Find Research Outputs

Search concepts
Selected Filters

Publication Year

  • 2019
  • 2018
  • 2017
  • 2016
  • 2015
  • 2014
  • 2012
  • 2011
  • 2010

Author

  • Jonathan V Sweedler
2012

First survey and functional annotation of prohormone and convertase genes in the pig

Porter, K. I., Southey, B. R., Sweedler, J. V. & Rodriguez-Zas, S. L., Nov 15 2012, In : BMC genomics. 13, 1, 582.

Research output: Contribution to journalArticle

2019

What Does Your Future Academic Productivity Depend On?

Sweedler, J. V., Sep 3 2019, In : Analytical chemistry. 91, 17, 1 p.

Research output: Contribution to journalEditorial

Open Access
2014

Accurate assignment of significance to neuropeptide identifications using monte carlo K-permuted decoy databases

Akhtar, M. N., Southey, B. R., Andrén, P. E., Sweedler, J. V. & Rodriguez-Zas, S. L., Oct 17 2014, In : PloS one. 9, 10, e111112.

Research output: Contribution to journalArticle

2012

Let's get social

Sweedler, J. V., Apr 3 2012, In : Analytical chemistry. 84, 7, 1 p.

Research output: Contribution to journalEditorial

2016

Label-free molecular imaging of bacterial communities of the opportunistic pathogen Pseudomonas aeruginosa

Baig, N., Polisetti, S., Morales-Soto, N., Dunham, S. J. B., Sweedler, J. V., Shrout, J. D. & Bohn, P. W., Jan 1 2016, Biosensing and Nanomedicine IX. Mohseni, H., Agahi, M. H. & Razeghi, M. (eds.). SPIE, 993004. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 9930).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2018

A Resource for Our Reagents: ACS Reagent Chemicals

Sweedler, J. V., May 1 2018, In : Analytical chemistry. 90, 9, 1 p.

Research output: Contribution to journalEditorial

2019

Spatiotemporal dynamics of molecular messaging in bacterial co-cultures studied by multimodal chemical imaging

Cao, T., Morales-Soto, N., Jia, J., Baig, N. F., Dunham, S. J. B., Ellis, J., Sweedler, J. V., Shrout, J. D. & Bohn, P. W., Jan 1 2019, Photonic Diagnosis and Treatment of Infections and Inflammatory Diseases II. Dai, T., Popp, J. & Wu, M. X. (eds.). SPIE, 108630A. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 10863).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2010

Quantitative neuroproteomics of the synapse.

Ramos-Ortolaza, D. L., Bushlin, I., Abul-Husn, N., Annangudi, S. P., Sweedler, J. V. & Devi, L. A., 2010, In : Methods in molecular biology (Clifton, N.J.). 615, p. 227-246 20 p.

Research output: Contribution to journalArticle

2012

Now it is a highlight, not an acceleration

Sweedler, J. V., Sep 4 2012, In : Analytical chemistry. 84, 17, 1 p.

Research output: Contribution to journalEditorial

Analytical chemistry: The synergies between the division and the journal

Sweedler, J. V. & Koppenaal, D. W., Nov 6 2012, In : Analytical chemistry. 84, 21, 1 p.

Research output: Contribution to journalEditorial

D-Aspartate acts as a signaling molecule in nervous and neuroendocrine systems

Ota, N., Shi, T. & Sweedler, J. V., Nov 1 2012, In : Amino Acids. 43, 5, p. 1873-1886 14 p.

Research output: Contribution to journalReview article

2011

The Notch effector gene Hes1 regulates migration of hypothalamic neurons, neuropeptide content and axon targeting to the pituitary

Aujla, P. K., Bora, A., Monahan, P., Sweedler, J. V. & Raetzman, L. T., May 1 2011, In : Developmental Biology. 353, 1, p. 61-71 11 p.

Research output: Contribution to journalArticle

2014

Prediction and biochemical demonstration of a catabolic pathway for the osmoprotectant proline betaine

Kumar, R., Zhao, S., Vetting, M. W., Wood, B. M. K., Sakai, A., Cho, K., Solbiati, J., Almo, S. C., Sweedler, J. V., Jacobson, M. P., Gerlt, J. A. & Cronan, J. E., Feb 11 2014, In : mBio. 5, 1, e00933-13.

