Find Research Outputs

2019

Allosteric Interactions in Human Cytochrome P450 CYP3A4: The Role of Phenylalanine 213

Denisov, I. G., Grinkova, Y. V., Nandigrami, P., Shekhar, M., Tajkhorshid, E. & Sligar, S., Mar 12 2019, In : Biochemistry. 58, 10, p. 1411-1422 12 p.

Research output: Contribution to journalArticle

Cytochrome P-450 CYP3A
Phenylalanine
Cytochrome P-450 Enzyme System
Progesterone
Carbamazepine
Stuttering
Aptitude
Preschool Children
Language Development
Child Development

Aluminum: An Asynchronous, GPU-Aware Communication Library Optimized for Large-Scale Training of Deep Neural Networks on HPC Systems

Dryden, N., Maruyama, N., Moon, T., Benson, T., Yoo, A., Snir, M. & Van Essen, B., Feb 8 2019, Proceedings of MLHPC 2018: Machine Learning in HPC Environments, Held in conjunction with SC 2018: The International Conference for High Performance Computing, Networking, Storage and Analysis. Institute of Electrical and Electronics Engineers Inc., p. 1-13 13 p. 8638639. (Proceedings of MLHPC 2018: Machine Learning in HPC Environments, Held in conjunction with SC 2018: The International Conference for High Performance Computing, Networking, Storage and Analysis).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Aluminum
Communication
Bandwidth
Graphics processing unit
Deep neural networks

A massively scalable distributed multigrid framework for nonlinear marine hydrodynamics

Glimberg, S. L., Engsig-Karup, A. P. & Olson, L., Jan 1 2019, In : International Journal of High Performance Computing Applications.

Research output: Contribution to journalArticle

Scalability
Hydrodynamics
Potential Flow
Potential flow
Supercomputers

Amazonian metakaolin reactivity for geopolymer synthesis

Sá Ribeiro, R. A., Sá Ribeiro, M. G., Kutyla, G. P. & Kriven, W. M., Jan 1 2019, In : Advances in Materials Science and Engineering. 2019, 8950764.

Research output: Contribution to journalArticle

Geopolymers
Sodium
Mechanical properties
Potassium
Clay

Ammonia flux measurements above a corn canopy using relaxed eddy accumulation and a flux gradient system

Nelson, A. J., Lichiheb, N., Koloutsou-Vakakis, S., Rood, M. J., Heuer, M., Myles, L. T., Joo, E., Miller, J. & Bernacchi, C., Jan 15 2019, In : Agricultural and Forest Meteorology. 264, p. 104-113 10 p.

Research output: Contribution to journalArticle

flux measurement
eddy
ammonia
maize
canopy

A monitoring-based approach for evaluating dynamic responses of riding vehicle on long-span bridge under strong winds

Wang, H., Mao, J. X. & Spencer, B. F., Jun 15 2019, In : Engineering Structures. 189, p. 35-47 13 p.

Research output: Contribution to journalArticle

Dynamic response
Monitoring
Structural health monitoring
Trucks
Interpolation

A morphological analyzer for St. Lawrence Island / Central Siberian Yupik

Chen, E. & Schwartz, L. O., Jan 1 2019, LREC 2018 - 11th International Conference on Language Resources and Evaluation. Isahara, H., Maegaard, B., Piperidis, S., Cieri, C., Declerck, T., Hasida, K., Mazo, H., Choukri, K., Goggi, S., Mariani, J., Moreno, A., Calzolari, N., Odijk, J. & Tokunaga, T. (eds.). European Language Resources Association (ELRA), p. 2623-2630 8 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

grammar
language
phonology
documentation
Russia

Amorphous nanoparticles by self-assembly: processing for controlled release of hydrophobic molecules

Feng, J., Zhang, Y., McManus, S. A., Qian, R., Ristroph, K. D., Ramachandruni, H., Gong, K., White, C. E., Rawal, A. & Prud'homme, R. K., Jan 1 2019, In : Soft Matter. 15, 11, p. 2400-2410 11 p.

Research output: Contribution to journalArticle

Self assembly
self assembly
Nanoparticles
Zein
nanoparticles

A motion strategy for exploration driven by an automaton activating feedback-based controllers

Martinez, E., Laguna, G., Murrieta-Cid, R., Becerra, H. M., Lopez-Padilla, R. & Lavalle, S. M., Jan 1 2019, In : Autonomous Robots.

