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2015

Graphene-Based Platform for Infrared Near-Field Nanospectroscopy of Water and Biological Materials in an Aqueous Environment

Khatib, O., Wood, J. D., McLeod, A. S., Goldflam, M. D., Wagner, M., Damhorst, G. L., Koepke, J. C., Doidge, G. P., Rangarajan, A., Bashir, R., Pop, E., Lyding, J. W., Thiemens, M. H., Keilmann, F. & Basov, D. N., Aug 25 2015, In : ACS Nano. 9, 8, p. 7968-7975 8 p.

Research output: Contribution to journalArticle

Graphite
Biological materials
Graphene
near fields
graphene

Engineering as a new frontier for translational medicine

Chien, S., Bashir, R., Nerem, R. M. & Pettigrew, R., Apr 1 2015, In : Science Translational Medicine. 7, 281, 281fs13.

Research output: Contribution to journalArticle

Translational Medical Research
Medicine
Delivery of Health Care
Therapeutics

Microfluidics and Nanotechnology for Detection of Global Infectious Diseases

Damhorst, G. L., Murtagh, M., Rodriguez, W. R. & Bashir, R., Feb 1 2015, In : Proceedings of the IEEE. 103, 2, p. 150-160 11 p., 7067024.

Research output: Contribution to journalReview article

Nanotechnology
Microfluidics
Viruses
Pathogens
Industry
2014

Nano/micro and spectroscopic approaches to food pathogen detection

Cho, I. H., Radadia, A. D., Farrokhzad, K., Ximenes, E., Bae, E., Singh, A. K., Oliver, H., Ladisch, M., Bhunia, A., Applegate, B., Mauer, L., Bashir, R. & Irudayaraj, J., Jun 2014, In : Annual Review of Analytical Chemistry. 7, p. 65-88 24 p.

Research output: Contribution to journalReview article

Pathogens
Bacteriophages
Biosensors
Light scattering
Explosions
2013

Effect of biointerfacing linker chemistries on the sensitivity of silicon nanowires for protein detection

Dorvel, B., Reddy, B. & Bashir, R., Oct 15 2013, In : Analytical chemistry. 85, 20, p. 9493-9500 8 p.

Research output: Contribution to journalArticle

Silicon
Nanowires
Proteins
Oxides
Antigens
2010

Three-dimensional photopatterning of hydrogels using stereolithography for long-term cell encapsulation

Chan, V., Zorlutuna, P., Jeong, J. H., Kong, H. & Bashir, R., Aug 21 2010, In : Lab on a chip. 10, 16, p. 2062-2070 9 p.

Research output: Contribution to journalArticle

Stereolithography
Hydrogels
Encapsulation
Polyethylene glycols
Molecular Weight

Piezoresistive microcantilevers from ultrananocrystalline diamond

Privorotskaya, N. L., Zeng, H., Carlisle, J. A., Bashir, R. & King, W. P., Jan 1 2010, 2010 Solid-State Sensors, Actuators, and Microsystems Workshop. Monk, D. J. & Turner, K. L. (eds.). Transducer Research Foundation, p. 250-253 4 p. (Technical Digest - Solid-State Sensors, Actuators, and Microsystems Workshop).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Diamonds
Boron
Temperature
Acoustic impedance
Microsystems
2014

Utilization and control of bioactuators across multiple length scales

Chan, V., Asada, H. H. & Bashir, R., Feb 21 2014, In : Lab on a chip. 14, 4, p. 653-670 18 p.

Research output: Contribution to journalReview article

Tissue
Muscle
Cells
Protozoa
Kinesin
2013

Micro- and nanotechnology for HIV/AIDS diagnostics in resource-limited settings

Damhorst, G. L., Watkins, N. N. & Bashir, R., Oct 1 2013, In : IEEE Transactions on Biomedical Engineering. 60, 3, p. 715-726 12 p.

Research output: Contribution to journalReview article

Viruses
Nanotechnology
T-cells
Immune system
Blood

On-chip magnetic separation and encapsulation of cells in droplets

Chen, A., Byvank, T., Chang, W. J., Bharde, A., Vieira, G., Miller, B. L., Chalmers, J. J., Bashir, R. & Sooryakumar, R., Mar 21 2013, In : Lab on a chip. 13, 6, p. 1172-1181 10 p.

