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• Article

  A DREAM challenge to build prediction models for short-term discontinuation of docetaxel in metastatic castration- resistant prostate cancer

  Prostate Cancer DREAM Challenge Community, 2017, In: JCO Clinical Cancer Informatics. 2017, 1, p. 1-15 15 p.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Docetaxel
  • Castration
  • Prostatic Neoplasms
  • Clinical Trials
  • Phase III Clinical Trials

• A framework of mining trajectories from untrustworthy data in cyber-physical system

  Tang, L. A., Yu, X., Gu, Q., Han, J., Jiang, G., Leung, A. & La Porta, T., Feb 1 2015, In: ACM Transactions on Knowledge Discovery from Data. 9, 3, p. 16 1 p.

  Research output: Contribution to journal › Article › peer-review

  • Cyber Physical System
  • Miners
  • Trajectories
  • Sand
  • Sensors

• A framework of traveling companion discovery on trajectory data streams

  Tang, L. A., Zheng, Y., Yuan, J., Han, J., Leung, A., Peng, W. C. & Porta, T. L., Dec 1 2013, In: ACM Transactions on Intelligent Systems and Technology. 5, 1, 2542185.

  Research output: Contribution to journal › Article › peer-review

  • Data Streams
  • Trajectory
  • Trajectories
  • Object
  • Framework

• A graph-based consensus maximization approach for combining multiple supervised and unsupervised models

  Gao, J., Liang, F., Fan, W., Sun, Y. & Han, J., Jan 1 2013, In: IEEE Transactions on Knowledge and Data Engineering. 25, 1, p. 15-28 14 p., 6035707.

  Research output: Contribution to journal › Article › peer-review

  • Labeling
  • Labels
  • Set theory
  • Costs

• A probabilistic approach to detect mixed periodic patterns from moving object data

  Li, J., Wang, J., Zhang, J., Qin, Q., Jindal, T. & Han, J., Oct 1 2016, In: GeoInformatica. 20, 4, p. 715-739 25 p.

  Research output: Contribution to journal › Article › peer-review

  • periodicity
  • candidacy
  • filter
  • world
  • detection method

• A unifying framework of mining trajectory patterns of various temporal tightness

  Lee, J. G., Han, J. & Li, X., Jun 1 2015, In: IEEE Transactions on Knowledge and Data Engineering. 27, 6, p. 1478-1490 13 p., 6977963.

  Research output: Contribution to journal › Article › peer-review

  • Trajectories

• Automated Phrase Mining from Massive Text Corpora

  Shang, J., Liu, J., Jiang, M., Ren, X., Voss, C. R. & Han, J., Oct 1 2018, In: IEEE Transactions on Knowledge and Data Engineering. 30, 10, p. 1825-1837 13 p., 8306825.

  Research output: Contribution to journal › Article › peer-review

  • Text processing
  • Taxonomies
  • Labeling
  • Linguistics

• Classification and adaptive novel class detection of feature-evolving data streams

  Masud, M. M., Chen, Q., Khan, L., Aggarwal, C. C., Gao, J., Han, J., Srivastava, A. & Oza, N. C., Jun 3 2013, In: IEEE Transactions on Knowledge and Data Engineering. 25, 7, p. 1484-1497 14 p., 6205751.

  Research output: Contribution to journal › Article › peer-review

  • Data mining
  • Detectors
  • Classifiers

• Conflicts to Harmony: A Framework for Resolving Conflicts in Heterogeneous Data by Truth Discovery

  Li, Y., Li, Q., Gao, J., Su, L., Zhao, B., Fan, W. & Han, J., Aug 1 2016, In: IEEE Transactions on Knowledge and Data Engineering. 28, 8, p. 1986-1999 14 p., 7460925.

  Research output: Contribution to journal › Article › peer-review

  • Data structures
  • Experiments

• Constructing topical hierarchies in heterogeneous information networks

  Wang, C., Liu, J., Desai, N., Danilevsky, M. & Han, J., Sep 17 2015, In: Knowledge and Information Systems. 44, 3, p. 529-558 30 p.

  Research output: Contribution to journal › Article › peer-review

  • Heterogeneous networks
  • Clustering algorithms
  • Industry
  • Experiments

• Deep multiplex graph infomax: Attentive multiplex network embedding using global information

  Park, C., Han, J. & Yu, H., Jun 7 2020, In: Knowledge-Based Systems. 197, 105861.