Research output: Contribution to journalArticle

2011

Integration of sequence and functional information to identify and annotate neuropeptides in the pig genome

Porter, K. I., Southey, B. R., Akhtar, M. N., Sweedler, J. V. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 988-990 3 p. 6112532. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2014

Fibrinogen α-chain-derived peptide is upregulated in hippocampus of rats exposed to acute morphine injection and spontaneous alternation testing

Maki, A. E., Morris, K. A., Catherman, K., Chen, X., Hatcher, N. G., Gold, P. E. & Sweedler, J. V., Jun 2014, In : Pharmacology Research and Perspectives. 2, 3, e00037.

Research output: Contribution to journalArticle

2010

A hybrid, de novo based, genome-wide database search approach applied to the sea urchin neuropeptidome

Menschaert, G., Vandekerckhove, T. T. M., Baggerman, G., Landuyt, B., Sweedler, J. V., Schoofs, L., Luyten, W. & Van Criekinge, W., Feb 5 2010, In : Journal of Proteome Research. 9, 2, p. 990-996 7 p.

Research output: Contribution to journalArticle

2011

Chronic morphine alters the presynaptic protein profile: Identification of novel molecular targets using proteomics and network analysis

Abul-Husn, N. S., Annangudi, S. P., Ma'ayan, A., Ramos-Ortolaza, D. L., Stockton, S. D., Gomes, I., Sweedler, J. V. & Devi, L. A., Oct 17 2011, In : PloS one. 6, 10, e25535.

Research output: Contribution to journalArticle

2012

Serotonin of mast cell origin contributes to hippocampal function

Nautiyal, K. M., Dailey, C. A., Jahn, J. L., Rodriquez, E., Son, N. H., Sweedler, J. V. & Silver, R., Aug 1 2012, In : European Journal of Neuroscience. 36, 3, p. 2347-2359 13 p.

Research output: Contribution to journalArticle

2010

Fishing for the hidden peptidome in health and disease (Drug Abuse)

Fricker, L. D. & Sweedler, J. V., Dec 1 2010, In : AAPS Journal. 12, 4, p. 679-682 4 p.

Research output: Contribution to journalReview article

2019

The Periodic Table of Elements at 150

Sweedler, J. V., May 7 2019, In : Analytical chemistry. 91, 9, 1 p.

Research output: Contribution to journalEditorial

Open Access
2012

Label-free quantitation of peptide release from neurons in a microfluidic device with mass spectrometry imaging

Zhong, M., Lee, C. Y., Croushore, C. A. & Sweedler, J. V., May 8 2012, In : Lab on a chip. 12, 11, p. 2037-2045 9 p.

Research output: Contribution to journalArticle

2011

Neuropeptidomics

Sweedler, J. V., Xie, F. & Bora, A., Sep 23 2011, Protein and Peptide Mass Spectrometry in Drug Discovery. John Wiley and Sons, p. 393-433 41 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

2017

2018: The 90th Volume of Analytical Chemistry and Still Growing

Sweedler, J. V., Dec 5 2017, In : Analytical chemistry. 89, 23, 1 p.

Research output: Contribution to journalEditorial

2010

Serotonin and its metabolism in basal deuterostomes: Insights from Strongylocentrotus purpuratus and Xenoturbella bocki

Squires, L. N., Rubakhin, S. S., Wadhams, A. A., Talbot, K. N., Nakano, H., Moroz, L. L. & Sweedler, J. V., Aug 1 2010, In : Journal of Experimental Biology. 213, 15, p. 2647-2654 8 p.

Research output: Contribution to journalArticle

2014

Analysis of endogenous nucleotides by single cell capillary electrophoresis-mass spectrometry

Liu, J. X., Aerts, J. T., Rubakhin, S. S., Zhang, X. X. & Sweedler, J. V., Oct 15 2014, In : Analyst. 139, 22, p. 5835-5842 8 p.

Research output: Contribution to journalArticle

2015

Mass spectrometry-based characterization of endogenous peptides and metabolites in small volume samples

Ong, T. H., Tillmaand, E. G., Makurath, M., Rubakhin, S. S. & Sweedler, J. V., Jul 1 2015, In : Biochimica et Biophysica Acta - Proteins and Proteomics. 1854, 7, p. 732-740 9 p.

Research output: Contribution to journalReview article

2017

Categorizing Cells on the Basis of their Chemical Profiles: Progress in Single-Cell Mass Spectrometry

Comi, T. J., Do, T. D., Rubakhin, S. S. & Sweedler, J. V., Mar 22 2017, In : Journal of the American Chemical Society. 139, 11, p. 3920-3929 10 p.

