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Publication Year

  • 2018
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Author

  • Joseph Maria Kumar Irudayaraj
2015

Inside single cells: Quantitative analysis with advanced optics and nanomaterials

Cui, Y. & Irudayaraj, J., May 1 2015, In : Wiley Interdisciplinary Reviews: Nanomedicine and Nanobiotechnology. 7, 3, p. 387-407 21 p.

Research output: Contribution to journalReview article

2010

Microscopic and spectroscopic evaluation of inactivation of staphylococcus aureus by pulsed UV light and infrared heating

Krishnamurthy, K., Tewari, J. C., Irudayaraj, J. & Demirci, A., Jan 1 2010, In : Food and Bioprocess Technology. 3, 1, p. 93-104 12 p.

Research output: Contribution to journalArticle

2017

Multiplex single-cell quantification of rare RNA transcripts from protoplasts in a model plant system

Kadam, U. S., Schulz, B. & Irudayaraj, J. M. K., Jun 2017, In : Plant Journal. 90, 6, p. 1187-1195 9 p.

Research output: Contribution to journalArticle

2011

Quantification of receptor targeting aptamer binding characteristics using single-molecule spectroscopy

Book, B., Chen, J. & Irudayaraj, J., May 1 2011, In : Biotechnology and bioengineering. 108, 5, p. 1222-1227 6 p.

Research output: Contribution to journalLetter

2012

FTIR nanobiosensors for Escherichia coli detection

Mura, S., Greppi, G., Marongiu, M. L., Roggero, P. P., Ravindranath, S. P., Mauer, L. J., Schibeci, N., Perria, F., Piccinini, M., Innocenzi, P. & Irudayaraj, J., 2012, In : Beilstein Journal of Nanotechnology. 3, 1, p. 485-492 8 p.

Research output: Contribution to journalArticle

2016

CRISPR-dCas9 mediated TET1 targeting for selective DNA demethylation at BRCA1 promoter

Choudhury, S. R., Cui, Y., Lubecka, K., Stefanska, B. & Irudayaraj, J., 2016, In : Oncotarget. 7, 29, p. 46545-46556 12 p.

Research output: Contribution to journalArticle

2017

Highly sensitive fluorescence sensing of zearalenone using a novel aptasensor based on upconverting nanoparticles

Wu, Z., Xu, E., Chughtai, M. F. J., Jin, Z. & Irudayaraj, J., Sep 1 2017, In : Food chemistry. 230, p. 673-680 8 p.

Research output: Contribution to journalArticle

2016

Mitochondrial Dysfunction, Disruption of F-Actin Polymerization, and Transcriptomic Alterations in Zebrafish Larvae Exposed to Trichloroethylene

Wirbisky, S. E., Damayanti, N. P., Mahapatra, C. T., Sepúlveda, M. S., Irudayaraj, J. & Freeman, J. L., Feb 15 2016, In : Chemical Research in Toxicology. 29, 2, p. 169-179 11 p.

Research output: Contribution to journalArticle

2017

A net fishing enrichment strategy for colorimetric detection of E. coli O157:H7

Ren, W., Liu, W. & Irudayaraj, J., 2017, In : Sensors and Actuators, B: Chemical. 247, p. 923-929 7 p.

Research output: Contribution to journalArticle

2013

Pattern recognition applied to spectroscopy: Conventional methods and future directions

Craig, A. P., Franca, A. S. & Irudayaraj, J., Mar 1 2013, Pattern Recognition: Practices, Perspectives and Challenges. Nova Science Publishers, Inc., p. 1-45 45 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

Fluorescence lifetime imaging of biosensor peptide phosphorylation in single live cells

Damayanti, N. P., Parker, L. L. & Irudayaraj, J. M. K., Apr 2 2013, In : Angewandte Chemie - International Edition. 52, 14, p. 3931-3934 4 p.

Research output: Contribution to journalArticle

2017

Toxicological effects of trichloroethylene exposure on immune disorders

Ordaz, J. D., Damayanti, N. P. & Irudayaraj, J. M. K., Nov 2 2017, In : Immunopharmacology and Immunotoxicology. 39, 6, p. 305-317 13 p.

Research output: Contribution to journalReview article

2015
2012
2013
2014

Raman spectroscopy

Kizil, R. & Irudayaraj, J., 2014, Food Engineering Series. Springer, p. 103-134 32 p. (Food Engineering Series).

Research output: Chapter in Book/Report/Conference proceedingChapter

2011

Single molecule In Vivo analysis of toll-like receptor 9 and CpG DNA interaction

Chen, J., Nag, S., Vidi, P. A. & Irudayaraj, J., 2011, In : PloS one. 6, 4, e17991.

Research output: Contribution to journalArticle

2014

MRNA quantification via second harmonic super resolution microscopy

Liu, J., Cho, I. H., Kadam, U. & Irudayaraj, J., Jan 1 2014, Single Molecule Spectroscopy and Superresolution Imaging VII. SPIE, 89500N. (Progress in Biomedical Optics and Imaging - Proceedings of SPIE; vol. 8950).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2015

Single-Cell Quantification of Cytosine Modifications by Hyperspectral Dark-Field Imaging

Wang, X., Cui, Y. & Irudayaraj, J., Oct 27 2015, In : ACS Nano. 9, 12, p. 11924-11932 9 p.