  Research output: Contribution to journal › Article › peer-review

  • Discriminators
  • Graph
  • Labels
  • Node
  • Experiments

• Detection of complexes in biological networks through diversified dense subgraph mining

  Ma, X., Zhou, G., Shang, J., Wang, J., Peng, J. & Han, J., Sep 2017, In: Journal of Computational Biology. 24, 9, p. 923-941 19 p.

  Research output: Contribution to journal › Article › peer-review

  • Biological Networks
  • Mining
  • Protein
  • Protein Interaction Networks
  • Proteins

• DPPred: An Effective Prediction Framework with Concise Discriminative Patterns

  Shang, J., Jiang, M., Tong, W., Xiao, J., Peng, J. & Han, J., Jul 1 2018, In: IEEE Transactions on Knowledge and Data Engineering. 30, 7, p. 1226-1239 14 p.

  Research output: Contribution to journal › Article › peer-review

  • Experiments

• DWCox: A density-weighted Cox model for outlier-robust prediction of prostate cancer survival

  Xiao, J., Wang, S., Shang, J., Lin, H., Xin, D., Ren, X., Han, J. & Peng, J., 2016, In: F1000Research. 5, 2806.

  Research output: Contribution to journal › Article › peer-review

  • Proportional Hazards Models
  • Prostatic Neoplasms
  • Survival
  • Datasets
  • Likelihood Functions

• Embedding learning with events in heterogeneous information networks

  Gui, H., Liu, J., Tao, F., Jiang, M., Norick, B., Kaplan, L. & Han, J., Nov 2017, In: IEEE Transactions on Knowledge and Data Engineering. 29, 11, p. 2428-2441 14 p., 7997782.

  Research output: Contribution to journal › Article › peer-review

  • Semantics
  • Experiments

• Entity linking with a knowledge base: Issues, techniques, and solutions

  Shen, W., Wang, J. & Han, J., Feb 1 2015, In: IEEE Transactions on Knowledge and Data Engineering. 27, 2, p. 443-460 18 p., 6823700.

  Research output: Contribution to journal › Article › peer-review

  • Information retrieval

• EPeriodicity: Mining event periodicity from incomplete observations

  Li, Z., Wang, J. & Han, J., May 1 2015, In: IEEE Transactions on Knowledge and Data Engineering. 27, 5, p. 1219-1232 14 p., 6940249.

  Research output: Contribution to journal › Article › peer-review

  • Global positioning system
  • Data mining
  • Uncertainty
  • Sensors
  • Experiments

• GeoBurst+: Effective and real-time local event detection in geo-tagged tweet streams

  Zhang, C., Lei, D., Yuan, Q., Zhuang, H., Kaplan, L., Wang, S. & Han, J., Feb 2018, In: ACM Transactions on Intelligent Systems and Technology. 9, 3, 34.

  Research output: Contribution to journal › Article › peer-review

  • Event Detection
  • Crowdsourcing
  • Real-time
  • Disasters
  • Monitoring

• Heterogeneous Network Representation Learning: A Unified Framework with Survey and Benchmark

  Yang, C., Xiao, Y., Zhang, Y., Sun, Y. & Han, J., 2020, (Accepted/In press) In: IEEE Transactions on Knowledge and Data Engineering.

  Research output: Contribution to journal › Article › peer-review

  • Heterogeneous networks
  • Labels
  • Availability

• KnowEnG: A knowledge engine for genomics

  Sinha, S., Song, J., Weinshilboum, R., Jongeneel, V. & Han, J., 2015, In: Journal of the American Medical Informatics Association. 22, 6, p. 1115-1119 5 p.

  Research output: Contribution to journal › Article › peer-review

  • Genomics
  • Big Data
  • Datasets
  • Data Mining
  • Knowledge Bases

• Knowledge-guided analysis of "omics" data using the KnowEnG cloud platform

  Blatti, C., Emad, A., Berry, M. J., Gatzke, L., Epstein, M., Lanier, D., Rizal, P., Ge, J., Liao, X., Sobh, O., Lambert, M., Post, C. S., Xiao, J., Groves, P., Epstein, A. T., Chen, X., Srinivasan, S., Lehnert, E., Kalari, K. R., Wang, L. & 8 others, Weinshilboum, R. M., Song, J. S., Jongeneel, C. V., Han, J., Ravaioli, U., Sobh, N., Bushell, C. B. & Sinha, S., 2020, In: PLoS biology. 18, 1, e3000583.

