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2013
Detection and quantification of methylation in DNA using solid-state nanopores
Shim, J., Humphreys, G. I., Venkatesan, B. M., Munz, J. M., Zou, X., Sathe, C., Schulten, K., Kosari, F., Nardulli, A. M., Vasmatzis, G. & Bashir, R., 2013, In: Scientific reports. 3, 1389.Research output: Contribution to journal › Article › peer-review
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2010
Nanopore sensors for nucleic acid analysis
Venkatesan, B. M. & Bashir, R., Oct 2010, In: Nature Nanotechnology. 6, 10, p. 615-624 10 p.Research output: Contribution to journal › Review article › peer-review
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Localized heating on silicon field effect transistors for bio-chemical reactions
Reddy, B., Elibol, O. H., Nair, P. R., Dorvel, B. R., Bergstrom, D., Alam, M. A. & Bashir, R., Dec 1 2010, 14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010. p. 1163-1165 3 p. (14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010; vol. 2).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
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2017
Defining the frontiers of bioengineering education at Illinois and beyond
Amos, J. R., Bashir, R., Cross, K. J., Herman, G. L., Loewenstein, J., Pool, M. A. & Silverman, D., Jun 24 2017, In: ASEE Annual Conference and Exposition, Conference Proceedings. 2017-JuneResearch output: Contribution to journal › Conference article › peer-review
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2013
Cardiac myocytes' dynamic contractile behavior differs depending on heart segment
De Souza, E. J., Ahmed, W., Chan, V., Bashir, R. & Saif, T., Feb 2013, In: Biotechnology and bioengineering. 110, 2, p. 628-636 9 p.Research output: Contribution to journal › Article › peer-review
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2010
Fabrication of silicon nanoplate and nanowire biosensor arrays with high specificity and sub-picomolar limits of detection
Dorvel, B., Reddy, B., Bergstrom, D., Alam, M. A., Clare, S. & Bashir, R., Dec 1 2010, 14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010. p. 1871-1873 3 p. (14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010; vol. 3).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
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2018
Biodegradable Monocrystalline Silicon Photovoltaic Microcells as Power Supplies for Transient Biomedical Implants
Lu, L., Yang, Z., Meacham, K., Cvetkovic, C., Corbin, E. A., Vázquez-Guardado, A., Xue, M., Yin, L., Boroumand, J., Pakeltis, G., Sang, T., Yu, K. J., Chanda, D., Bashir, R., Gereau, R. W., Sheng, X. & Rogers, J. A., Jun 5 2018, In: Advanced Energy Materials. 8, 16, 1703035.Research output: Contribution to journal › Article › peer-review
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2010
Stiffness of the substrate influences the phenotype of embryonic chicken cardiac myocytes
Bajaj, P., Tang, X., Saif, T. A. & Bashir, R., Dec 15 2010, In: Journal of Biomedical Materials Research - Part A. 95, 4, p. 1261-1269 9 p.Research output: Contribution to journal › Article › peer-review
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2013
Microfluidic CD4+ and CD8+ T lymphocyte counters for point-of-care HIV diagnostics using whole blood
Watkins, N. N., Hassan, U., Damhorst, G., Ni, H., Vaid, A., Rodriguez, W. & Bashir, R., Dec 4 2013, In: Science Translational Medicine. 5, 214, 214ra170.Research output: Contribution to journal › Article › peer-review
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2018
3D printing for preoperative planning and surgical training: a review
Ganguli, A., Pagan-Diaz, G. J., Grant, L., Cvetkovic, C., Bramlet, M., Vozenilek, J., Kesavadas, T. & Bashir, R., Sep 1 2018, In: Biomedical microdevices. 20, 3, 65.Research output: Contribution to journal › Review article › peer-review