Research output: Contribution to journalReview article

2012

Mechanical tension modulates local and global vesicle dynamics in neurons

Ahmed, W. W., Li, T. C., Rubakhin, S. S., Chiba, A., Sweedler, J. V. & Saif, T. A., Jun 1 2012, In : Cellular and Molecular Bioengineering. 5, 2, p. 155-164 10 p.

Research output: Contribution to journalArticle

2014

D-Alanine in the islets of Langerhans of rat pancreas

Ota, N., Rubakhin, S. S. & Sweedler, J. V., May 2 2014, In : Biochemical and Biophysical Research Communications. 447, 2, p. 328-333 6 p.

Research output: Contribution to journalArticle

2017

Deterministic Integration of Biological and Soft Materials onto 3D Microscale Cellular Frameworks

McCracken, J. M., Xu, S., Badea, A., Jang, K. I., Yan, Z., Wetzel, D. J., Nan, K., Lin, Q., Han, M., Anderson, M. A., Lee, J. W., Wei, Z., Pharr, M., Wang, R., Su, J., Rubakhin, S. S., Sweedler, J. V., Rogers, J. A. & Nuzzo, R. G., Sep 2017, In : Advanced Biosystems. 1, 9, 1700068.

Research output: Contribution to journalArticle

Open Access
2015

Differential peptidomics assessment of strain and age differences in mice in response to acute cocaine administration

Romanova, E. V., Rubakhin, S. S., Ossyra, J. R., Zombeck, J. A., Nosek, M. R., Sweedler, J. V. & Rhodes, J. S., Dec 1 2015, In : Journal of Neurochemistry. 135, 5, p. 1038-1048 11 p.

Research output: Contribution to journalArticle

2017

A unique combination of micronutrients rejuvenates cognitive performance in aged mice

Perez, S. D., Du, K., Rendeiro, C., Wang, L., Wu, Q., Rubakhin, S. S., Vazhappilly, R., Baxter, J. H., Sweedler, J. V. & Rhodes, J. S., Mar 1 2017, In : Behavioural Brain Research. 320, p. 97-112 16 p.

Research output: Contribution to journalArticle

2011

Metabolic differentiation of neuronal phenotypes by single-cell capillary electrophoresis-electrospray ionization-mass spectrometry

Nemes, P., Knolhoff, A. M., Rubakhin, S. & Sweedler, J. V., Sep 1 2011, In : Analytical chemistry. 83, 17, p. 6810-6817 8 p.

Research output: Contribution to journalArticle

2017

MALDI MS Guided Liquid Microjunction Extraction for Capillary Electrophoresis-Electrospray Ionization MS Analysis of Single Pancreatic Islet Cells

Comi, T. J., Makurath, M. A., Philip, M. C., Rubakhin, S. S. & Sweedler, J. V., Jul 18 2017, In : Analytical chemistry. 89, 14, p. 7765-7772 8 p.

Research output: Contribution to journalArticle

Single Cell Profiling Using Ionic Liquid Matrix-Enhanced Secondary Ion Mass Spectrometry for Neuronal Cell Type Differentiation

Do, T. D., Comi, T. J., Dunham, S. J. B., Rubakhin, S. S. & Sweedler, J. V., Mar 7 2017, In : Analytical chemistry. 89, 5, p. 3078-3086 9 p.

Research output: Contribution to journalArticle

2012
2015

Peptidomics and Secretomics of the Mammalian Peripheral Sensory-Motor System

Tillmaand, E. G., Yang, N., Kindt, C. A. C., Romanova, E. V., Rubakhin, S. S. & Sweedler, J. V., Dec 1 2015, In : Journal of the American Society for Mass Spectrometry. 26, 12, p. 2051-2061 11 p.

Research output: Contribution to journalArticle

2019

Lipid Analysis of 30 000 Individual Rodent Cerebellar Cells Using High-Resolution Mass Spectrometry

Neumann, E. K., Ellis, J. F., Triplett, A. E., Rubakhin, S. S. & Sweedler, J. V., Jan 1 2019, In : Analytical chemistry.

