Find Research Outputs — University of Illinois at Urbana-Champaign

2018

Single Cell Neurometabolomics

Qi, M., Philip, M. C., Yang, N. & Sweedler, J. V., Jan 17 2018, In: ACS Chemical Neuroscience. 9, 1, p. 40-50 11 p.

Research output: Contribution to journal › Review article › peer-review

2012

1-methylthio-d-xylulose 5-phosphate methylsulfurylase: A novel route to 1-deoxy-d-xylulose 5-phosphate in Rhodospirillum rubrum

Warlick, B. P., Evans, B. S., Erb, T. J., Ramagopal, U. A., Sriram, J., Imker, H. J., Sauder, J. M., Bonanno, J. B., Burley, S. K., Tabita, F. R., Almo, S. C., Sweedler, J. S. & Gerlt, J. A., Oct 23 2012, In: Biochemistry. 51, 42, p. 8324-8326 3 p.

Research output: Contribution to journal › Article › peer-review

2018

Neuropeptidomics of the Rat Habenular Nuclei

Yang, N., Anapindi, K. D. B., Rubakhin, S. S., Wei, P., Yu, Q., Li, L., Kenny, P. J. & Sweedler, J. V., Apr 6 2018, In: Journal of Proteome Research. 17, 4, p. 1463-1473 11 p.

Research output: Contribution to journal › Article › peer-review

2012

Now it is a highlight, not an acceleration

Sweedler, J. V., Sep 4 2012, In: Analytical chemistry. 84, 17, 1 p.

Research output: Contribution to journal › Editorial › peer-review

2020

Strange Advice for Authors: Submit Your Manuscript with a Short Title on a Weekday

Sweedler, J. V., Feb 4 2020, In: Analytical Chemistry. 92, 3, p. 2351-2352 2 p.

Research output: Contribution to journal › Editorial › peer-review

Open Access

2016

The Midwest Universities Analytical Chemistry Conference: Still the Midwest's Secret Weapon?

Sweedler, J. V., Nov 1 2016, In: Analytical Chemistry. 88, 21, p. 10337 1 p.

Research output: Contribution to journal › Editorial › peer-review

2017

Science Communication: A Science Not an Art

Sweedler, J. V., Mar 7 2017, In: Analytical Chemistry. 89, 5, p. 2645 1 p.

Research output: Contribution to journal › Editorial › peer-review

2012

Don't grow your article too long: We do have length guidelines

Sweedler, J. V., Jul 3 2012, In: Analytical chemistry. 84, 13, 1 p.

Research output: Contribution to journal › Editorial › peer-review

2017

Metrics to Evaluate Journals, Scientists, and Science: We Are Not There Yet

Sweedler, J. V., Jun 6 2017, In: Analytical Chemistry. 89, 11, p. 5653 1 p.

Research output: Contribution to journal › Editorial › peer-review

2012

Analytical chemistry: The synergies between the division and the journal

Sweedler, J. V. & Koppenaal, D. W., Nov 6 2012, In: Analytical chemistry. 84, 21, 1 p.

Research output: Contribution to journal › Editorial › peer-review

2020

Nominate Outstanding Measurement Scientists for the 2020 Analytical Chemistry Young Innovator and the 2021 Advances in Measurement Science Lectureship Awards!

Sweedler, J. V., Mar 3 2020, In: Analytical Chemistry. 92, 5, p. 3493 1 p.

Research output: Contribution to journal › Editorial › peer-review

Open Access

2011

Collection of peptides released from single neurons with particle-embedded monolithic capillaries followed by detection with matrix-assisted laser desorption/ionization mass spectrometry

Fan, Y., Rubakhin, S. & Sweedler, J. V., Dec 15 2011, In: Analytical chemistry. 83, 24, p. 9557-9563 7 p.

Research output: Contribution to journal › Article › peer-review

2012

Professional Editors or Scientist Editors? Both perspectives have value.

Sweedler, J. V., Mar 6 2012, In: Analytical chemistry. 84, 5, 1 p.

Research output: Contribution to journal › Editorial › peer-review

2017

The Analytical Chemistry Virtual Issue Featuring Our Advisory Boards

Sweedler, J. V., Jul 5 2017, In: Analytical Chemistry. 89, 13, p. 6921 1 p.

Research output: Contribution to journal › Editorial › peer-review

2020

Single-Cell Classification Using Mass Spectrometry through Interpretable Machine Learning

Xie, Y. R., Castro, D. C., Bell, S. E., Rubakhin, S. & Sweedler, J. V., Jul 7 2020, In: Analytical chemistry. 92, 13, p. 9338-9347 10 p.