Research output: Contribution to journalArticle

Robots
Feedback
Controllers
Sensors
State estimation

A Multirate Adaptive Control for MIMO Systems with Application to Cyber-Physical Security

Jafarnejadsani, H., Lee, H., Hovakimyan, N. & Voulgaris, P. G., Jan 18 2019, 2018 IEEE Conference on Decision and Control, CDC 2018. Institute of Electrical and Electronics Engineers Inc., p. 6620-6625 6 p. 8619570. (Proceedings of the IEEE Conference on Decision and Control; vol. 2018-December).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Adaptive Control
Controller
Controllers
Output
Attack

A Multiscale Time Integration Method for Coupled Nonlinear Electrical-Thermal Simulation

Yan, S. & Jin, J., Jan 10 2019, 2018 IEEE Antennas and Propagation Society International Symposium and USNC/URSI National Radio Science Meeting, APSURSI 2018 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 141-142 2 p. 8609202. (2018 IEEE Antennas and Propagation Society International Symposium and USNC/URSI National Radio Science Meeting, APSURSI 2018 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

thermal simulation
Microwaves
cycles
electromagnetism
microwaves
Dynamic Adaptation
Discontinuous Galerkin
Time Integration
simulators
Time Domain

An algorithm for enhancing spatiotemporal resolution of probabilistic risk assessment to address emergent safety concerns in nuclear power plants

Bui, H., Sakurahara, T., Pence, J., Reihani, S., Kee, E. & Mohaghegh, Z., May 1 2019, In : Reliability Engineering and System Safety. 185, p. 405-428 24 p.

Research output: Contribution to journalArticle

Risk assessment
Nuclear power plants
Nuclear industry
Fires

Analysis of heater-wall temperature distributions during the saturated pool boiling of water

Voglar, J., Zupančič, M., Peperko, A., Birbarah, P., Miljkovic, N. & Golobič, I., Apr 1 2019, In : Experimental Thermal and Fluid Science. p. 205-214 10 p.

Research output: Contribution to journalArticle

Boiling liquids
Temperature distribution
Water
Stainless Steel
Stainless steel

Analysis of Paper-Based Colorimetric Assays with a Smartphone Spectrometer

Woodburn, E. V., Long, K. D. & Cunningham, B. T., Jan 15 2019, In : IEEE Sensors Journal. 19, 2, p. 508-514 7 p., 8494768.

Research output: Contribution to journalArticle

Smartphones
Spectrometers
Assays
strip
Cameras
Photoacoustic effect
Image Reconstruction
Tomography
Image reconstruction
Mathematical operators

Analytical Solution for Anomalous Diffusion of Bedload Tracers Gradually Undergoing Burial

Wu, Z., Foufoula-Georgiou, E., Parker, G., Singh, A., Fu, X. & Wang, G., Jan 1 2019, (Accepted/In press) In : Journal of Geophysical Research: Earth Surface.

Research output: Contribution to journalArticle

bedload
tracers
tracer techniques
tracer
Advection

Analyzing El Niño–Southern Oscillation Predictability Using Long-Short-Term-Memory Models

Huang, A., Vega-Westhoff, B. & Sriver, R., Feb 1 2019, In : Earth and Space Science. 6, 2, p. 212-221 10 p.

Research output: Contribution to journalArticle

Open Access
oscillation
sea surface temperature
prediction
tornado
zonal wind

Analyzing the economic value of thermal power plant cooling water consumption

Lubega, W. N. & Stillwell, A. S., Jan 1 2019, In : Water Resources and Economics.

Research output: Contribution to journalArticle

power plant
cooling water
economic value
water
economics

An Application of the Reasoned Action Approach to Bystander Intervention for Sexual Assault

Lukacena, K. M., Reynolds-Tylus, T. & Quick, B. L., Jan 2 2019, In : Health communication. 34, 1, p. 46-53 8 p.

Research output: Contribution to journalArticle

assault
Students
autonomy
Lenses
online survey

An Approach to Robust Synchronization of Electric Power Generators

Ajala, O., Dominguez-Garcia, A. & Liberzon, D. M., Jan 18 2019, 2018 IEEE Conference on Decision and Control, CDC 2018. Institute of Electrical and Electronics Engineers Inc., p. 1586-1591 6 p. 8618905. (Proceedings of the IEEE Conference on Decision and Control; vol. 2018-December).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Synchronization
Generator
Disturbance
Angular velocity
Angle

An Approximate Shading Model with Detail Decomposition for Object Relighting

Liao, Z., Karsch, K., Zhang, H. & Forsyth, D. A., Jan 15 2019, In : International Journal of Computer Vision. 127, 1, p. 22-37 16 p.

