, J., Imker, H. J., Sauder, J. M., Bonanno, J. B., Burley, S. K., Tabita, F. R., Almo, S. C., Sweedler, J. S. & Gerlt, J. A., Oct 23 2012, In: Biochemistry. 51, 42, p. 8324-8326 3 p.

  Research output: Contribution to journal › Article › peer-review

  • xylulose-5-phosphate
  • Rhodospirillum rubrum
  • ribose 1-phosphate
  • dimethyl disulfide
  • 5'-methylthioadenosine
• 2019

  Spatiotemporal dynamics of molecular messaging in bacterial co-cultures studied by multimodal chemical imaging

  Cao, T., Morales-Soto, N., Jia, J., Baig, N. F., Dunham, S. J. B., Ellis, J., Sweedler, J. V., Shrout, J. D. & Bohn, P. W., 2019, Photonic Diagnosis and Treatment of Infections and Inflammatory Diseases II. Dai, T., Popp, J. & Wu, M. X. (eds.). SPIE, 108630A. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 10863).

  Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

  • Co-culture
  • Quorum Sensing
  • Imaging
  • Microscopic examination
  • Imaging techniques

• Lipid Heterogeneity between Astrocytes and Neurons Revealed by Single-Cell MALDI-MS Combined with Immunocytochemical Classification

  Neumann, E. K., Comi, T. J., Rubakhin, S. S. & Sweedler, J. V., Apr 23 2019, In: Angewandte Chemie - International Edition. 58, 18, p. 5910-5914 5 p.

  Research output: Contribution to journal › Article › peer-review

  • Astrocytes
  • Lipids
  • Ionization
  • Mass spectrometry
  • Desorption
• 2014

  Fibrinogen α-chain-derived peptide is upregulated in hippocampus of rats exposed to acute morphine injection and spontaneous alternation testing

  Maki, A. E., Morris, K. A., Catherman, K., Chen, X., Hatcher, N. G., Gold, P. E. & Sweedler, J. V., Jun 2014, In: Pharmacology Research and Perspectives. 2, 3, e00037.

  Research output: Contribution to journal › Article › peer-review

  • Fibrinopeptide A
  • Fibrinogen
  • Morphine
  • Hippocampus
  • Peptides
• 2012

  Comparative peptidomics analysis of neural adaptations in rats repeatedly exposed to amphetamine

  Romanova, E. V., Lee, J. E., Kelleher, N. L., Sweedler, J. V. & Gulley, J. M., Nov 2012, In: Journal of Neurochemistry. 123, 2, p. 276-287 12 p.

  Research output: Contribution to journal › Article › peer-review

  • Rats
  • Amphetamine
  • Mass spectrometry
  • Peptides
  • Liquid chromatography
• 2019

  Aplysia allatotropin-related peptide and its newly identified D-amino acid-containing epimer both activate a receptor and a neuronal target

  Checco, J. W., Zhang, G., Yuan, W. D., Le, Z. W., Jing, J. & Sweedler, J. V., Oct 26 2019, In: Journal of Biological Chemistry. 293, 43, p. 16862-16873 12 p.

  Research output: Contribution to journal › Article › peer-review

  • allatotropin
  • Aplysia
  • Amino Acids
  • Peptides
  • Isomerization
• 2013

  Discovery of new enzymes and metabolic pathways by using structure and genome context

  Zhao, S., Kumar, R., Sakai, A., Vetting, M. W., Wood, B. M. K., Brown, S., Bonanno, J. B., Hillerich, B. S., Seidel, R. D., Babbitt, P. C., Almo, S. C., Sweedler, J. V., Gerlt, J. A., Cronan, J. E. & Jacobson, M. P., 2013, In: Nature. 502, 7473, p. 698-702 5 p.

