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2013

Discovery of new enzymes and metabolic pathways by using structure and genome context

Zhao, S., Kumar, R., Sakai, A., Vetting, M. W., Wood, B. M. K., Brown, S., Bonanno, J. B., Hillerich, B. S., Seidel, R. D., Babbitt, P. C., Almo, S. C., Sweedler, J. V., Gerlt, J. A., Cronan, J. E. & Jacobson, M. P., Sep 24 2013, In : Nature. 502, 7473, p. 698-702 5 p.

Research output: Contribution to journalArticle

Metabolic Networks and Pathways
Genome
Multigene Family
Substrate Specificity
Enzymes
2016

The Midwest Universities Analytical Chemistry Conference: Still the Midwest's Secret Weapon?

Sweedler, J. V., Nov 1 2016, In : Analytical chemistry. 88, 21, 1 p.

Research output: Contribution to journalEditorial

Chemical analysis
2011

A novel pyridoxal 5'-phosphate-dependent amino acid racemase in the aplysia californica central nervous system

Wang, L., Ota, N., Romanova, E. V. & Sweedler, J. V., Apr 15 2011, In : Journal of Biological Chemistry. 286, 15, p. 13765-13774 10 p.

Research output: Contribution to journalArticle

aspartate racemase
Amino Acid Isomerases
D-Aspartic Acid
Aplysia
Pyridoxal Phosphate

Integration of sequence and functional information to identify and annotate neuropeptides in the pig genome

Porter, K. I., Southey, B. R., Akhtar, M. N., Sweedler, J. V. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 988-990 3 p. 6112532. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Neuropeptides
Swine
Genes
Genome
Proprotein Convertases
2019

Neuropeptidomics of the mammalian brain

Xie, F., Anapindi, K. D. B., Romanova, E. V. & Sweedler, J. V., Jan 1 2019, Neuromethods. Humana Press Inc., p. 161-177 17 p. (Neuromethods; vol. 146).

Research output: Chapter in Book/Report/Conference proceedingChapter

Brain
Peptides
Mass spectrometry
Mass Spectrometry
Liquid chromatography
2014

Small-Volume Analysis of Cell-Cell Signaling Molecules in the Brain

Romanova, E. V., Aerts, J. T., Croushore, C. A. & Sweedler, J. V., Jan 1 2014, In : Neuropsychopharmacology. 39, 1, p. 50-64 15 p.

Research output: Contribution to journalReview article

Cell Size
Brain
Research
Nervous System
Technology
2019

Multidimensional Top-Down Proteomics of Brain-Region-Specific Mouse Brain Proteoforms Responsive to Cocaine and Estradiol

Park, H. M., Satta, R., Davis, R. G., Goo, Y. A., Leduc, R. D., Fellers, R. T., Greer, J. B., Romanova, E. V., Rubakhin, S. S., Tai, R., Thomas, P. M., Sweedler, J. V., Kelleher, N. L., Patrie, S. M. & Lasek, A. W., Nov 1 2019, In : Journal of Proteome Research. 18, 11, p. 3999-4012 14 p.

Research output: Contribution to journalArticle

Cocaine
Proteomics
Estradiol
Brain
Estrogens
2010

The zebra finch neuropeptidome: Prediction, detection and expression

Xie, F., London, S. E., Southey, B. R., Annangudi, S. P., Amare, A., Rodriguez-Zas, S. L., Clayton, D. F. & Sweedler, J. V., Apr 1 2010, In : BMC biology. 8, 28.

Research output: Contribution to journalArticle

Finches
Taeniopygia guttata
Equidae
peptide
learning
2013

Signals from the Brainstem Sleep/Wake Centers Regulate Behavioral Timing via the Circadian Clock

Abbott, S. M., Arnold, J. M., Chang, Q., Miao, H., Ota, N., Cecala, C., Gold, P. E., Sweedler, J. V. & Gillette, M. L., Aug 12 2013, In : PloS one. 8, 8, e70481.

Research output: Contribution to journalArticle

Circadian Clocks
Suprachiasmatic Nucleus
brain stem
sleep
circadian rhythm
2010

A mass spectrometry primer for mass spectrometry imaging

Rubakhin, S. S. & Sweedler, J. V., Dec 1 2010, Mass Spectrometry Imaging: Principles and Protocols. Rubakhin, S. & Sweedler, J. (eds.). p. 21-49 29 p. (Methods in Molecular Biology; vol. 656).

Research output: Chapter in Book/Report/Conference proceedingChapter

Tandem Mass Spectrometry
Mass Spectrometry
Molecular Biology
Research Personnel
Guidelines
2013

Stimulation and release from neurons via a dual capillary collection device interfaced to mass spectrometry

Fan, Y., Lee, C. Y., Rubakhin, S. S. & Sweedler, J. V., Nov 7 2013, In : Analyst. 138, 21, p. 6337-6346 10 p.