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2013
On-chip magnetic separation and encapsulation of cells in droplets
Chen, A., Byvank, T., Chang, W. J., Bharde, A., Vieira, G., Miller, B. L., Chalmers, J. J., Bashir, R. & Sooryakumar, R., Mar 21 2013, In: Lab on a chip. 13, 6, p. 1172-1181 10 p.Research output: Contribution to journal › Article › peer-review
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2018
Robust label-free microRNA detection using one million ISFET array
Ganguli, A., Watanabe, Y., Hwang, M. T., Huang, J. C. & Bashir, R., Jun 2 2018, In: Biomedical microdevices. 20, 2, 1 p.Research output: Contribution to journal › Article › peer-review
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2013
Enabling microscale and nanoscale approaches for bioengineered cardiac tissue
Chan, V., Raman, R., Cvetkovic, C. & Bashir, R., Mar 26 2013, In: ACS Nano. 7, 3, p. 1830-1837 8 p.Research output: Contribution to journal › Article › peer-review
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Biomedical micro and nanotechnology: From lab-on-chip to building systems with cells
Hassan, U., Bajaj, P., Damhorst, G. & Bashir, R., Dec 1 2013, 2013 Transducers and Eurosensors XXVII: The 17th International Conference on Solid-State Sensors, Actuators and Microsystems, TRANSDUCERS and EUROSENSORS 2013. p. 2539-2543 5 p. 6627323. (2013 Transducers and Eurosensors XXVII: The 17th International Conference on Solid-State Sensors, Actuators and Microsystems, TRANSDUCERS and EUROSENSORS 2013).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
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2017
Investigating the Life Expectancy and Proteolytic Degradation of Engineered Skeletal Muscle Biological Machines
Cvetkovic, C., Ferrall-Fairbanks, M. C., Ko, E., Grant, L., Kong, H., Platt, M. O. & Bashir, R., Dec 1 2017, In: Scientific reports. 7, 1, 3775.Research output: Contribution to journal › Article › peer-review
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2018
Optomechanical microrheology of single adherent cancer cells
Adeniba, O. O., Corbin, E. A., Ewoldt, R. H. & Bashir, R., Mar 1 2018, In: APL Bioengineering. 2, 1, 016108.Research output: Contribution to journal › Article › peer-review
Open Access -
2017
Integrated cantilever-based biosensors for the detection of chemical and biological entities
Corbin, E. A., YekrangSafakar, A., Adeniba, O., Gupta, A., Park, K. & Bashir, R., Jan 1 2017, Nanotechnology in Biology and Medicine: Methods, Devices, and Applications, Second Edition. CRC Press, p. 469-529 61 p.Research output: Chapter in Book/Report/Conference proceeding › Chapter
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2010
Beating the Nernst limit of 59mV/pH with double-gated nano-scale field-effect transistors and its applications to ultra-sensitive DNA biosensors
Go, J., Nair, P. R., Reddy, B., Dorvel, B., Bashir, R. & Alam, M. A., Dec 1 2010, 2010 IEEE International Electron Devices Meeting, IEDM 2010. p. 8.7.1-8.7.4 5703325. (Technical Digest - International Electron Devices Meeting, IEDM).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
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2013
Nanotextured superhydrophobic electrodes enable detection of attomolar-scale DNA concentration within a droplet by non-faradaic impedance spectroscopy
Ebrahimi, A., Dak, P., Salm, E., Dash, S., Garimella, S. V., Bashir, R. & Alam, M. A., Nov 7 2013, In: Lab on a chip. 13, 21, p. 4248-4256 9 p.Research output: Contribution to journal › Article › peer-review
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2017
A modular approach to the design, fabrication, and characterization of muscle-powered biological machines
Raman, R., Cvetkovic, C. & Bashir, R., Mar 1 2017, In: Nature Protocols. 12, 3, p. 519-533 15 p.Research output: Contribution to journal › Article › peer-review