  Research output: Contribution to journal › Article › peer-review

  • stachydrine
  • Metabolic Networks and Pathways
  • Substrate Specificity
  • Multigene Family
  • Genome
• 2014

  Biomolecular imaging with a C₆₀-SIMS/MALDI dual ion source hybrid mass spectrometer: Instrumentation, matrix enhancement, and single cell analysis

  Lanni, E. J., Dunham, S. J. B., Nemes, P., Rubakhin, S. S. & Sweedler, J. V., Nov 2014, In: Journal of the American Society for Mass Spectrometry. 25, 11, p. 1897-1907 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Ion sources
  • Secondary ion mass spectrometry
  • Mass spectrometers
  • Biomolecules
  • Single-Cell Analysis
• 2018

  Rapid Screening of Lanthipeptide Analogs via In-Colony Removal of Leader Peptides in Escherichia coli

  Si, T., Tian, Q., Min, Y., Zhang, L., Sweedler, J. V., Van Der Donk, W. A. & Zhao, H., Sep 26 2018, In: Journal of the American Chemical Society. 140, 38, p. 11884-11888 5 p.

  Research output: Contribution to journal › Article › peer-review

  • Protein Sorting Signals
  • Escherichia coli
  • peptide
  • Screening
  • screening
• 2012

  Targeted single-cell microchemical analysis: MS-based peptidomics of individual paraformaldehyde-fixed and immunolabeled neurons

  Neupert, S., Rubakhin, S. S. & Sweedler, J. V., Aug 24 2012, In: Chemistry and Biology. 19, 8, p. 1010-1019 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Single-Cell Analysis
  • paraform
  • Mass spectrometry
  • Neuropeptides
  • Molecules
• 2018

  Bioinformatics for prohormone and neuropeptide discovery

  Southey, B. R., Romanova, E. V., Rodriguez-Zas, S. L. & Sweedler, J. V., 2018, Methods in Molecular Biology. Humana Press Inc., p. 71-96 26 p. (Methods in Molecular Biology; vol. 1719).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Neuropeptides
  • Computational Biology
  • Peptide Hormones
  • Post Translational Protein Processing
  • Proteomics
• 2012

  First survey and functional annotation of prohormone and convertase genes in the pig

  Porter, K. I., Southey, B. R., Sweedler, J. V. & Rodriguez-Zas, S. L., Nov 15 2012, In: BMC genomics. 13, 1, 582.

  Research output: Contribution to journal › Article › peer-review

  • Proprotein Convertases
  • Swine
  • Urocortins
  • Neuropeptides
  • Genes
• 2013

  Qualitative and quantitative metabolomic investigation of single neurons by capillary electrophoresis electrospray ionization mass spectrometry

  Nemes, P., Rubakhin, S. S., Aerts, J. T. & Sweedler, J. V., Apr 2013, In: Nature Protocols. 8, 4, p. 783-799 17 p.

  Research output: Contribution to journal › Article › peer-review

  • Electrospray ionization
  • Capillary electrophoresis
  • Metabolomics
  • Electrospray Ionization Mass Spectrometry
  • Capillary Electrophoresis

• Visualizing the proteome: Mapping protein changes in disease states with mass spectrometry imaging

  Lanni, E. J., Rubakhin, S. & Sweedler, J. V., Mar 2013, In: Journal of Neurochemistry. 124, 5, p. 581-583 3 p.

  Research output: Contribution to journal › Review article › peer-review

• New Mass Spectrometric Approaches for Uncovering Neuropeptides

  Hou, X. & Sweedler, J. V., Aug 29 2013, Handbook of Biologically Active Peptides. Elsevier Inc., p. 1749-1756 8 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter
• 2018

  Single Synaptic Observation of Cholinergic Neurotransmission on Living Neurons: Concentration and Dynamics

  Shen, M., Qu, Z., Deslaurier, J., Welle, T. M., Sweedler, J. V. & Chen, R., Jun 27 2018, In: Journal of the American Chemical Society. 140, 25, p. 7764-7768 5 p.

  Research output: Contribution to journal › Article › peer-review

  • in situ measurement
  • Synaptic Transmission
  • Cholinergic Agents
  • Acetylcholine
  • Neurons

• A high spatiotemporal study of somatic exocytosis with scanning electrochemical microscopy and nanoITIES electrodes

  Welle, T. M., Alanis, K., Colombo, M. L., Sweedler, J. V. & Shen, M., 2018, In: Chemical Science. 9, 22, p. 4937-4941 5 p.