Research output: Contribution to journalArticle

peptide
Peptides
Neurons
Mass spectrometry
Mass Spectrometry
2012

Peptidomic analyses of mouse astrocytic cell lines and rat primary cultured astrocytes

Yin, P., Knolhoff, A. M., Rosenberg, H. J., Millet, L. J., Gillette, M. U. & Sweedler, J. V., Aug 3 2012, In : Journal of Proteome Research. 11, 8, p. 3965-3973 9 p.

Research output: Contribution to journalArticle

Astrocytes
Rats
Cells
Cell Line
Peptides
2013

Multifactorial understanding of ion abundance in tandem mass spectrometry experiments

Fazal, Z., Southey, B. R., Sweedler, J. V. & Rodriguez-Zas, S. L., Mar 12 2013, In : Journal of Proteomics and Bioinformatics. 6, 2, p. 23-29 7 p.

Research output: Contribution to journalArticle

Tandem Mass Spectrometry
Mass spectrometry
Ions
Peptides
Experiments
2012

Mass spectrometry imaging and profiling of single cells

Lanni, E. J., Rubakhin, S. & Sweedler, J. V., Aug 30 2012, In : Journal of Proteomics. 75, 16, p. 5036-5051 16 p.

Research output: Contribution to journalReview article

Mass spectrometry
Secondary Ion Mass Spectrometry
Mass Spectrometry
Matrix-Assisted Laser Desorption-Ionization Mass Spectrometry
Imaging techniques
2019

Salami Publications and Duplicate Submissions: Put Them on Your List of Things to Avoid

Sweedler, J. V., Mar 5 2019, In : Analytical chemistry. 91, 5, p. 3177-3178 2 p.

Research output: Contribution to journalEditorial

2018

Who Are Your Coauthors? Make Sure to Follow Appropriate Practices

Sweedler, J. V., Mar 6 2018, In : Analytical chemistry. 90, 5, p. 2977-2978 2 p.

Research output: Contribution to journalEditorial

2012

Now it is a highlight, not an acceleration

Sweedler, J. V., Sep 4 2012, In : Analytical chemistry. 84, 17, 1 p.

Research output: Contribution to journalEditorial

2010
Mass Screening
Prefrontal Cortex
Cocaine
Mass Spectrometry
Peptides
2011

The mechanical sensitivity of vesicle dynamics in in vivo and in vitro neurons

Ahmed, W. W., Li, T. C., Rubakhin, S., Chiba, A., Sweedler, J. V. & Saif, M. T. A., Nov 23 2011, Technical Proceedings of the 2011 NSTI Nanotechnology Conference and Expo, NSTI-Nanotech 2011. p. 436-439 4 p. (Technical Proceedings of the 2011 NSTI Nanotechnology Conference and Expo, NSTI-Nanotech 2011; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Neurons
Cones
Imaging techniques
Compaction
2012

An enhanced protein crosslink identification strategy using CID-cleavable chemical crosslinkers and LC/MS n analysis

Liu, F., Wu, C., Sweedler, J. V. & Goshe, M. B., Feb 1 2012, In : Proteomics. 12, 3, p. 401-405 5 p.

Research output: Contribution to journalComment/debate

Peptides
aspartyl-proline
Proteins
Cross-Linking Reagents
Optical resolving power
2011

Comparison of tandem mass spectrometry search methods to identify neuropeptides

Akhtar, M. N., Southey, B. R., Porter, K. I., Sweedler, J. V. & Rodriguez-Zas, S. L., Dec 1 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011. p. 982-984 3 p. 6112530. (2011 IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW 2011).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Tandem Mass Spectrometry
Neuropeptides
Mass spectrometry
Peptides
Amino acids
2018

Where Is the Data?

Sweedler, J. V., Aug 7 2018, In : Analytical chemistry. 90, 15, 1 p.

Research output: Contribution to journalEditorial

Trigeminal Nuclei
Trigeminal Ganglion
Gene Regulatory Networks
Hyperalgesia
Nucleus Accumbens

Expired Epinephrine Maintains Chemical Concentration and Sterility

Weir, W. B., Fred, L. Y., Pike, M., Rubakhin, S. S., Ludwig, T. J., Shar, A. M., Zhu, L., Frederick, A., Uzoaru, I., Wang, L. & Sweedler, J. V., Jul 4 2018, In : Prehospital Emergency Care. 22, 4, p. 414-418 5 p.

Research output: Contribution to journalArticle

Infertility
Epinephrine
Syringes
Emergency Medical Services
Magnetic Resonance Spectroscopy
2016

Single-cell analysis at the threshold

Chen, X., Love, J. C., Navin, N. E., Pachter, L., Stubbington, M. J. T., Svensson, V., Sweedler, J. V. & Teichmann, S. A., Nov 8 2016, In : Nature Biotechnology. 34, 11, p. 1111-1118 8 p.

Research output: Contribution to journalReview article

Microfluidics
Metabolomics
2012

Two unrelated items to avoid, one for me and one for you

Sweedler, J. V., Jun 5 2012, In : Analytical chemistry. 84, 11, p. 4635-4636 2 p.

Research output: Contribution to journalEditorial

2015
Acetylcholine
Serotonin
Electrodes
Liquids
Neurotransmitter Agents