Research output: Contribution to journalArticle

Decomposition
Materials properties
Lighting
Chemical analysis
health care
legitimacy
damages
infrastructure
damage

Ancient DNA analysis of a nineteenth century tobacco pipe from a Maryland slave quarter

Schablitsky, J. M., Witt, K. E., Madrigal, J. R., Ellegaard, M. R., Malhi, R. S. & Schroeder, H., May 1 2019, In : Journal of Archaeological Science. 105, p. 11-18 8 p.

Research output: Contribution to journalArticle

genetic test
slave
nicotine
artifact
nineteenth century

An Efficient Transient em Solver with Dynamic P- Adaptation and Multirate Time Integration

Yan, S. & Jin, J., Jan 10 2019, 2018 IEEE Antennas and Propagation Society International Symposium and USNC/URSI National Radio Science Meeting, APSURSI 2018 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 1321-1322 2 p. 8608287. (2018 IEEE Antennas and Propagation Society International Symposium and USNC/URSI National Radio Science Meeting, APSURSI 2018 - Proceedings).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Polynomials
polynomials
Scattering
simulation
electromagnetic scattering

An Embodied Cyberlearning Platform for Gestural Interaction with Cross-Cutting Science Concepts

Lindgren, R. W., Morphew, J., Kang, J. & Junokas, M., Feb 1 2019, In : Mind, Brain, and Education. 13, 1, p. 53-61 9 p.

Research output: Contribution to journalArticle

Learning
interaction
science
Cognition
learning

An ergodic BSDE approach to forward entropic risk measures: representation and large-maturity behavior

Chong, W. F., Hu, Y., Liang, G. & Zariphopoulou, T., Jan 15 2019, In : Finance and Stochastics. 23, 1, p. 239-273 35 p.

Research output: Contribution to journalArticle

Backward Stochastic Differential Equation
Risk Measures
Convex Duality
Factor Models
Parity

An evaluation of a motor vehicle facility campaign with an established statewide donor registry: A test of sustainable, evidence-based intervention strategies

Quick, B. L., King, A. J., Reynolds-Tylus, T. & Moore, M., Mar 1 2019, In : Clinical Transplantation. 33, 3, e13475.

Research output: Contribution to journalArticle

Tissue and Organ Procurement
Motor Vehicles
Registries
Tissue Donors
Posters

An evaluation of primers for detecting denitrifiers via their functional genes

Ma, Y., Zilles, J. & Kent, A. D., Jan 1 2019, In : Environmental Microbiology.

Research output: Contribution to journalArticle

Denitrification
denitrification
Ecology
functional group
gene

A new framework for sampling-based uncertainty quantification of the six-group reactor kinetic parameters

Radaideh, M. I., Wieselquist, W. A. & Kozlowski, T., May 1 2019, In : Annals of Nuclear Energy. 127, p. 1-11 11 p.

Research output: Contribution to journalArticle

Kinetic parameters
Neutrons
Sampling
Isotopes
Uncertainty

A new implementation for online calculation of manipulator Jacobian

Chembrammel, P. & Kesavadas, T., Feb 1 2019, In : PloS one. 14, 2, e0212018.

Research output: Contribution to journalArticle

Open Access
robots
Manipulators
Robots
Differentiation (calculus)
Derivatives
Multiresolution analysis
ground motion
wavelet
earthquakes
Earthquakes

An extended regulatory landscape drives Tbx18 activity in a variety of prostate-associated cell lineages

Negi, S., Bolt, C. C., Zhang, H. & Stubbs, L. J., Feb 15 2019, In : Developmental Biology. 446, 2, p. 180-192 13 p.

Research output: Contribution to journalArticle

Cell Lineage
Chromatin
Prostate
Essential Genes
Ureter

An incremental graph-partitioning algorithm for entity resolution

Tauer, G., Date, K., Nagi, R. & Sudit, M., Mar 1 2019, In : Information Fusion. 46, p. 171-183 13 p.

Research output: Contribution to journalArticle

Heuristic algorithms

An initial review of residual symptoms after empirically supported trauma-focused cognitive behavioral psychological treatment

Larsen, S. E., Bellmore, A., Gobin, R. L., Holens, P., Lawrence, K. A. & Pacella-LaBarbara, M. L., Apr 1 2019, In : Journal of Anxiety Disorders. 63, p. 26-35 10 p.

Research output: Contribution to journalReview article

Post-Traumatic Stress Disorders
Psychology
Wounds and Injuries
Anxiety
Quality of Life

An innovative, cross-disciplinary approach to promoting child health: The reggio emilia approach and the ecological approach to family style dining program

Dev, D. A., Burton, A., McBride, B. A., Edwards, C. P. & Garcia, A. S., Jan 2 2019, In : Childhood Education. 95, 1, p. 57-63 7 p.