  Research output: Contribution to journal › Article › peer-review

  • Cellular radio systems
  • Carisoprodol
  • Microscopic examination
  • Acetylcholine
  • Neurotransmitter Agents
• 2014

  The ctenophore genome and the evolutionary origins of neural systems

  Moroz, L. L., Kocot, K. M., Citarella, M. R., Dosung, S., Norekian, T. P., Povolotskaya, I. S., Grigorenko, A. P., Dailey, C., Berezikov, E., Buckley, K. M., Ptitsyn, A., Reshetov, D., Mukherjee, K., Moroz, T. P., Bobkova, Y., Yu, F., Kapitonov, V. V., Jurka, J., Bobkov, Y. V., Swore, J. J. & 16 others, Girardo, D. O., Fodor, A., Gusev, F., Sanford, R., Bruders, R., Kittler, E., Mills, C. E., Rast, J. P., Derelle, R., Solovyev, V. V., Kondrashov, F. A., Swalla, B. J., Sweedler, J. V., Rogaev, E. I., Halanych, K. M. & Kohn, A. B., 2014, In: Nature. 510, 7503, p. 109-114 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Ctenophora
  • Genome
  • Ribes
  • Genes
  • Animals
• 2018

  Conformational investigation of the structure-activity relationship of GdFFD and its analogues on an achatin-like neuropeptide receptor of: Aplysia californica involved in the feeding circuit

  Do, T. D., Checco, J. W., Tro, M., Shea, J. E., Bowers, M. T. & Sweedler, J. V., 2018, In: Physical Chemistry Chemical Physics. 20, 34, p. 22047-22057 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Neuropeptide Receptors
  • Conformations
  • amino acids
  • peptides
  • analogs
• 2013

  Automated method for analysis of tryptophan and tyrosine metabolites using capillary electrophoresis with native fluorescence detection

  Dailey, C. A., Garnier, N., Rubakhin, S. S. & Sweedler, J. V., Mar 2013, In: Analytical and bioanalytical chemistry. 405, 8, p. 2451-2459 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Capillary electrophoresis
  • Metabolites
  • Capillary Electrophoresis
  • Fluorescence
  • Tryptophan

• Quantitation of endogenous peptides using mass spectrometry based methods

  Romanova, E. V., Dowd, S. E. & Sweedler, J. V., Oct 2013, In: Current Opinion in Chemical Biology. 17, 5, p. 801-808 8 p.

  Research output: Contribution to journal › Review article › peer-review

  • Mass spectrometry
  • Mass Spectrometry
  • Peptides
  • Molecular interactions
  • Industrial Development
• 2012

  Sampling techniques for single-cell electrophoresis

  Cecala, C. & Sweedler, J. V., Jul 7 2012, In: Analyst. 137, 13, p. 2922-2929 8 p.

  Research output: Contribution to journal › Review article › peer-review

  • Electrophoresis
  • sampling technique
  • electrokinesis
  • Sampling
  • Fluorescence

• Urotensin II in Invertebrates: From Structure to Function in Aplysia californica

  Romanova, E. V., Sasaki, K., Alexeeva, V., Vilim, F. S., Jing, J., Richmond, T. A., Weiss, K. R. & Sweedler, J. V., Nov 8 2012, In: PloS one. 7, 11, e48764.

  Research output: Contribution to journal › Article › peer-review

  • Invertebrates
  • urotensin II
  • Aplysia californica
  • Aplysia
  • invertebrates