Research output: Contribution to journalArticle

Magnetic separation
Cell Separation
Encapsulation
Sorting
Contamination
2011

On a chip

Watkins, N., Irimia, D., Toner, M. & Bashir, R., Nov 1 2011, In : IEEE Pulse. 2, 6, p. 19-27 9 p., 6088930.

Research output: Contribution to journalArticle

Emergency rooms
Ambulances
MEMS
Health

Surface immobilizable chelator for label-free electrical detection of pyrophosphate

Liu, D. J., Credo, G. M., Su, X., Wu, K., Lim, H. C., Elibol, O. H., Bashir, R. & Varma, M., Aug 7 2011, In : Chemical Communications. 47, 29, p. 8310-8312 3 p.

Research output: Contribution to journalArticle

Chelating Agents
Labels
Silicon
Field effect transistors
Sensors

Independent control stiffness and permeability of a cell-encapsulating hydrogel; integration of bio-inspired material chemistry and microfabrication

Jeong, J. H., Chan, V., Cha, C., Zorlutuna, P., Bashir, R. & Kong, H. J., Jan 1 2011, Materials Engineering and Sciences Division - Core Programming Topic at the 2011 AIChE Annual Meeting. AIChE, Vol. 2. 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

permeability
Hydrogel
Microfabrication
Hydrogels
chemistry
2016

Optogenetic skeletal muscle-powered adaptive biological machines

Raman, R., Cvetkovic, C., Uzel, S. G. M., Platt, R. J., Sengupta, P., Kamm, R. D. & Bashir, R., Mar 29 2016, In : Proceedings of the National Academy of Sciences of the United States of America. 113, 13, p. 3497-3502 6 p.

Research output: Contribution to journalArticle

Optogenetics
Bioengineering
Locomotion
Skeleton
Skeletal Muscle
2012

Characterization of mass and swelling of hydrogel microstructures using MEMS resonant mass sensor arrays

Millet, L. J., Corbin, E. A., Free, R., Park, K., Kong, H., King, W. P. & Bashir, R., Aug 20 2012, In : Small. 8, 16, p. 2555-2562 8 p.

Research output: Contribution to journalArticle

Hydrogels
Hydrogel
Sensor arrays
MEMS
Swelling
2014

Creating living cellular machines

Kamm, R. D. & Bashir, R., Feb 2014, In : Annals of Biomedical Engineering. 42, 2, p. 445-459 15 p.

Research output: Contribution to journalArticle

Microfabrication
Nanotechnology
Scaffolds
Self assembly
Chemical properties

New technologies for measuring single cell mass

Popescu, G., Park, K., Mir, M. & Bashir, R., Feb 21 2014, In : Lab on a chip. 14, 4, p. 646-652 7 p.

Research output: Contribution to journalReview article

Cells
Technology
Imaging techniques
Sensors
Medicine
2013

Enabling microscale and nanoscale approaches for bioengineered cardiac tissue

Chan, V., Raman, R., Cvetkovic, C. & Bashir, R., Mar 26 2013, In : ACS Nano. 7, 3, p. 1830-1837 8 p.

Research output: Contribution to journalArticle

microbalances
Tissue
Carbon Nanotubes
Methacrylates
gelatins
2016

Electrical Chips for Biological Point-of-Care Detection

Reddy, B., Salm, E. & Bashir, R., Jul 11 2016, In : Annual Review of Biomedical Engineering. 18, p. 329-355 27 p.

Research output: Contribution to journalReview article

Point-of-Care Systems
Biochips
Lab-on-a-chip
Multiplexing
Health care
2012

Silicon nanowires with high-k hafnium oxide dielectrics for sensitive detection of small nucleic acid oligomers

Dorvel, B. R., Reddy, B., Go, J., Duarte Guevara, C., Salm, E., Alam, M. A. & Bashir, R., Jul 24 2012, In : ACS Nano. 6, 7, p. 6150-6164 15 p.

Research output: Contribution to journalArticle

Hafnium oxides
hafnium oxides
Nucleic acids
nucleic acids
Silicon
2015

Fabrication and characterization of optogenetic, multi-strip cardiac muscles

Chan, V., Neal, D. M., Uzel, S. G. M., Kim, H., Bashir, R. & Asada, H. H., May 21 2015, In : Lab on a chip. 15, 10, p. 2258-2268 11 p.

