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• Article

  Transcriptome dynamics of Camellia sinensis in response to continuous salinity and drought stress

  Zhang, Q., Cai, M., Yu, X., Wang, L., Guo, C., Ming, R. & Zhang, J., Aug 1 2017, In: Tree Genetics and Genomes. 13, 4, 78.

  Research output: Contribution to journal › Article › peer-review

• Transcriptome-Enabled Network Inference Revealed the GmCOL1 Feed-Forward Loop and Its Roles in Photoperiodic Flowering of Soybean

  Wu, F., Kang, X., Wang, M., Haider, W., Price, W. B., Hajek, B. & Hanzawa, Y., Nov 8 2019, In: Frontiers in Plant Science. 10, 1221.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptome identification of putative genes involved in protein catabolism and innate immune response in human body louse (Pediculicidae: Pediculus humanus)

  Pedra, J. H. F., Brandt, A., Li, H. M., Westerman, R., Romero-Severson, J., Pollack, R. J., Murdock, L. L., Pittendrigh, B. R. & Collins, F. H., Nov 2003, In: Insect Biochemistry and Molecular Biology. 33, 11, p. 1135-1143 9 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptome of the egg parasitoid Fopius arisanus: An important biocontrol tool for Tephritid fruit fly suppression

  Calla, B., Sim, S. B., Hall, B., DeRego, T., Liang, G. H. & Geib, S. M., 2015, In: GigaScience. 4, 1, 36.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptome profile and cytogenetic analysis of immortalized neuronally restricted progenitor cells derived from the porcine olfactory bulb

  Uebing-Czipura, A. U., Dawson, H. D., Rutherford, M. S. & Scherba, G., Oct 2009, In: Animal Biotechnology. 20, 4, p. 186-215 30 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptome profiles of whole blood in Italian Holstein and Italian Simmental lactating cows diverging for genetic merit for milk protein

  Sandri, M., Stefanon, B. & Loor, J. J., Sep 1 2015, In: Journal of Dairy Science. 98, 9, p. 6119-6127 9 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptome profiling and genome-wide association studies reveal Gsts and other defense genes involved in multiple signaling pathways induced by herbicide safener in grain sorghum

  Baek, Y. S., Goodrich, L. V., Brown, P. J., James, B. T., Moose, S. P., Lambert, K. N. & Riechers, D. E., Mar 7 2019, In: Frontiers in Plant Science. 10, 192.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptome profiling of the small intestinal epithelium in germfree versus conventional piglets

  Chowdhury, S. R., King, D. E., Willing, B. P., Band, M. R., Beever, J. E., Lane, A. B., Loor, J. J., Marini, J. C., Rund, L. A., Schook, L. B., Van Kessel, A. G. & Rex, H. R., Jul 5 2007, In: BMC genomics. 8, 215.

  Research output: Contribution to journal › Article › peer-review

• Transcriptome profiling revealed stress-induced and disease resistance genes up-regulated in PRSV resistant transgenic papaya

  Fang, J., Lin, A., Qiu, W., Cai, H., Umar, M., Chen, R. & Ming, R., Jun 16 2016, In: Frontiers in Plant Science. 7, JUNE2016, 855.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptome Profiling Reveals Molecular Players in Early Soybean–Sclerotinia sclerotiorum Interaction

  Wei, W., Wu, X., Blahut-Beatty, L., Simmonds, D. H. & Clough, S. J., Aug 2022, In: Phytopathology. 112, 8, p. 1739-1752 14 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptome response to glyphosate in sensitive and resistant soybean

  Zhu, J., Patzoldt, W. L., Shealy, R. T., Vodkin, L. O., Clough, S. J. & Tranel, P. J., Aug 13 2008, In: Journal of Agricultural and Food Chemistry. 56, 15, p. 6355-6363 9 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptome sequencing, and rapid development and application of snp markers for the legume pod borer maruca vitrata (lepidoptera: Crambidae)

  Margam, V. M., Coates, B. S., Bayles, D. O., Hellmich, R. L., Agunbiade, T., Seufferheld, M. J., Sun, W., Kroemer, J. A., Ba, M. N., Binso-Dabire, C. L., Baoua, I., Ishiyaku, M. F., Covas, F. G., Srinivasan, R., Armstrong, J., Murdock, L. L. & Pittendrigh, B. R., 2011, In: PloS one. 6, 7, e21388.

  Research output: Contribution to journal › Article › peer-review

• Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: Utility and potential for the discovery of novel evolutionary patterns

  Malik, A., Korol, A., Hübner, S., Hernandez, A. G., Thimmapuram, J., Ali, S., Glaser, F., Paz, A., Avivi, A. & Band, M., 2011, In: PloS one. 6, 8, e21227.