• Analyses of pig genomes provide insight into porcine demography and evolution

  Groenen, M. A. M., Archibald, A. L., Uenishi, H., Tuggle, C. K., Takeuchi, Y., Rothschild, M. F., Rogel-Gaillard, C., Park, C., Milan, D., Megens, H. J., Li, S., Larkin, D. M., Kim, H., Frantz, L. A. F., Caccamo, M., Ahn, H., Aken, B. L., Anselmo, A., Anthon, C., Auvil, L. & 116 others, Badaoui, B., Beattie, C. W., Bendixen, C., Berman, D., Blecha, F., Blomberg, J., Bolund, L., Bosse, M., Botti, S., Bujie, Z., Bystrom, M., Capitanu, B., Carvalho-Silva, D., Chardon, P., Chen, C., Cheng, R., Choi, S. H., Chow, W., Clark, R. C., Clee, C., Crooijmans, R. P. M. A., Dawson, H. D., Dehais, P., De Sapio, F., Dibbits, B., Drou, N., Du, Z. Q., Eversole, K., Fadista, J., Fairley, S., Faraut, T., Faulkner, G. J., Fowler, K. E., Fredholm, M., Fritz, E., Gilbert, J. G. R., Giuffra, E., Gorodkin, J., Griffin, D. K., Harrow, J. L., Hayward, A., Howe, K., Hu, Z. L., Humphray, S. J., Hunt, T., Hornshoøj, H., Jeon, J. T., Jern, P., Jones, M., Jurka, J., Kanamori, H., Kapetanovic, R., Kim, J., Kim, J. H., Kim, K. W., Kim, T. H., Larson, G., Lee, K., Lee, K. T., Leggett, R., Lewin, H. A., Li, Y., Liu, W., Loveland, J. E., Lu, Y., Lunney, J. K., Ma, J., Madsen, O., Mann, K., Matthews, L., McLaren, S., Morozumi, T., Murtaugh, M. P., Narayan, J., Nguyen, D. T., Ni, P., Oh, S. J., Onteru, S., Panitz, F., Park, E. W., Park, H. S., Pascal, G., Paudel, Y., Perez-Enciso, M., Ramirez-Gonzalez, R., Reecy, J. M., Rodriguez-Zas, S., Rohrer, G. A., Rund, L., Sang, Y., Schachtschneider, K., Schraiber, J. G., Schwartz, J., Scobie, L., Scott, C., Searle, S., Servin, B., Southey, B. R., Sperber, G., Stadler, P., Sweedler, J. V., Tafer, H., Thomsen, B., Wali, R., Wang, J., Wang, J., White, S., Xu, X., Yerle, M., Zhang, G., Zhang, J., Zhang, J., Zhao, S., Rogers, J., Churcher, C. & Schook, L. B., Nov 15 2012, In: Nature. 491, 7424, p. 393-398 6 p.

  Research output: Contribution to journal › Article › peer-review

  • Sus scrofa
  • Swine
  • Genome
  • Demography
  • Smell
• 2018

  Exploring Exercise- and Context-Induced Peptide Changes in Mice by Quantitative Mass Spectrometry

  Dowd, S. E., Mustroph, M. L., Romanova, E. V., Southey, B. R., Pinardo, H., Rhodes, J. S. & Sweedler, J. V., Oct 24 2018, In: ACS Omega. 3, 10, p. 13817-13827 11 p.

  Research output: Contribution to journal › Article › peer-review

  • Peptides
  • Mass spectrometry
  • Cocaine
  • Animals
  • Electrospray ionization
• 2013

  Pittcon: Still vibrant after more than 60 years

  Sweedler, J. V., Mar 5 2013, In: Analytical chemistry. 85, 5, 1 p.

  Research output: Contribution to journal › Editorial › peer-review
• 2019

  Is the Power List a Representative List?

  Sweedler, J. V., Dec 3 2019, In: Analytical Chemistry. 91, 23, p. 14783 1 p.

  Research output: Contribution to journal › Editorial › peer-review

  Open Access
• 2018

  Science Research - Looking in the Mirror

  Sweedler, J. V., Nov 6 2018, In: Analytical Chemistry. 90, 21, p. 12323-12324 2 p.

  Research output: Contribution to journal › Editorial › peer-review
• 2019

  Avoiding a Retraction: Some Simple Guidelines on What NOT to Do

  Sweedler, J. V., Aug 6 2019, In: Analytical chemistry. 91, 15, p. 9331-9332 2 p.

  Research output: Contribution to journal › Editorial › peer-review
• 2012

  Don't grow your article too long: We do have length guidelines

  Sweedler, J. V., Jul 3 2012, In: Analytical chemistry. 84, 13, 1 p.