Research output: Contribution to journalArticle

Optogenetics
Muscle
Myocardium
Fabrication
Tissue engineering
2017

A point-of-care microfluidic biochip for quantification of CD64 expression from whole blood for sepsis stratification

Hassan, U., Ghonge, T., Reddy, B., Patel, M., Rappleye, M., Taneja, I., Tanna, A., Healey, R., Manusry, N., Price, Z., Jensen, T., Berger, J., Hasnain, A., Flaugher, E., Liu, S., Davis, B., Kumar, J., White, K. & Bashir, R., Jul 3 2017, In : Nature communications. 8, 15949.

Research output: Contribution to journalArticle

Point-of-Care Systems
Biochips
leukocytes
Microfluidics
stratification
2015

Tip-based nanofabrication of arbitrary shapes of graphene nanoribbons for device applications

Hu, H., Banerjee, S., Estrada, D., Bashir, R. & King, W. P., Jan 1 2015, In : RSC Advances. 5, 46, p. 37006-37012 7 p.

Research output: Contribution to journalArticle

Nanoribbons
Carbon Nanotubes
Graphite
Nanotechnology
Graphene
2014

Electrical cell counting process characterization in a microfluidic impedance cytometer

Hassan, U. & Bashir, R., Jan 1 2014, In : Biomedical microdevices. 16, 5, p. 697-704 8 p.

Research output: Contribution to journalArticle

Microfluidics
Electric Impedance
Dilution
Blood
Lab-On-A-Chip Devices
2013

A liposome-based ion release impedance sensor for biological detection

Damhorst, G. L., Smith, C. E., Salm, E. M., Sobieraj, M. M., Ni, H., Kong, H. & Bashir, R., Oct 1 2013, In : Biomedical microdevices. 15, 5, p. 895-905 11 p.

Research output: Contribution to journalArticle

Liposomes
Electric Impedance
Biomolecules
Pathogens
Ions
2014

Measuring physical properties of neuronal and glial cells with resonant microsensors

Corbin, E. A., Millet, L. J., Keller, K. R., King, W. P. & Bashir, R., May 20 2014, In : Analytical chemistry. 86, 10, p. 4864-4872 9 p.

Research output: Contribution to journalArticle

Microsensors
Physical properties
Sensors
MEMS
Cells
2013

Ultralocalized thermal reactions in subnanoliter droplets-in-air

Salm, E., Guevara, C. D., Dak, P., Dorvel, B. R., Reddy, B., Alam, M. A. & Bashir, R., Feb 26 2013, In : Proceedings of the National Academy of Sciences of the United States of America. 110, 9, p. 3310-3315 6 p.

Research output: Contribution to journalArticle

Hot Temperature
Air
Nucleic Acid Denaturation
Temperature
Silicon
2010

Stiffness of the substrate influences the phenotype of embryonic chicken cardiac myocytes

Bajaj, P., Tang, X., Saif, T. A. & Bashir, R., Dec 15 2010, In : Journal of Biomedical Materials Research - Part A. 95, 4, p. 1261-1269 9 p.

Research output: Contribution to journalArticle

Tissue culture
Stiffness
Polyacrylates
Substrates
Adhesion
2019

Long-Term Cryopreservation and Revival of Tissue-Engineered Skeletal Muscle

Grant, L., Raman, R., Cvetkovic, C., Ferrall-Fairbanks, M. C., Pagan-Diaz, G. J., Hadley, P., Ko, E., Platt, M. O. & Bashir, R., Jul 1 2019, In : Tissue Engineering - Part A. 25, 13-14, p. 1023-1036 14 p.

Research output: Contribution to journalArticle

Cryopreservation
Muscle
Skeletal Muscle
Tissue
Freezing
2014

Coincidence detection of heterogeneous cell populations from whole blood with coplanar electrodes in a microfluidic impedance cytometer

Hassan, U. & Bashir, R., Nov 21 2014, In : Lab on a chip. 14, 22, p. 4370-4381 12 p.

Research output: Contribution to journalArticle

Microfluidics
Electric Impedance
Electrodes
Blood
Cells
2019

Matrix Topography Regulates Synaptic Transmission at the Neuromuscular Junction

Ko, E., Yu, S. J., Pagan-Diaz, G. J., Mahmassani, Z., Boppart, M. D., Im, S. G., Bashir, R. & Kong, H., Mar 20 2019, In : Advanced Science. 6, 6, 1801521.