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Biohybrid actuators for robotics: A review of devices actuated by living cells
Ricotti, L., Trimmer, B., Feinberg, A. W., Raman, R., Parker, K. K., Bashir, R., Sitti, M., Martel, S., Dario, P. & Menciassi, A., Nov 22 2017, In: Science Robotics. 2, 12, eaaq0495.Research output: Contribution to journal › Review article › peer-review
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2010
Three-dimensional photopatterning of hydrogels using stereolithography for long-term cell encapsulation
Chan, V., Zorlutuna, P., Jeong, J. H., Kong, H. & Bashir, R., Aug 21 2010, In: Lab on a chip. 10, 16, p. 2062-2070 9 p.Research output: Contribution to journal › Article › peer-review
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2013
On-chip parallel detection of foodborne pathogens using loop-mediated isothermal amplification
Duarte, C., Salm, E., Dorvel, B., Reddy, B. & Bashir, R., Oct 1 2013, In: Biomedical microdevices. 15, 5, p. 821-830 10 p.Research output: Contribution to journal › Article › peer-review
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2010
A nanoscale Ti/GaAs metal-semiconductor hybrid sensor for room temperature light detection
Newaz, A. K. M., Chang, W. J., Wallace, K. D., Edge, L. C., Wickline, S. A., Bashir, R., Gilbertson, A. M., Cohen, L. F. & Solin, S. A., Aug 23 2010, In: Applied Physics Letters. 97, 8, 082105.Research output: Contribution to journal › Article › peer-review
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2013
Cardiomyocyte Imaging Using Real-Time Spatial Light Interference Microscopy (SLIM)
Bhaduri, B., Wickland, D., Wang, R., Chan, V., Bashir, R. & Popescu, G., Feb 15 2013, In: PloS one. 8, 2, e56930.Research output: Contribution to journal › Article › peer-review
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2017
Mobile Platform for Multiplexed Detection and Differentiation of Disease-Specific Nucleic Acid Sequences, Using Microfluidic Loop-Mediated Isothermal Amplification and Smartphone Detection
Chen, W., Yu, H., Sun, F., Ornob, A., Brisbin, R., Ganguli, A., Vemuri, V., Strzebonski, P., Cui, G., Allen, K. J., Desai, S. A., Lin, W., Nash, D. M., Hirschberg, D. L., Brooks, I., Bashir, R. & Cunningham, B. T., Nov 7 2017, In: Analytical chemistry. 89, 21, p. 11219-11226 8 p.Research output: Contribution to journal › Article › peer-review
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2010
Measurement of adherent cell mass and growth
Park, K., Millet, L. J., Kim, N., Li, H., Jin, X., Popescu, G., Aluru, N. R., Hsia, K. J. & Bashir, R., Nov 30 2010, In: Proceedings of the National Academy of Sciences of the United States of America. 107, 48, p. 20691-20696 6 p.Research output: Contribution to journal › Article › peer-review
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2018
A microfluidic biochip platform for electrical quantification of proteins
Valera, E., Berger, J., Hassan, U., Ghonge, T., Liu, J., Rappleye, M., Winter, J., Abboud, D., Haidry, Z., Healey, R., Hung, N. T., Leung, N., Mansury, N., Hasnain, A., Lannon, C., Price, Z., White, K. & Bashir, R., May 21 2018, In: Lab on a chip. 18, 10, p. 1461-1470 10 p.Research output: Contribution to journal › Article › peer-review
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2017
A microfluidic technique to estimate antigen expression on particles
Ghonge, T., Ganguli, A., Valera, E., Saadah, M., Damhorst, G. L., Berger, J., Pagan Diaz, G., Hassan, U., Chheda, M., Haidry, Z., Liu, S., Hwu, C. & Bashir, R., Dec 1 2017, In: APL Bioengineering. 1, 1, 016103.Research output: Contribution to journal › Article › peer-review
Open Access -
3D Printed Stem-Cell-Laden, Microchanneled Hydrogel Patch for the Enhanced Release of Cell-Secreting Factors and Treatment of Myocardial Infarctions