  Research output: Contribution to journal › Editorial › peer-review
• 2019

  Salami Publications and Duplicate Submissions: Put Them on Your List of Things to Avoid

  Sweedler, J. V., Mar 5 2019, In: Analytical chemistry. 91, 5, p. 3177-3178 2 p.

  Research output: Contribution to journal › Editorial › peer-review
• 2014

  Too busy to review?

  Sweedler, J. V., Jun 3 2014, In: Analytical chemistry. 86, 11, 1 p.

  Research output: Contribution to journal › Editorial › peer-review
• 2013

  Reflections from my first year

  Sweedler, J. V., Jan 2 2013, In: Analytical chemistry. 85, 1, 1 p.

  Research output: Contribution to journal › Editorial › peer-review
• 2018

  Multimodal Chemical Analysis of the Brain by High Mass Resolution Mass Spectrometry and Infrared Spectroscopic Imaging

  Neumann, E. K., Comi, T. J., Spegazzini, N., Mitchell, J. W., Rubakhin, S. S., Gillette, M. U., Bhargava, R. & Sweedler, J. V., Oct 2 2018, In: Analytical Chemistry. 90, 19, p. 11572-11580 9 p.

  Research output: Contribution to journal › Article › peer-review

  • Mass spectrometry
  • Infrared radiation
  • Brain
  • Imaging techniques
  • Chemical analysis
• 2013

  Buyer beware! Think twice when selecting a journal (or attending a conference)

  Sweedler, J. V., Nov 5 2013, In: Analytical chemistry. 85, 21, 1 p.

  Research output: Contribution to journal › Editorial › peer-review
• 2012

  Filling Royce's shoes

  Sweedler, J., Jan 3 2012, In: Analytical chemistry. 84, 1, 1 p.

  Research output: Contribution to journal › Editorial › peer-review
• 2019

  Advancing the Fields of Measurement Science with Partnerships and Awards

  Sweedler, J. V., Apr 2 2019, In: Analytical chemistry. 91, 7, 1 p.

  Research output: Contribution to journal › Editorial › peer-review

• Lipid Analysis of 30 000 Individual Rodent Cerebellar Cells Using High-Resolution Mass Spectrometry

  Neumann, E. K., Ellis, J. F., Triplett, A. E., Rubakhin, S. S. & Sweedler, J. V., Jan 1 2019, In: Analytical Chemistry.

  Research output: Contribution to journal › Article › peer-review

  • Mass spectrometry
  • Lipids
  • Cyclotron resonance
  • Ionization
  • Rats
• 2018

  Who Are Your Coauthors? Make Sure to Follow Appropriate Practices

  Sweedler, J. V., Mar 6 2018, In: Analytical Chemistry. 90, 5, p. 2977-2978 2 p.

  Research output: Contribution to journal › Editorial › peer-review
• 2013

  Details matter, and so do statistics

  Sweedler, J. V., Jun 4 2013, In: Analytical chemistry. 85, 11, 1 p.

  Research output: Contribution to journal › Editorial › peer-review
• 2014

  Publish only your original research

  Sweedler, J. V., Apr 1 2014, In: Analytical chemistry. 86, 7, 1 p.

  Research output: Contribution to journal › Editorial › peer-review
• 2018

  Quantitative SIMS Imaging of Agar-Based Microbial Communities

  Dunham, S. J. B., Ellis, J. F., Baig, N. F., Morales-Soto, N., Cao, T., Shrout, J. D., Bohn, P. W. & Sweedler, J. V., May 1 2018, In: Analytical Chemistry. 90, 9, p. 5654-5663 10 p.

  Research output: Contribution to journal › Article › peer-review

  • Secondary ion mass spectrometry
  • Agar
  • Imaging techniques
  • Biofilms
  • Ions

• Where Is the Data?

  Sweedler, J. V., Aug 7 2018, In: Analytical Chemistry. 90, 15, p. 8721 1 p.

  Research output: Contribution to journal › Editorial › peer-review
• 2019

  The Evolving World of Scientific Publications: From Unethical Behaviors to New Mandates from Funding Agencies

  Sweedler, J. V., Feb 5 2019, In: Analytical chemistry. 91, 3, p. 1673-1674 2 p.

  Research output: Contribution to journal › Editorial › peer-review