Research output: Contribution to journalArticle

Quality of Health Care
Meals
Education
Health
health

An innovative nutritional slow-release packing material with functional microorganisms for biofiltration: Characterization and performance evaluation

Cheng, Z., Feng, K., Xu, D., Kennes, C., Chen, J., Chen, D., Zhang, S., Ye, J. & Dionysiou, D. D., Mar 15 2019, In : Journal of Hazardous Materials. 366, p. 16-26 11 p.

Research output: Contribution to journalArticle

Biofiltration
biofiltration
Microorganisms
microorganism
X-Ray Emission Spectrometry
Holography
holography
Anomalous
Fractional
Extension Theorem

Anomalous scaling of flexural phonon damping in nanoresonators with confined fluid

De, S. & Aluru, N. R., Dec 1 2019, In : Microsystems and Nanoengineering. 5, 1, 2.

Research output: Contribution to journalArticle

Damping
damping
scaling
Fluids
fluids

Anomalous tilting in InGaAs graded buffers from dislocation sources at wafer edges

Mukherjee, K., Vaisman, M., Callahan, P. G. & Lee, M. L., Apr 15 2019, In : Journal of Crystal Growth. 512, p. 169-175 7 p.

Research output: Contribution to journalArticle

Strain relaxation
Buffers
buffers
wafers
Dislocations (crystals)

A novel approach for characterizing the variability in mass-dimension relationships: Results from MC3E

Finlon, J. A., McFarquhar, G. M., Nesbitt, S., Rauber, R. M., Morrison, H., Wu, W. & Zhang, P., Mar 21 2019, In : Atmospheric Chemistry and Physics. 19, 6, p. 3621-3643 23 p.

Research output: Contribution to journalArticle

Open Access
water content
probe
flight
radar
remote sensing

A novel atom search optimization for dispersion coefficient estimation in groundwater

Zhao, W., Wang, L. & Zhang, Z., 2019, In : Future Generation Computer Systems. 91, p. 601-610 10 p.

Research output: Contribution to journalArticle

Groundwater
Atoms
Global optimization
Lennard-Jones potential
Bond length

A novel technique for in situ uniaxial tests of self-assembled soft biomaterials

Elhebeary, M., Emon, M. A. B., Aydin, O. & Saif, M. T. A., Jan 1 2019, In : Lab on a Chip. 19, 7, p. 1153-1161 9 p.

Research output: Contribution to journalArticle

Biocompatible Materials
Biomaterials
Tissue
Collagen
Electric Stimulation

Antarctic blackfin icefish genome reveals adaptations to extreme environments

Kim, B. M., Amores, A., Kang, S., Ahn, D. H., Kim, J. H., Kim, I. C., Lee, J. H., Lee, S. G., Lee, H., Lee, J., Kim, H. W., Desvignes, T., Batzel, P., Sydes, J., Titus, T., Wilson, C. A., Catchen, J. M., Warren, W. C., Schartl, M., Detrich, H. W. & 2 othersPostlethwait, J. H. & Park, H., Mar 1 2019, In : Nature Ecology and Evolution. 3, 3, p. 469-478 10 p.

Research output: Contribution to journalArticle

genome
gene
genes
ice damage
biological rhythm
Anthocyanins
adipocytes
Adipocytes
Zea mays
glucosides

Anthropogenic stresses on the world’s big rivers

Best, J. L., Jan 1 2019, In : Nature Geoscience. 12, 1, p. 7-21 15 p.

Research output: Contribution to journalReview article

river
hydrological change
civilization
finance
floodplain

Anti-plane shear lamb’s problem on random mass density fields with fractal and hurst effects

Zhang, X., Nishawala, V. & Starzewski, M. O., Mar 1 2019, In : Evolution Equations and Control Theory. 8, 1, p. 231-246 16 p.

Research output: Contribution to journalArticle

Anti-plane Shear
Dynamic Response
Fractals
Dynamic response
Fractal

Antiresonances and ultrafast resonances in a twin photonic oscillator

Kominis, Y., Choquette, K. D., Bountis, A. & Kovanis, V., Feb 1 2019, In : IEEE Photonics Journal. 11, 1, 8630807.

Research output: Contribution to journalArticle

Photonics
oscillators
Modulation
photonics
modulation
Special Education
Program Evaluation
Disabled Children
Parents
Mothers