Research output: Contribution to journalArticle

Functionalized gold nanoparticles for the detection of nitrates in water

Mura, S., Greppi, G., Roggero, P. P., Musu, E., Pittalis, D., Carletti, A., Ghiglieri, G. & Irudayaraj, J., Jan 1 2015, In : International Journal of Environmental Science and Technology. 12, 3, p. 1021-1028 8 p.

Research output: Contribution to journalArticle

Enhancement of single-photon emission from nitrogen-vacancy centers with TiN/(Al,Sc)N hyperbolic metamaterial

Shalaginov, M. Y., Vorobyov, V. V., Liu, J., Ferrera, M., Akimov, A. V., Lagutchev, A., Smolyaninov, A. N., Klimov, V. V., Irudayaraj, J., Kildishev, A. V., Boltasseva, A. & Shalaev, V. M., Jan 1 2015, In : Laser and Photonics Reviews. 9, 1, p. 120-127 8 p.

Research output: Contribution to journalArticle

2011

Innovative Composite Films of Chitosan, Methylcellulose, and Nanoparticles

Mura, S., Corrias, F., Stara, G., Piccinini, M., Secchi, N., Marongiu, D., Innocenzi, P., Irudayaraj, J. & Greppi, G. F., Sep 1 2011, In : Journal of food science. 76, 7, p. N54-N60

Research output: Contribution to journalArticle

2015

High performance immunochromatographic assay combined with surface enhanced Raman spectroscopy

Cho, I. H., Das, M., Bhandari, P. & Irudayaraj, J., Jul 5 2015, In : Sensors and Actuators, B: Chemical. 213, p. 209-214 6 p.

Research output: Contribution to journalArticle

2010

Silver nanosphere SERS probes for sensitive identification of pathogens

Wang, Y., Lee, K. & Irudayaraj, J., Oct 7 2010, In : Journal of Physical Chemistry C. 114, 39, p. 16122-16128 7 p.

Research output: Contribution to journalArticle

2015

Fourier transform infrared spectroscopy and near infrared spectroscopy for the quantification of defects in roasted coffees

Craig, A. P., Franca, A. S., Oliveira, L. S., Irudayaraj, J. & Ileleji, K., Mar 1 2015, In : Talanta. 134, p. 379-386 8 p.

Research output: Contribution to journalArticle

2017

PLGA-PEG nano-delivery system for epigenetic therapy

Naz, A., Cui, Y., Collins, C. J., Thompson, D. H. & Irudayaraj, J., Jun 1 2017, In : Biomedicine and Pharmacotherapy. 90, p. 586-597 12 p.

Research output: Contribution to journalArticle

2011

Gold nanoprobes for theranostics

Panchapakesan, B., Book-Newell, B., Sethu, P., Rao, M. & Irudayaraj, J., Dec 2011, In : Nanomedicine. 6, 10, p. 1787-1811 25 p.

Research output: Contribution to journalReview article

2012

Opto-electrokinetic manipulation for high-performance on-chip bioassays

Kwon, J. S., Ravindranath, S. P., Kumar, A., Irudayaraj, J. & Wereley, S. T., Dec 7 2012, In : Lab on a chip. 12, 23, p. 4955-4959 5 p.

Research output: Contribution to journalArticle

2015

Selective increase in subtelomeric DNA methylation: An epigenetic biomarker for malignant glioma

Choudhury, S. R., Cui, Y., Milton, J. R., Li, J. & Irudayaraj, J., Oct 7 2015, In : Clinical epigenetics. 7, 1, 107.

Research output: Contribution to journalArticle

Decitabine nanoconjugate sensitizes human glioblastoma cells to temozolomide

Cui, Y., Naz, A., Thompson, D. H. & Irudayaraj, J., Apr 6 2015, In : Molecular pharmaceutics. 12, 4, p. 1279-1288 10 p.

Research output: Contribution to journalArticle

2013
2011

Protein-directed reduction of graphene oxide and intracellular imaging

Guo, C., Book-Newell, B. & Irudayaraj, J., Dec 21 2011, In : Chemical Communications. 47, 47, p. 12658-12660 3 p.

Research output: Contribution to journalArticle

2010

Proliferating Cell Nuclear Antigen (PCNA) is required for cell cycle-regulated silent chromatin on replicated and nonreplicated genes

Miller, A., Chen, J., Takasuka, T. E., Jacobi, J. L., Kaufman, P. D., Irudayaraj, J. M. K. & Kirchmaier, A. L., Nov 5 2010, In : Journal of Biological Chemistry. 285, 45, p. 35142-35154 13 p.