Research output: Contribution to journalArticle

Neuromuscular Junction
Skeletal Muscle Fibers
Synaptic Transmission
Topography
topography
2011

High-k dielectric Al2O3 nanowire and nanoplate field effect sensors for improved pH sensing

Reddy, B., Dorvel, B. R., Go, J., Nair, P. R., Elibol, O. H., Credo, G. M., Daniels, J. S., Chow, E. K. C., Su, X., Varma, M., Alam, M. A. & Bashir, R., Apr 1 2011, In : Biomedical microdevices. 13, 2, p. 335-344 10 p.

Research output: Contribution to journalArticle

Nanowires
Gate dielectrics
Field effect transistors
Equipment and Supplies
Sensors

Separating beads and cells in multi-channel microfluidic devices using dielectrophoresis and laminar flow

Millet, L. J., Park, K., Watkins, N. N., Jimmy Hsia, K. & Bashir, R., Feb 2011, In : Journal of Visualized Experiments. 48, e2545.

Research output: Contribution to journalArticle

Lab-On-A-Chip Devices
Electrophoresis
Laminar flow
Microfluidics
Fluidics
2010

Fabrication of silicon nanoplate and nanowire biosensor arrays with high specificity and sub-picomolar limits of detection

Dorvel, B., Reddy, B., Bergstrom, D., Alam, M. A., Clare, S. & Bashir, R., Dec 1 2010, 14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010. p. 1871-1873 3 p. (14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Field effect transistors
Biosensors
Nanowires
Fabrication
Silicon

Localized heating on silicon field effect transistors for bio-chemical reactions

Reddy, B., Elibol, O. H., Nair, P. R., Dorvel, B. R., Bergstrom, D., Alam, M. A. & Bashir, R., Dec 1 2010, 14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010. p. 1163-1165 3 p. (14th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2010, MicroTAS 2010; vol. 2).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Field effect transistors
Chemical reactions
Transistors
Heating
Silicon
2018

Pixelated spatial gene expression analysis from tissue

Ganguli, A., Ornob, A., Spegazzini, N., Liu, Y., Damhorst, G., Ghonge, T., Thornton, B., Konopka, C. J., Dobrucki, W., Clare, S. E., Bhargava, R., Smith, A. M., Kosari, F. & Bashir, R., Dec 1 2018, In : Nature communications. 9, 1, 202.

Research output: Contribution to journalArticle

gene expression
Gene expression
Tissue
Gene Expression
ribonucleic acids
2011

Inverse-extraordianry optoconductance in Ti/Au/GaAs hybrid structures

Newaz, A. K. M., Chang, W. J., Wallace, K. D., Wickline, S. A., Bashir, R., Gilbertson, A. M., Cohen, L. F., Edge, L. C. & Solin, S. A., Dec 1 2011, Physics of Semiconductors - 30th International Conference on the Physics of Semiconductors, ICPS-30. p. 973-974 2 p. (AIP Conference Proceedings; vol. 1399).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

hybrid structures
metals
luminous intensity
photons
2012

Graphene nanopores for nucleic acid analysis

Shim, J., Solovyeva, V., Estrada, D., Banerjee, S., Rivera, J., Pop, E. & Bashir, R., 2012, 2012 12th IEEE International Conference on Nanotechnology, NANO 2012. 6322237

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nanopores
Graphite
Nucleic acids
nucleic acids
Graphene
2018

Point-of-care sensors for the management of sepsis

Reddy, B., Hassan, U., Seymour, C., Angus, D. C., Isbell, T. S., White, K., Weir, W., Yeh, L., Vincent, A. & Bashir, R., Sep 1 2018, In : Nature biomedical engineering. 2, 9, p. 640-648 9 p.

Research output: Contribution to journalReview article

Point-of-Care Systems
Sepsis
Health
Sensors
Infection
2012

Label-free electrical detection of pyrophosphate generated from DNA polymerase reactions on field-effect devices

Credo, G. M., Su, X., Wu, K., Elibol, O. H., Liu, D. J., Reddy, B., Tsai, T. W., Dorvel, B. R., Daniels, J. S., Bashir, R. & Varma, M., Mar 21 2012, In : Analyst. 137, 6, p. 1351-1362 12 p.