  Research output: Contribution to journal › Article › peer-review

• Transcriptome-Wide Analysis Reveals the Role of PPAR γ Controlling the Lipid Metabolism in Goat Mammary Epithelial Cells

  Shi, H., Zhao, W., Zhang, C., Shahzad, K., Luo, J. & Loor, J. J., 2016, In: PPAR Research. 2016, 9195680.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptomic Analyses of Black Women in Neighborhoods with High Levels of Violence

  Lee, M. J., Rittschof, C. C., Greenlee, A. J., Turi, K. N., Rodriguez-Zas, S. L., Robinson, G. E., Cole, S. W. & Mendenhall, R., May 2021, In: Psychoneuroendocrinology. 127, 105174.

  Research output: Contribution to journal › Article › peer-review

• Transcriptomic analyses of xylan degradation by Prevotella bryantii and insights into energy acquisition by xylanolytic bacteroidetes

  Dodd, D., Moon, Y. H., Swaminathan, K., Mackie, R. I. & Cann, I. K. O., Sep 24 2010, In: Journal of Biological Chemistry. 285, 39, p. 30261-30273 13 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptomic analysis across liver diseases reveals disease-modulating activation of constitutive androstane receptor in cholestasis

  Mathur, B., Arif, W., Patton, M. E., Faiyaz, R., Liu, J., Yeh, J., Harpavat, S., Schoonjans, K., Kalsotra, A., Wheatley, A. M. & Anakk, S., Oct 2020, In: JHEP Reports. 2, 5, 100140.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptomic analysis identifies gene networks regulated by estrogen receptor α (ERα) and ERβ that control distinct effects of different botanical estrogens

  Gong, P., Madak-Erdogan, Z., Li, J., Cheng, J., Greenlief, C. M., Helferich, W., Katzenellenbogen, J. A. & Katzenellenbogen, B. S., 2014, In: Nuclear receptor signaling. 12, p. e001

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptomic analysis of circulating neutrophils in metabolically stressed peripartal grazing dairy cows

  Crookenden, M. A., Moyes, K. M., Kuhn-Sherlock, B., Lehnert, K., Walker, C. G., Loor, J. J., Mitchell, M. D., Murray, A., Dukkipati, V. S. R., Vailati-Riboni, M., Heiser, A. & Roche, J. R., Aug 2019, In: Journal of Dairy Science. 102, 8, p. 7408-7420 13 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptomic analysis of instinctive and learned reward-related behaviors in honey bees

  Naeger, N. L. & Robinson, G. E., Nov 15 2016, In: Journal of Experimental Biology. 219, 22, p. 3554-3561 8 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptomic analysis of transgressive segregants revealed the central role of photosynthetic capacity and efficiency in biomass accumulation in sugarcane

  Singh, R., Jones, T., Wai, C. M., Jifon, J., Nagai, C., Ming, R. & Yu, Q., Dec 1 2018, In: Scientific reports. 8, 1, 4415.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptomic and genomic evolution under constant cold in Antarctic notothenioid fish

  Chen, Z., Cheng, C. H. C., Zhang, J., Cao, L., Chen, L., Zhou, L., Jin, Y., Ye, H., Deng, C., Dai, Z., Xu, Q., Hu, P., Sun, S., Shen, Y. & Chen, L., Sep 2 2008, In: Proceedings of the National Academy of Sciences of the United States of America. 105, 35, p. 12944-12949 6 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptomic and physiological analysis of endocrine disrupting chemicals Impacts on 3D Zebrafish liver cell culture system

  Park, C. G., Ryu, C. S., Sung, B., Manz, A., Kong, H. & Kim, Y. J., Apr 2022, In: Aquatic Toxicology. 245, 106105.