  Research output: Contribution to journal › Article › peer-review

  Open Access

  • Genomics
  • engines
  • data analysis
  • Data Analysis
  • genomics

• Liberal entity extraction: Rapid construction of fine-grained entity typing systems

  Huang, L., May, J., Pan, X., Ji, H., Ren, X., Han, J., Zhao, L. & Hendler, J. A., Mar 2017, In: Big Data. 5, 1, p. 19-31 13 p.

  Research output: Contribution to journal › Article › peer-review

  • Semantics
  • Knowledge representation
  • Language
  • Clustering algorithms
  • Hierarchical Clustering

• Meta-path-based search and mining in heterogeneous information networks

  Sun, Y. & Han, J., Aug 2013, In: Tsinghua Science and Technology. 18, 4, p. 329-338 10 p., 06574671.

  Research output: Contribution to journal › Article › peer-review

  • Semantics
  • Feedback

• Mining strong relevance between heterogeneous entities from unstructured biomedical data

  Ji, M., He, Q., Han, J. & Spangler, S., Jul 8 2015, In: Data Mining and Knowledge Discovery. 29, 4, p. 976-998 23 p.

  Research output: Contribution to journal › Article › peer-review

  • Semantics
  • Search engines

• Mining trajectory data and geotagged data in social media for road map inference

  Li, J., Qin, Q., Han, J., Tang, L. A. & Lei, K. H., Feb 1 2015, In: Transactions in GIS. 19, 1, p. 1-18 18 p.

  Research output: Contribution to journal › Article › peer-review

  • social media
  • trajectory
  • labor
  • commercial vehicle
  • road

• MiTexCube: MicroTextCluster Cube for online analysis of text cells and its applications

  Zhang, D., Zhai, C. & Han, J., Jun 1 2013, In: Statistical Analysis and Data Mining. 6, 3, p. 243-259 17 p.

  Research output: Contribution to journal › Article › peer-review

  • Regular hexahedron
  • Text
  • Cell
  • Text processing
  • Text Analysis

• Multiscale online media simulation with SocialCube

  Abdelzaher, T., Han, J., Hao, Y., Jing, A., Liu, D., Liu, S., Nguyen, H. H., Nicol, D. M., Shao, H., Wang, T., Yao, S., Zhang, Y., Malik, O., Dipple, S., Flamino, J., Buchanan, F., Cohen, S., Korniss, G. & Szymanski, B. K., Jun 1 2020, In: Computational and Mathematical Organization Theory. 26, 2, p. 145-174 30 p.

  Research output: Contribution to journal › Article › peer-review

  • Simulator
  • Simulators
  • Simulation
  • Abstraction
  • Object

• On exploiting transient social contact patterns for data forwarding in delay-tolerant networks

  Gao, W., Cao, G., La Porta, T. & Han, J., Jan 1 2013, In: IEEE Transactions on Mobile Computing. 12, 1, p. 151-165 15 p., 6086545.

  Research output: Contribution to journal › Article › peer-review

  • Delay tolerant networks
  • Electric power distribution
  • Costs

• Parallel field ranking

  Ji, M., Lin, B., He, X., Cai, D. & Han, J., Sep 1 2013, In: ACM Transactions on Knowledge Discovery from Data. 7, 3, 15.

  Research output: Contribution to journal › Article › peer-review

  • Information retrieval systems
  • Recommender systems
  • Pattern recognition

• PathSelClus: Integrating meta-path selection with user-guided Object clustering in heterogeneous information networks

  Sun, Y., Norick, B., Han, J., Yan, X., Yu, P. S. & Yu, X., Sep 1 2013, In: ACM Transactions on Knowledge Discovery from Data. 7, 3, 11.

  Research output: Contribution to journal › Article › peer-review

  • Seed
  • Semantics
  • Experiments

• Phrase mining of textual data to analyze extracellular matrix protein patterns across cardiovascular disease

  Liem, D. A., Murali, S., Sigdel, D., Shi, Y., Wang, X., Shen, J., Choi, H., Caufield, J. H., Wang, W., Ping, P. & Han, J., Oct 2018, In: American Journal of Physiology - Heart and Circulatory Physiology. 315, 4, p. H910-H924

  Research output: Contribution to journal › Article › peer-review

  • Extracellular Matrix Proteins
  • Data Analysis
  • Cardiovascular Diseases
  • Proteins
  • Extracellular Matrix

• Recurring and novel class detection using class-based ensemble for evolving data stream

  Al-Khateeb, T., Masud, M. M., Al-Naami, K. M., Seker, S. E., Mustafa, A. M., Khan, L., Trabelsi, Z., Aggarwal, C. & Han, J., Oct 2016, In: IEEE Transactions on Knowledge and Data Engineering. 28, 10, p. 2752-2764 13 p., 7350165.