Research output: Contribution to journalArticle

Labels
DNA
Chelating Agents
sensor
Equipment and Supplies
2013

Detection and quantification of methylation in DNA using solid-state nanopores

Shim, J., Humphreys, G. I., Venkatesan, B. M., Munz, J. M., Zou, X., Sathe, C., Schulten, K., Kosari, F., Nardulli, A. M., Vasmatzis, G. & Bashir, R., Mar 25 2013, In : Scientific reports. 3, 1389.

Research output: Contribution to journalArticle

Nanopores
DNA Methylation
Methylation
Epigenomics
5-Methylcytosine
2019

Monolayer MoS 2 Nanoribbon Transistors Fabricated by Scanning Probe Lithography

Chen, S., Kim, S., Chen, W., Yuan, J., Bashir, R., Lou, J., van der Zande, A. & King, W. P., Mar 13 2019, In : Nano letters. 19, 3, p. 2092-2098 7 p.

Research output: Contribution to journalArticle

Nanoribbons
Carbon Nanotubes
Lithography
Monolayers
Transistors
2012

Mechanical communication between cardiac cell leads to synchrony in beating

Tang, X., Bajaj, P., Bashir, R. & Saif, T., Dec 1 2012, ASME 2012 Summer Bioengineering Conference, SBC 2012. p. 333-334 2 p. (ASME 2012 Summer Bioengineering Conference, SBC 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Elastic moduli
Stiffness
Communication
2013

Cardiomyocyte Imaging Using Real-Time Spatial Light Interference Microscopy (SLIM)

Bhaduri, B., Wickland, D., Wang, R., Chan, V., Bashir, R. & Popescu, G., Feb 15 2013, In : PloS one. 8, 2, e56930.

Research output: Contribution to journalArticle

Interference Microscopy
Light interference
crossover interference
Cardiac Myocytes
Liquid Crystals
2017

Damage, Healing, and Remodeling in Optogenetic Skeletal Muscle Bioactuators

Raman, R., Grant, L., Seo, Y., Cvetkovic, C., Gapinske, M., Palasz, A., Dabbous, H., Kong, H., Pinera, P. P. & Bashir, R., Jun 21 2017, In : Advanced Healthcare Materials. 6, 12, 1700030.

Research output: Contribution to journalArticle

Optogenetics
Muscle
Skeletal Muscle
Technology
Psychological Adaptation
2016

Microfluidic differential immunocapture biochip for specific leukocyte counting

Hassan, U., Watkins, N. N., Reddy, B., Damhorst, G. & Bashir, R., Apr 1 2016, In : Nature Protocols. 11, 4, p. 714-726 13 p.

Research output: Contribution to journalArticle

Biochips
Microfluidics
Biosensors
Leukocytes
Biosensing Techniques
2014

Dissolution chemistry and biocompatibility of single-crystalline silicon nanomembranes and associated materials for transient electronics

Hwang, S. W., Park, G., Edwards, C., Corbin, E. A., Kang, S. K., Cheng, H., Song, J. K., Kim, J. H., Yu, S., Ng, J., Lee, J. E., Kim, J., Yee, C., Bhaduri, B., Omennetto, F. G., Huang, Y., Bashir, R., Goddard, L., Popescu, G., Lee, K. M. & 1 others, Rogers, J. A., Jun 24 2014, In : ACS Nano. 8, 6, p. 5843-5851 9 p.

Research output: Contribution to journalArticle

biocompatibility
Silicon
Biocompatibility
dissolving
Dissolution
2010

Vapor-phase deposition of monofunctional alkoxysilanes for sub-nanometer-level biointerfacing on silicon oxide surfaces

Dorvel, B., Block, I., Reddy, B., Mathias, P., Clare, S. E., Cunningham, B., Bergstrom, D. E. & Bashir, R., Jan 8 2010, In : Advanced Functional Materials. 20, 1, p. 87-95 9 p.

Research output: Contribution to journalArticle

Silanes
Silicon oxides
silicon oxides
silanes
Monolayers
2013

Microfluidic CD4+ and CD8+ T lymphocyte counters for point-of-care HIV diagnostics using whole blood

Watkins, N. N., Hassan, U., Damhorst, G., Ni, H., Vaid, A., Rodriguez, W. & Bashir, R., Dec 4 2013, In : Science Translational Medicine. 5, 214, 214ra170.

Research output: Contribution to journalArticle

Point-of-Care Systems
Microfluidics
HIV
T-Lymphocytes
Equipment and Supplies