Research output: Contribution to journal › Article › peer-review

2016

Choosing an Important Project: The First Stage to Getting Research Published

Sweedler, J. V., Apr 5 2016, In: Analytical Chemistry. 88, 7, p. 3421 1 p.

Research output: Contribution to journal › Editorial › peer-review

2018

The ACS Measurement Journals, the Analytical Division, and Pittcon 2018: A Busy Four Days

Sweedler, J. V., Feb 20 2018, In: Analytical Chemistry. 90, 4, p. 2403 1 p.

Research output: Contribution to journal › Editorial › peer-review

2016

Safety: Declare the Hidden Risks and Hazards of Your Research

Sweedler, J. V., 2016, In: Analytical Chemistry. 88, 23, p. 11261 1 p.

Research output: Contribution to journal › Editorial › peer-review

2020

The Addition of Executive Editors: A Change for the Better!

Sweedler, J. V., Pemberton, J. & Zhang, X., May 5 2020, In: Analytical Chemistry. 92, 9, p. 6185-6186 2 p.

Research output: Contribution to journal › Editorial › peer-review

2011

Comparison of tandem mass spectrometry search methods to identify neuropeptides

Akhtar, M. N., Southey, B. R., Porter, K. I., Sweedler, J. V. & Rodriguez-Zas, S. L., 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 982-984 3 p. 6112530. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

2018

Expired Epinephrine Maintains Chemical Concentration and Sterility

Weir, W. B., Fred, L. Y., Pike, M., Rubakhin, S. S., Ludwig, T. J., Shar, A. M., Zhu, L., Frederick, A., Uzoaru, I., Wang, L. & Sweedler, J. V., Jul 4 2018, In: Prehospital Emergency Care. 22, 4, p. 414-418 5 p.

Research output: Contribution to journal › Article › peer-review

2012

The Hypothalamic-Neurohypophyseal System: From Genome to Physiology

Murphy, D., Konopacka, A., Hindmarch, C., Paton, J. F. R., Sweedler, J. V., Gillette, M. U., Ueta, Y., Grinevich, V., Lozic, M. & Japundzic-Zigon, N., Apr 2012, In: Journal of Neuroendocrinology. 24, 4, p. 539-553 15 p.

Research output: Contribution to journal › Review article › peer-review

Serotonin of mast cell origin contributes to hippocampal function

Nautiyal, K. M., Dailey, C. A., Jahn, J. L., Rodriquez, E., Son, N. H., Sweedler, J. V. & Silver, R., Aug 2012, In: European Journal of Neuroscience. 36, 3, p. 2347-2359 13 p.

Research output: Contribution to journal › Article › peer-review

2016

Metal-assisted polyatomic SIMS and laser desorption/ionization for enhanced small molecule imaging of bacterial biofilms

Dunham, S. J. B., Comi, T. J., Ko, K., Li, B., Baig, N. F., Morales-Soto, N., Shrout, J. D., Bohn, P. W. & Sweedler, J. V., Jun 1 2016, In: Biointerphases. 11, 2, 02A325.

Research output: Contribution to journal › Article › peer-review

2020

D-Alanine: Distribution, origin, physiological relevance, and implications in disease

Lee, C. J., Qiu, T. A. & Sweedler, J. V., Nov 2020, In: Biochimica et Biophysica Acta - Proteins and Proteomics. 1868, 11, 140482.

Research output: Contribution to journal › Review article › peer-review

2016

Free D-aspartate in nonmammalian animals: Detection, localization, metabolism, and function

Patel, A. V., Kawai, T., Rubakhin, S. & Sweedler, J. V., Jan 1 2016, D-Amino Acids: Physiology, Metabolism, and Application. Springer Japan, p. 173-197 25 p.

Research output: Chapter in Book/Report/Conference proceeding › Chapter

2011

Using microfluidics and mass spectrometry to study peptide release in neurons

Croushore, C. A., Lee, C. Y., Zhong, M. & Sweedler, J. V., Dec 1 2011, 15th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2011, MicroTAS 2011. p. 858-860 3 p. (15th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2011, MicroTAS 2011; vol. 2).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Mice deficient in endothelin-converting enzyme-2 exhibit abnormal responses to morphine and altered peptide levels in the spinal cord

Miller, L. K., Hou, X., Rodriguiz, R. M., Gagnidze, K., Sweedler, J. V., Wetsel, W. C. & Devi, L. A., Dec 2011, In: Journal of Neurochemistry. 119, 5, p. 1074-1085 12 p.