Research output: Contribution to journalArticle

2010

Mass Spectrometry Imaging: Principles and Protocols

Rubakhin, S. (ed.) & Sweedler, J. V. (ed.), 2010, Humana Press. 488 p. (Methods in Molecular Biology; vol. 656)

Research output: Book/ReportBook

2017
2010

Circadian integration of glutamatergic signals by little SAAS in novel suprachiasmatic circuits

Atkins, N., Mitchell, J. W., Romanova, E. V., Morgan, D. J., Cominski, T. P., Ecker, J. L., Pintar, J. E., Sweedler, J. V. & Gillette, M. U., Nov 1 2010, In : PloS one. 5, 9, p. 1-13 13 p., e12612.

Research output: Contribution to journalArticle

2016

A D-amino acid-containing neuropeptide discovery funnel

Livnat, I., Tai, H. C., Jansson, E. T., Bai, L., Romanova, E. V., Chen, T. T., Yu, K., Chen, S. A., Zhang, Y., Wang, Z. Y., Liu, D. D., Weiss, K. R., Jing, J. & Sweedler, J. V., Jan 1 2016, In : Analytical chemistry. 88, 23, p. 11868-11876 9 p.

Research output: Contribution to journalArticle

2018

Molecular and Physiological Characterization of a Receptor for d -Amino Acid-Containing Neuropeptides

Checco, J. W., Zhang, G., Yuan, W. D., Yu, K., Yin, S. Y., Roberts-Galbraith, R. H., Yau, P. M., Romanova, E. V., Jing, J. & Sweedler, J. V., May 18 2018, In : ACS chemical biology. 13, 5, p. 1343-1352 10 p.

Research output: Contribution to journalArticle

2010

Feedforward compensation mediated by the central and peripheral actions of a single neuropeptide discovered using representational difference analysis

Jing, J., Sweedler, J. V., Cropper, E. C., Alexeeva, V., Park, J. H., Romanova, E. V., Xie, F., Dembrow, N. C., Ludwar, B. C., Weiss, K. R. & Vilim, F. S., Dec 8 2010, In : Journal of Neuroscience. 30, 49, p. 16545-16558 14 p.

Research output: Contribution to journalArticle

2017

Discovery of leucokinin-like neuropeptides that modulate a specific parameter of feeding motor programs in the molluscan model, Aplysia

Zhang, G., Vilim, F. S., Liu, D. D., Romanova, E. V., Yu, K., Yuan, W. D., Xiao, H., Hummon, A. B., Chen, T. T., Alexeeva, V., Yin, S. Y., Chen, S. A., Cropper, E. C., Sweedler, J. V., Weiss, K. R. & Jing, J., Nov 17 2017, In : Journal of Biological Chemistry. 292, 46, p. 18775-18789 15 p.

Research output: Contribution to journalArticle

2018

Bioinformatics for prohormone and neuropeptide discovery

Southey, B. R., Romanova, E. V., Rodriguez-Zas, S. L. & Sweedler, J. V., Jan 1 2018, Methods in Molecular Biology. Humana Press Inc., p. 71-96 26 p. (Methods in Molecular Biology; vol. 1719).

Research output: Chapter in Book/Report/Conference proceedingChapter

Disruption of microglia histone acetylation and protein pathways in mice exhibiting inflammation-associated depression-like symptoms

Rodriguez-Zas, S. L., Wu, C., Southey, B. R., O'Connor, J. C., Nixon, S. E., Garcia, R., Zavala, C., Lawson, M., McCusker, R. H., Romanova, E. V., Sweedler, J. V., Kelley, K. W. & Dantzer, R., Nov 2018, In : Psychoneuroendocrinology. 97, p. 47-58 12 p.

Research output: Contribution to journalArticle

2011

Neuropeptidomics of the mammalian brain

Xie, F., Romanova, E. V. & Sweedler, J. V., Jun 3 2011, Neuroproteomics. Li, K. W. (ed.). p. 229-242 14 p. (Neuromethods; vol. 57).

Research output: Chapter in Book/Report/Conference proceedingChapter

2018

Multimodal Chemical Analysis of the Brain by High Mass Resolution Mass Spectrometry and Infrared Spectroscopic Imaging

Neumann, E. K., Comi, T. J., Spegazzini, N., Mitchell, J. W., Rubakhin, S. S., Gillette, M. U., Bhargava, R. & Sweedler, J. V., Oct 2 2018, In : Analytical chemistry. 90, 19, p. 11572-11580 9 p.

Research output: Contribution to journalArticle