Research output: Contribution to journalArticle

2017

A reusable laser wrapped graphene-Ag array based SERS sensor for trace detection of genomic DNA methylation

Ouyang, L., Hu, Y., Zhu, L., Cheng, G. J. & Irudayaraj, J., Jun 15 2017, In : Biosensors and Bioelectronics. 92, p. 755-762 8 p.

Research output: Contribution to journalArticle

2013

Probing site-exclusive binding of aqueous QDs and their organelle-dependent dynamics in live cells by single molecule spectroscopy

Dong, C., Chowdhury, B. & Irudayaraj, J., May 21 2013, In : Analyst. 138, 10, p. 2871-2876 6 p.

Research output: Contribution to journalArticle

2018

Alpha Lead Oxide (α-PbO): A New 2D Material with Visible Light Sensitivity

Kumar, P., Liu, J., Ranjan, P., Hu, Y., Yamijala, S. S. R. K. C., Pati, S. K., Irudayaraj, J. & Cheng, G. J., Mar 22 2018, In : Small. 14, 12, 1703346.

Research output: Contribution to journalArticle

2010

Optical quantification of label-free DNA

Lee, K. & Irudayaraj, J., 2010, In : Optics InfoBase Conference Papers.

Research output: Contribution to journalConference article

Fourier Transform Infrared (FT-IR) spectroscopy coupled with filtration and immunomagnetic separation for the detection of Escherichia coli O157:H7 in ground beef

Davis, R., Burgula, Y., Irudayaraj, J., Reuhs, B. L. & Mauer, L. J., Aug 24 2010, 2010 18th Biennial University/Government/Industry Micro-Nano Symposium, UGIM 2010 - Proceedings. 5508916. (Biennial University/Government/Industry Microelectronics Symposium - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

2016

Superplastic Formation of Metal Nanostructure Arrays with Ultrafine Gaps

Hu, Y., Xuan, Y., Wang, X., Deng, B., Saei, M., Jin, S., Irudayaraj, J. & Cheng, G. J., Jan 1 2016, In : Advanced Materials. 28, 41, p. 9152-9162 11 p.

Research output: Contribution to journalArticle

2011

SERS driven cross-platform based multiplex pathogen detection

Ravindranath, S. P., Wang, Y. & Irudayaraj, J., Mar 1 2011, In : Sensors and Actuators, B: Chemical. 152, 2, p. 183-190 8 p.

Research output: Contribution to journalArticle

2010

SERS aptasensor from nanorod-nanoparticle junction for protein detection

Wang, Y., Lee, K. & Irudayaraj, J., 2010, In : Chemical Communications. 46, 4, p. 613-615 3 p.

Research output: Contribution to journalArticle

2012

Multifunctional gold nanorod theragnostics probed by multi-photon imaging

Book Newell, B., Wang, Y. & Irudayaraj, J., Feb 1 2012, In : European Journal of Medicinal Chemistry. 48, p. 330-337 8 p.

Research output: Contribution to journalArticle

2015

A native chromatin extraction method based on salicylic acid coated magnetic nanoparticles and characterization of chromatin

Zhou, Z. & Irudayaraj, J., Feb 7 2015, In : Analyst. 140, 3, p. 938-944 7 p.

Research output: Contribution to journalArticle

2016

A study of alterations in DNA epigenetic modifications (5mC and 5hmC) and gene expression influenced by simulated microgravity in human lymphoblastoid cells

Chowdhury, B., Seetharam, A., Wang, Z., Liu, Y., Lossie, A. C., Thimmapuram, J. & Irudayaraj, J., Jan 1 2016, In : PloS one. 11, 1, e0147514.

Research output: Contribution to journalArticle

2017
2014

Second harmonic super-resolution microscopy for quantification of mRNA at single copy sensitivity

Liu, J., Cho, I. H., Cui, Y. & Irudayaraj, J., Dec 23 2014, In : ACS Nano. 8, 12, p. 12418-12427 10 p.

Research output: Contribution to journalArticle

2017

Comparative in vitro toxicity assessment of perfluorinated carboxylic acids

Mahapatra, C. T., Damayanti, N. P., Guffey, S. C., Serafin, J. S., Irudayaraj, J. M. K. & Sepúlveda, M. S., Jun 2017, In : Journal of Applied Toxicology. 37, 6, p. 699-708 10 p.

Research output: Contribution to journalArticle

2014

Epitaxial superlattices with titanium nitride as a plasmonic component for optical hyperbolic metamaterials

Naik, G. V., Saha, B., Liu, J., Saber, S. M., Stach, E. A., Irudayaraj, J. M. K., Sands, T. D., Shalaev, V. M. & Boltasseva, A., May 27 2014, In : Proceedings of the National Academy of Sciences of the United States of America. 111, 21, p. 7546-7551 6 p.

Research output: Contribution to journalArticle

2012

Surface enhanced Raman spectroscopy (SERS) for the discrimination of Arthrobacter strains based on variations in cell surface composition

Stephen, K. E., Homrighausen, D., Depalma, G., Nakatsu, C. H. & Irudayaraj, J., Sep 21 2012, In : Analyst. 137, 18, p. 4280-4286 7 p.

Research output: Contribution to journalArticle