Research output: Contribution to journal › Article › peer-review

Probing the production of amidated peptides following genetic and dietary copper manipulations

Yin, P., Bousquet-Moore, D., Annangudi, S. P., Southey, B. R., Mains, R. E., Eipper, B. A. & Sweedler, J. V., Dec 16 2011, In: PloS one. 6, 12, e28679.

Research output: Contribution to journal › Article › peer-review

2018

Molecular and Physiological Characterization of a Receptor for d -Amino Acid-Containing Neuropeptides

Checco, J. W., Zhang, G., Yuan, W. D., Yu, K., Yin, S. Y., Roberts-Galbraith, R. H., Yau, P. M., Romanova, E. V., Jing, J. & Sweedler, J. V., May 18 2018, In: ACS chemical biology. 13, 5, p. 1343-1352 10 p.

Research output: Contribution to journal › Article › peer-review

2017

Three-dimensional mesostructures as high-temperature growth templates, electronic cellular scaffolds, and self-propelled microrobots

Yan, Z., Han, M., Shi, Y., Badea, A., Yang, Y., Kulkarni, A., Hanson, E., Kandel, M. E., Wen, X., Zhang, F., Luo, Y., Lin, Q., Zhang, H., Guo, X., Huang, Y., Nan, K., Jia, S., Oraham, A. W., Mevis, M. B., Lim, J. & 19 others, Guo, X., Gao, M., Ryu, W., Yu, K. J., Nicolau, B. G., Petronico, A., Rubakhin, S. S., Lou, J., Ajayan, P. M., Thornton, K., Popescu, G., Fang, D., Sweedler, J. V., Braun, P. V., Zhang, H., Nuzzo, R. G., Huang, Y., Zhang, Y. & Rogers, J. A., Nov 7 2017, In: Proceedings of the National Academy of Sciences of the United States of America. 114, 45, p. E9455-E9464

Research output: Contribution to journal › Article › peer-review

2016

A one-step matrix application method for MALDI mass spectrometry imaging of bacterial colony biofilms

Li, B., Comi, T. J., Si, T., Dunham, S. J. B. & Sweedler, J. V., Nov 1 2016, In: Journal of Mass Spectrometry. 51, 11, p. 1030-1035 6 p.

Research output: Contribution to journal › Article › peer-review

2020

Removing Formaldehyde-Induced Peptidyl Crosslinks Enables Mass Spectrometry Imaging of Peptide Hormone Distributions from Formalin-Fixed Paraffin-Embedded Tissues

Lee, D. K., Rubakhin, S. S., Kusmartseva, I., Wasserfall, C., Atkinson, M. A. & Sweedler, J. V., Dec 7 2020, In: Angewandte Chemie - International Edition. 59, 50, p. 22584-22590 7 p.

Research output: Contribution to journal › Article › peer-review

2012

Peptidomic analyses of mouse astrocytic cell lines and rat primary cultured astrocytes

Yin, P., Knolhoff, A. M., Rosenberg, H. J., Millet, L. J., Gillette, M. U. & Sweedler, J. V., Aug 3 2012, In: Journal of Proteome Research. 11, 8, p. 3965-3973 9 p.

Research output: Contribution to journal › Article › peer-review

2016

Single Cell Peptide Heterogeneity of Rat Islets of Langerhans

Jansson, E. T., Comi, T. J., Rubakhin, S. S. & Sweedler, J. V., Sep 16 2016, In: ACS chemical biology. 11, 9, p. 2588-2595 8 p.

Research output: Contribution to journal › Article › peer-review

2017

Categorizing Cells on the Basis of their Chemical Profiles: Progress in Single-Cell Mass Spectrometry

Comi, T. J., Do, T. D., Rubakhin, S. S. & Sweedler, J. V., Mar 22 2017, In: Journal of the American Chemical Society. 139, 11, p. 3920-3929 10 p.

Research output: Contribution to journal › Review article › peer-review

Profiling of Microbial Colonies for High-Throughput Engineering of Multistep Enzymatic Reactions via Optically Guided Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry

Si, T., Li, B., Comi, T. J., Wu, Y., Hu, P., Wu, Y., Min, Y., Mitchell, D. A., Zhao, H. & Sweedler, J. V., 2017, In: Journal of the American Chemical Society. 139, 36, p. 12466-12473 8 p.