Melhem, M. R., Park, J., Knapp, L., Reinkensmeyer, L., Cvetkovic, C., Flewellyn, J., Lee, M. K., Jensen, T. W., Bashir, R., Kong, H. & Schook, L. B., Sep 11 2017, In: ACS Biomaterials Science and Engineering. 3, 9, p. 1980-1987 8 p.Research output: Contribution to journal › Article › peer-review
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Detection of methylation on dsDNA using nanopores in a MoS2 membrane
Shim, J., Banerjee, S., Qiu, H., Smithe, K. K. H., Estrada, D., Bello, J., Pop, E., Schulten, K. & Bashir, R., Oct 31 2017, In: Nanoscale. 9, 39, p. 14836-14845 10 p.Research output: Contribution to journal › Article › peer-review
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2013
3D fabrication of biological machines
Chan, V., Kong, H. J. & Bashir, R., Oct 31 2013, 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2013. p. 314-317 4 p. 6609500. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
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Electrochemistry at the edge of a single graphene layer in a nanopore
Banerjee, S., Shim, J., Rivera, J., Jin, X., Estrada, D., Solovyeva, V., You, X., Pak, J., Pop, E., Aluru, N. & Bashir, R., Jan 22 2013, In: ACS Nano. 7, 1, p. 834-843 10 p.Research output: Contribution to journal › Article › peer-review
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2018
Simulation and Fabrication of Stronger, Larger, and Faster Walking Biohybrid Machines
Pagan-Diaz, G. J., Zhang, X., Grant, L., Kim, Y., Aydin, O., Cvetkovic, C., Ko, E., Solomon, E., Hollis, J., Kong, H., Saif, T., Gazzola, M. & Bashir, R., Jun 6 2018, In: Advanced Functional Materials. 28, 23, 1801145.Research output: Contribution to journal › Article › peer-review
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2013
Direct DNA sequencing using nanopore sensors
Bashir, R., Apr 1 2013, In: Genetic Engineering and Biotechnology News. 33, 7, p. 34-35+45Research output: Contribution to journal › Article › peer-review
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Micromechanical properties of hydrogels measured with MEMS resonant sensors
Corbin, E. A., Millet, L. J., Pikul, J. H., Johnson, C. L., Georgiadis, J. G., King, W. P. & Bashir, R., Apr 1 2013, In: Biomedical microdevices. 15, 2, p. 311-319 9 p.Research output: Contribution to journal › Article › peer-review
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2010
Fluidic measurement of electric field sensitivity of Ti-GaAs Schottky junction gated field effect biosensors
Chang, W. J., Suk, H. J., Newaz, A. K. M., Wallace, K. D., Wickline, S. A., Solin, S. A. & Bashir, R., Oct 1 2010, In: Biomedical microdevices. 12, 5, p. 849-854 6 p.Research output: Contribution to journal › Article › peer-review
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2013
Effect of biointerfacing linker chemistries on the sensitivity of silicon nanowires for protein detection
Dorvel, B., Reddy, B. & Bashir, R., Oct 15 2013, In: Analytical chemistry. 85, 20, p. 9493-9500 8 p.Research output: Contribution to journal › Article › peer-review
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Patterned Three-Dimensional Encapsulation of Embryonic Stem Cells using Dielectrophoresis and Stereolithography
Bajaj, P., Marchwiany, D., Duarte, C. & Bashir, R., Mar 2013, In: Advanced Healthcare Materials. 2, 3, p. 450-458 9 p.Research output: Contribution to journal › Article › peer-review
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2017
Combining Biomarkers with EMR Data to Identify Patients in Different Phases of Sepsis
Taneja, I., Reddy, B., Damhorst, G., Dave Zhao, S., Hassan, U., Price, Z., Jensen, T., Ghonge, T., Patel, M., Wachspress, S., Winter, J., Rappleye, M., Smith, G., Healey, R., Ajmal, M., Khan, M., Patel, J., Rawal, H., Sarwar, R., Soni, S. & 6 others, , Dec 1 2017, In: Scientific reports. 7, 1, 10800.Research output: Contribution to journal › Article › peer-review