  Research output: Contribution to journal › Article › peer-review

• Transcriptomic Changes Induced by Deletion of Transcriptional Regulator GCR2 on Pentose Sugar Metabolism in Saccharomyces cerevisiae

  Shin, M., Park, H., Kim, S., Oh, E. J., Jeong, D., Florencia, C., Kim, K. H., Jin, Y. S. & Kim, S. R., Mar 25 2021, In: Frontiers in Bioengineering and Biotechnology. 9, 654177.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptomic characterization of cancer-testis antigens identifies MAGEA3 as a driver of tumor progression in hepatocellular carcinoma

  Craig, A. J., Garcia-Lezana, T., de Galarreta, M. R., Villacorta-Martin, C., Kozlova, E. G., Martins-Filho, S. N., Felden, J. V., Ahsen, M. E., Bresnahan, E., Hernandez-Meza, G., Labgaa, I., D’Avola, D., Schwartz, M., Llovet, J. M., Sia, D., Thung, S., Losic, B., Lujambio, A. & Villanueva, A., Jun 24 2021, In: PLoS genetics. 17, 6, e1009589.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptomic comparison of invasive bigheaded carps (Hypophthalmichthys nobilis and Hypophthalmichthys molitrix) and their hybrids

  Wang, J., Lamer, J. T., Gaughan, S., Wachholtz, M., Wang, C. & Lu, G., Dec 1 2016, In: Ecology and Evolution. 6, 23, p. 8452-8459 8 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptomic imprints of adaptation to fresh water: parallel evolution of osmoregulatory gene expression in the Alewife

  Velotta, J. P., Wegrzyn, J. L., Ginzburg, S., Kang, L., Czesny, S., O'Neill, R. J., McCormick, S. D., Michalak, P. & Schultz, E. T., Feb 1 2017, In: Molecular ecology. 26, 3, p. 831-848 18 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptomic insights into the genetic basis of mammalian limb diversity

  Maier, J. A., Rivas-Astroza, M., Deng, J., Dowling, A., Oboikovitz, P., Cao, X., Behringer, R. R., Cretekos, C. J., Rasweiler, J. J., Zhong, S. & Sears, K. E., Mar 23 2017, In: BMC Evolutionary Biology. 17, 1, 86.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptomic plasticity of the hypothalamic osmoregulatory control centre of the Arabian dromedary camel

  Lin, P., Gillard, B. T., Pauža, A. G., Iraizoz, F. A., Ali, M. A., Mecawi, A. S., Alim, F. Z. D., Romanova, E. V., Burger, P. A., Greenwood, M. P., Adem, A. & Murphy, D., Dec 2022, In: Communications biology. 5, 1, 1008.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptomic profiles of drosophila melanogaster third instar larval midgut and responses to oxidative stress

  Li, H. M., Buczkowski, G., Mittapalli, O., Xie, J., Wu, J., Westerman, R., Schemerhorn, B. J., Murdock, L. L. & Pittendrigh, B. R., Aug 2008, In: Insect Molecular Biology. 17, 4, p. 325-339 15 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptomic profiles of human foreskin fibroblast cells in response to orf virus

  Chen, D., Long, M., Xiao, B., Xiong, Y., Chen, H., Chen, Y., Kuang, Z., Li, M., Wu, Y., Rock, D. L., Gong, D., Wang, Y., He, H., Liu, F., Luo, S. & Hao, W., 2017, In: Oncotarget. 8, 35, p. 58668-58685 18 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptomic profiling of central nervous system regions in three species of honey bee during dance communication behavior

  Sen Sarma, M., Rodriguez-Zas, S. L., Hong, F., Zhong, S. & Robinson, G. E., Jul 29 2009, In: PloS one. 4, 7, e6408.

  Research output: Contribution to journal › Article › peer-review

• Transcriptomic profiling of fetal membranes of mice deficient in biglycan and decorin as a model of preterm birth

  Pantham, P., Armstrong, D. L., Bodnariuc, J., Haupt, O., Johnson, A. W., Underhill, L., Iozzo, R. V., Lechner, B. E. & Wildman, D., Mar 11 2021, In: Biology of reproduction. 104, 3, p. 611-623 13 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptomic response of cowpea bruchids to N-acetylglucosamine-specific lectins

  Wang, L. H., Chi, Y. H., Guo, F. G., Li-Byarlay, H., Balfe, S., Fang, J. C., Pittendrigh, B. R. & Zhu-Salzman, K., Feb 1 2015, In: Insect Science. 22, 1, p. 83-94 12 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptomic responses to diet quality and viral infection in Apis mellifera

  Rutter, L., Carrillo-Tripp, J., Bonning, B. C., Cook, D., Toth, A. L. & Dolezal, A. G., May 22 2019, In: BMC genomics. 20, 1, 412.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptomics and iTRAQ-Proteomics Analyses of Bovine Mammary Tissue with Streptococcus agalactiae-Induced Mastitis

  Zhang, H., Jiang, H., Fan, Y., Chen, Z., Li, M., Mao, Y., Karrow, N. A., Loor, J. J., Moore, S. & Yang, Z., Oct 24 2018, In: Journal of Agricultural and Food Chemistry. 66, 42, p. 11188-11196 9 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptomics comparison between porcine adipose and bone marrow mesenchymal stem cells during in vitro osteogenic and adipogenic differentiation

  Monaco, E., Bionaz, M., Rodriguez-Zas, S., Hurley, W. L. & Wheeler, M. B., Mar 7 2012, In: PloS one. 7, 3, e32481.