Research output: Contribution to journal › Article › peer-review

2020

Quantitative Characterization of the Neuropeptide Level Changes in Dorsal Horn and Dorsal Root Ganglia Regions of the Murine Itch Models

Tillmaand, E. G., Anapindi, K. D. B., De La Toba, E. A., Guo, C. J., Krebs, J., Lenhart, A. E., Liu, Q. & Sweedler, J. V., Mar 6 2020, In: Journal of Proteome Research. 19, 3, p. 1248-1257 10 p.

Research output: Contribution to journal › Article › peer-review

2017

Discovery of leucokinin-like neuropeptides that modulate a specific parameter of feeding motor programs in the molluscan model, Aplysia

Zhang, G., Vilim, F. S., Liu, D. D., Romanova, E. V., Yu, K., Yuan, W. D., Xiao, H., Hummon, A. B., Chen, T. T., Alexeeva, V., Yin, S. Y., Chen, S. A., Cropper, E. C., Sweedler, J. V., Weiss, K. R. & Jing, J., Nov 17 2017, In: Journal of Biological Chemistry. 292, 46, p. 18775-18789 15 p.

Research output: Contribution to journal › Article › peer-review

2020

Confronting racism in chemistry journals

Burrows, C. J., Huang, J., Wang, S., Kim, H. J., Meyer, G. J., Schanze, K., Lee, T. R., Lutkenhaus, J. L., Kaplan, D., Jones, C., Bertozzi, C., Kiessling, L., Mulcahy, M. B., Lindsley, C. W., Finn, M. G., Blum, J. D., Kamat, P., Choi, W., Snyder, S., Aldrich, C. C. & 52 others, Rowan, S., Liu, B., Liotta, D., Weiss, P. S., Zhang, D., Ganesh, K. N., Atwater, H. A., Gooding, J. J., Allen, D. T., Voigt, C. A., Sweedler, J., Schepartz, A., Rotello, V., Lecommandoux, S., Sturla, S. J., Hammes-Schiffer, S., Buriak, J., Steed, J. W., Wu, H., Zimmerman, J., Brooks, B., Savage, P., Tolman, W., Hofmann, T. F., Brennecke, J. F., Holme, T. A., Merz, K. M., Scuseria, G., Jorgensen, W., Georg, G. I., Wang, S., Proteau, P., Yates, J. R., Stang, P., Walker, G. C., Hillmyer, M., Taylor, L. S., Odom, T. W., Carreira, E., Rossen, K., Chirik, P., Miller, S. J., Shea, J. E., McCoy, A., Zanni, M., Hartland, G., Scholes, G., Loo, J. A., Milne, J., Tegen, S. B., Kulp, D. T. & Laskin, J., Jul 10 2020, In: ACS Energy Letters. 5, 7

Research output: Contribution to journal › Review article › peer-review

Open Access

2012

Glial D-serine gates NMDA receptors at excitatory synapses in prefrontal cortex

Fossat, P., Turpin, F. R., Sacchi, S., Dulong, J., Shi, T., Rivet, J. M., Sweedler, J. V., Pollegioni, L., Millan, M. J., Oliet, S. H. R. & Mothet, J. P., Mar 2012, In: Cerebral Cortex. 22, 3, p. 595-606 12 p.

Research output: Contribution to journal › Article › peer-review

An enhanced protein crosslink identification strategy using CID-cleavable chemical crosslinkers and LC/MS ⁿ analysis

Liu, F., Wu, C., Sweedler, J. V. & Goshe, M. B., Feb 2012, In: Proteomics. 12, 3, p. 401-405 5 p.

Research output: Contribution to journal › Comment/debate › peer-review

2011

MALDI mass spectrometry imaging of neuronal cell cultures

Zimmerman, T. A., Rubakhin, S. S. & Sweedler, J. V., May 2011, In: Journal of the American Society for Mass Spectrometry. 22, 5, p. 828-836 9 p.

Research output: Contribution to journal › Article › peer-review

2018

CAMP, Ca²⁺, pH_i, and NO Regulate H-like Cation Channels That Underlie Feeding and Locomotion in the Predatory Sea Slug Pleurobranchaea californica

Green, D. J., Huang, R. C., Sudlow, L., Hatcher, N., Potgieter, K., McCrohan, C., Lee, C., Romanova, E. V., Sweedler, J. V., Gillette, M. L. U. & Gillette, R., Aug 15 2018, In: ACS Chemical Neuroscience. 9, 8, p. 1986-1993 8 p.