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2010
DNA sensing using nanocrystalline surface-enhanced Al2O 3 nanopore sensors
Venkatesan, B. M., Shah, A. B., Zuo, J. M. & Bashir, R., Apr 23 2010, In: Advanced Functional Materials. 20, 8, p. 1266-1275 10 p.Research output: Contribution to journal › Article › peer-review
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2013
Tailoring the dependency between rigidity and water uptake of a microfabricated hydrogel with the conformational rigidity of a polymer cross-linker
Schmidt, J. J., Jeong, J. H., Chan, V., Cha, C., Baek, K., Lai, M. H., Bashir, R. & Kong, H., May 13 2013, In: Biomacromolecules. 14, 5, p. 1361-1369 9 p.Research output: Contribution to journal › Article › peer-review
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Biomedical micro and nanotechnology: From lab-on-chip to building with cells
Hassan, U., Bajaj, P., Salm, E., Damhorst, G. & Bashir, R., Dec 16 2013, 71st Device Research Conference, DRC 2013 - Conference Digest. 1 p. 6633767. (Device Research Conference - Conference Digest, DRC).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
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2010
Temperature measurement in fluid directly at the surface with high spatial resolution using a covalently attached fluorescent dye
Reddy, B., Dorvel, B. R., Elibol, O. H., Nair, P. R., Alam, M. A., Bergstrom, D. E. & Bashir, R., 2010, 2010 18th Biennial University/Government/Industry Micro-Nano Symposium, UGIM 2010 - Proceedings. 5508917. (Biennial University/Government/Industry Microelectronics Symposium - Proceedings).Research output: Chapter in Book/Report/Conference proceeding › Conference contribution
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2018
Point-of-care sensors for the management of sepsis
Reddy, B., Hassan, U., Seymour, C., Angus, D. C., Isbell, T. S., White, K., Weir, W., Yeh, L., Vincent, A. & Bashir, R., Sep 1 2018, In: Nature biomedical engineering. 2, 9, p. 640-648 9 p.Research output: Contribution to journal › Review article › peer-review
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2017
Evidence of differential mass change rates between human breast cancer cell lines in culture
Corbin, E. A., Adeniba, O. O., Cangellaris, O. V., King, W. P. & Bashir, R., Mar 1 2017, In: Biomedical microdevices. 19, 1, 10.Research output: Contribution to journal › Article › peer-review
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2018
Detecting sepsis by observing neutrophil motility
Hassan, U., Valera, E. & Bashir, R., Apr 1 2018, In: Nature biomedical engineering. 2, 4, p. 197-198 2 p.Research output: Contribution to journal › Article › peer-review
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Perspective: The promise of multi-cellular engineered living systems
Kamm, R. D., Bashir, R., Arora, N., Dar, R. D., Gillette, M. U., Griffith, L. G., Kemp, M. L., Kinlaw, K., Levin, M., Martin, A. C., McDevitt, T. C., Nerem, R. M., Powers, M. J., Saif, T. A., Sharpe, J., Takayama, S., Takeuchi, S., Weiss, R., Ye, K., Yevick, H. G. & 1 others, , Dec 1 2018, In: APL Bioengineering. 2, 4, 040901.Research output: Contribution to journal › Article › peer-review
Open Access -
2013
A liposome-based ion release impedance sensor for biological detection
Damhorst, G. L., Smith, C. E., Salm, E. M., Sobieraj, M. M., Ni, H., Kong, H. & Bashir, R., Oct 2013, In: Biomedical microdevices. 15, 5, p. 895-905 11 p.Research output: Contribution to journal › Article › peer-review
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2010
Rapid thermal lysis of cells using silicon-diamond microcantilever heaters
Privorotskaya, N., Liu, Y. S., Lee, J., Zeng, H., Carlisle, J. A., Radadia, A., Millet, L., Bashir, R. & King, W. P., 2010, In: Lab on a chip. 10, 9, p. 1135-1141 7 p.Research output: Contribution to journal › Article › peer-review