  Research output: Contribution to journal › Article › peer-review

• Transcriptomics of circulating neutrophils in dairy cows with subclinical hypocalcemia

  Zhang, B., Ma, X., Huang, B., Jiang, Q., Loor, J. J., Lv, X., Zhang, W., Li, M., Wen, J., Yin, Y., Wang, J., Yang, W. & Xu, C., Sep 13 2022, In: Frontiers in Veterinary Science. 9, 959831.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transcriptomics of muscle and fat development in growing cattle

  Loor, J. J., 2010, In: EAAP Scientific Series. 127, 1, p. 59-68 10 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptomics of plant responses to apical damage reveals no negative correlation between tolerance and defense

  Scholes, D. R. & Paige, K. N., Aug 4 2015, In: Plant Ecology. 216, 8, p. 1177-1190 14 p.

  Research output: Contribution to journal › Article › peer-review

• Transcriptomic variation and plasticity in rufous-collared sparrows (Zonotrichia capensis) along an altitudinal gradient

  Cheviron, Z. A., Whitehead, A. & Brumfield, R. T., Oct 2008, In: Molecular ecology. 17, 20, p. 4556-4569 14 p.

  Research output: Contribution to journal › Article › peer-review

• Transcript profiling reveals expression differences in wild-type and glabrous soybean lines

  Hunt, M., Kaur, N., Stromvik, M. & Vodkin, L., Oct 26 2011, In: BMC Plant Biology. 11, 145.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transdermal clonidine for ameliorating tamoxifen-induced hot flashes

  Goldberg, R. M., Loprinzi, C. L., O'Fallon, J. R., Veeder, M. H., Miser, A. W., Mailliard, J. A., Michalak, J. C., Dose, A. M., Rowland, K. M. & Burnham, N. L., Jan 1994, In: Journal of Clinical Oncology. 12, 1, p. 155-158 4 p.

  Research output: Contribution to journal › Article › peer-review

• Transdiagnostic dimensions of anxiety: Neural mechanisms, executive functions, and new directions

  Sharp, P. B., Miller, G. A. & Heller, W., Nov 2015, In: International Journal of Psychophysiology. 98, 2, p. 365-377 13 p.

  Research output: Contribution to journal › Article › peer-review

• Transdiagnostic dimensions of anxiety and depression moderate motivation-related brain networks during goal maintenance

  Spielberg, J. M., Miller, G. A., Warren, S. L., Sutton, B. P., Banich, M. & Heller, W., Oct 1 2014, In: Depression and Anxiety. 31, 10, p. 805-813 9 p.

  Research output: Contribution to journal › Article › peer-review

• Transdiagnostic Mechanisms of Psychopathology in Youth: Executive Functions, Dependent Stress, and Rumination

  Snyder, H. R., Friedman, N. P. & Hankin, B. L., Oct 15 2019, In: Cognitive Therapy and Research. 43, 5, p. 834-851 18 p.

  Research output: Contribution to journal › Article › peer-review

• Transdisciplinary obesity prevention research sciences (TOPRS) curriculum increases knowledge about complex causes and consequences of obesity for undergraduate students

  Fiese, B. H., Hammons, A., Koester, B., Garcia, G. L., Parker, L. & Teegarden, D., 2019, In: Frontiers in Public Health. 7, AUG, 232.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transdisciplinary team science for global health: Case study of the JUS media? Programme

  Ferguson, G. M., Fiese, B. H., Nelson, M. R. & Meeks Gardner, J. M., Sep 2019, In: American Psychologist. 74, 6, p. 725-739 15 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transducer field imaging using acoustography

  Sandhu, J. S., Schoonover, R. W., Weber, J. I., Tawiah, J., Kunin, V. & Anastasio, M. A., Jul 16 2012, In: Advances in Acoustics and Vibration. 275858.

  Research output: Contribution to journal › Article › peer-review

  Open Access

• Transducin activation by nanoscale lipid bilayers containing one and two rhodopsins

  Bayburt, T. H., Leitz, A. J., Xie, G., Oprian, D. D. & Sligar, S. G., May 18 2007, In: Journal of Biological Chemistry. 282, 20, p. 14875-14881 7 p.

  Research output: Contribution to journal › Article › peer-review