Research output: Contribution to journal › Review article › peer-review

Spatially dependent alkyl quinolone signaling responses to antibiotics in Pseudomonas aeruginosa swarms

Morales-Soto, N., Dunham, S. J. B., Baig, N. F., Ellis, J. F., Madukoma, C. S., Bohn, P. W., Sweedler, J. V. & Shrout, J. D., Jun 15 2018, In: Journal of Biological Chemistry. 293, 24, p. 9544-9552 9 p.

Research output: Contribution to journal › Article › peer-review

2012

Analyses of pig genomes provide insight into porcine demography and evolution

Groenen, M. A. M., Archibald, A. L., Uenishi, H., Tuggle, C. K., Takeuchi, Y., Rothschild, M. F., Rogel-Gaillard, C., Park, C., Milan, D., Megens, H. J., Li, S., Larkin, D. M., Kim, H., Frantz, L. A. F., Caccamo, M., Ahn, H., Aken, B. L., Anselmo, A., Anthon, C., Auvil, L. & 116 others, Badaoui, B., Beattie, C. W., Bendixen, C., Berman, D., Blecha, F., Blomberg, J., Bolund, L., Bosse, M., Botti, S., Bujie, Z., Bystrom, M., Capitanu, B., Carvalho-Silva, D., Chardon, P., Chen, C., Cheng, R., Choi, S. H., Chow, W., Clark, R. C., Clee, C., Crooijmans, R. P. M. A., Dawson, H. D., Dehais, P., De Sapio, F., Dibbits, B., Drou, N., Du, Z. Q., Eversole, K., Fadista, J., Fairley, S., Faraut, T., Faulkner, G. J., Fowler, K. E., Fredholm, M., Fritz, E., Gilbert, J. G. R., Giuffra, E., Gorodkin, J., Griffin, D. K., Harrow, J. L., Hayward, A., Howe, K., Hu, Z. L., Humphray, S. J., Hunt, T., Hornshoøj, H., Jeon, J. T., Jern, P., Jones, M., Jurka, J., Kanamori, H., Kapetanovic, R., Kim, J., Kim, J. H., Kim, K. W., Kim, T. H., Larson, G., Lee, K., Lee, K. T., Leggett, R., Lewin, H. A., Li, Y., Liu, W., Loveland, J. E., Lu, Y., Lunney, J. K., Ma, J., Madsen, O., Mann, K., Matthews, L., McLaren, S., Morozumi, T., Murtaugh, M. P., Narayan, J., Nguyen, D. T., Ni, P., Oh, S. J., Onteru, S., Panitz, F., Park, E. W., Park, H. S., Pascal, G., Paudel, Y., Perez-Enciso, M., Ramirez-Gonzalez, R., Reecy, J. M., Rodriguez-Zas, S., Rohrer, G. A., Rund, L., Sang, Y., Schachtschneider, K., Schraiber, J. G., Schwartz, J., Scobie, L., Scott, C., Searle, S., Servin, B., Southey, B. R., Sperber, G., Stadler, P., Sweedler, J. V., Tafer, H., Thomsen, B., Wali, R., Wang, J., Wang, J., White, S., Xu, X., Yerle, M., Zhang, G., Zhang, J., Zhang, J., Zhao, S., Rogers, J., Churcher, C. & Schook, L. B., Nov 15 2012, In: Nature. 491, 7424, p. 393-398 6 p.

Research output: Contribution to journal › Article › peer-review

Two unrelated items to avoid, one for me and one for you

Sweedler, J. V., Jun 5 2012, In: Analytical chemistry. 84, 11, p. 4635-4636 2 p.

Research output: Contribution to journal › Editorial › peer-review

Let's get social

Sweedler, J. V., Apr 3 2012, In: Analytical chemistry. 84, 7, 1 p.

Research output: Contribution to journal › Editorial › peer-review

2016

Our evolving editorial team

Sweedler, J. V., Sep 6 2016, In: Analytical Chemistry. 88, 17, p. 8347 1 p.

Research output: Contribution to journal › Editorial › peer-review

2018

Top-Down Proteomics Enables Comparative Analysis of Brain Proteoforms between Mouse Strains

Davis, R. G., Park, H. M., Kim, K., Greer, J. B., Fellers, R. T., Leduc, R. D., Romanova, E. V., Rubakhin, S. S., Zombeck, J. A., Wu, C., Yau, P. M., Gao, P., Van Nispen, A. J., Patrie, S. M., Thomas, P. M., Sweedler, J. V., Rhodes, J. S. & Kelleher, N. L., Mar 20 2018, In: Analytical Chemistry. 90, 6, p. 3802-3810 9 p.

Research output: Contribution to journal › Article › peer-review

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