  Research output: Contribution to journal › Article › peer-review

• Reinforced similarity integration in image-rich information networks

  Jin, X., Luo, J., Yu, J., Wang, G., Joshi, D. & Han, J., 2013, In: IEEE Transactions on Knowledge and Data Engineering. 25, 2, p. 448-460 13 p., 6081863.

  Research output: Contribution to journal › Article › peer-review

  • Websites
  • Recommender systems
  • Information retrieval
  • Internet

• Revealing density-based clustering structure from the core-connected tree of a network

  Huang, J., Sun, H., Song, Q., Deng, H. & Han, J., Aug 1 2013, In: IEEE Transactions on Knowledge and Data Engineering. 25, 8, p. 1876-1889 14 p., 6200274.

  Research output: Contribution to journal › Article › peer-review

  • Specifications
  • Experiments

• SHINE+: A General Framework for Domain-Specific Entity Linking with Heterogeneous Information Networks

  Shen, W., Han, J., Wang, J., Yuan, X. & Yang, Z., Feb 1 2018, In: IEEE Transactions on Knowledge and Data Engineering. 30, 2, p. 353-366 14 p., 7990163.

  Research output: Contribution to journal › Article › peer-review

  • Statistical Models

• The environmental-data automated track annotation (Env-DATA) system: Linking animal tracks with environmental data

  Dodge, S., Bohrer, G., Weinzierl, R., Davidson, S. C., Kays, R., Douglas, D., Cruz, S., Han, J., Brandes, D. & Wikelski, M., Jul 3 2013, In: Movement Ecology. 1, 1, 3.

  Research output: Contribution to journal › Article › peer-review

  • environmental data
  • remote sensing
  • animal
  • Phoebastria
  • weather

• The parallel path framework for entity discovery on the Web

  Weninger, T., Johnston, T. J. & Han, J., Oct 21 2013, In: ACM Transactions on the Web. 7, 3, 16.

  Research output: Contribution to journal › Article › peer-review

  • Websites
  • Electronic mail
  • World Wide Web
  • Agglomeration

• Towards quality aware information integration in distributed sensing systems

  Jiang, W., Miao, C., Su, L., Li, Q., Hu, S., Wang, S., Gao, J., Liu, H., Abdelzaher, T. F., Han, J., Liu, X., Gao, Y. & Kaplan, L., Jan 2018, In: IEEE Transactions on Parallel and Distributed Systems. 29, 1, p. 198-211 14 p.

  Research output: Contribution to journal › Article › peer-review

  • Sensor nodes
  • Agglomeration
  • Labels
  • Decision making
  • Availability

• Trustworthiness analysis of sensor data in cyber-physical systems

  Tang, L. A., Yu, X., Kim, S., Gu, Q., Han, J., Leung, A. & La Porta, T., May 2013, In: Journal of Computer and System Sciences. 79, 3, p. 383-401 19 p.

  Research output: Contribution to journal › Article › peer-review

  • Trustworthiness
  • Sensor
  • Cyber Physical System
  • Sensor Networks
  • Sensors

• Unsupervised meta-path selection for text similarity measure based on heterogeneous information networks

  Wang, C., Song, Y., Li, H., Zhang, M. & Han, J., Nov 1 2018, In: Data Mining and Knowledge Discovery. 32, 6, p. 1735-1767 33 p.

  Research output: Contribution to journal › Article › peer-review

  • Semantics
  • Costs
  • Experiments

• World knowledge as indirect supervision for document clustering

  Wang, C., Song, Y., Roth, D., Zhang, M. & Han, J., Dec 2016, In: ACM Transactions on Knowledge Discovery from Data. 11, 2, 13.

  Research output: Contribution to journal › Article › peer-review

  • Semantics
  • Clustering algorithms
  • Experiments
  • Linguistics
  • Machine learning
• Chapter

  A multi-graph spectral framework for mining multi-source anomalies

  Gao, J., Du, N., Fan, W., Turaga, D., Parthasarathy, S. & Han, J., Jan 1 2013, Graph Embedding for Pattern Analysis. Springer New York, p. 205-227 23 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Anomaly detection
  • Intrusion detection
  • Explosions
  • Health
  • Monitoring

• A survey of datamining methods for sensor network bug diagnosis

  Abdelzaher, T. & Han, J., Jul 1 2013, Managing and Mining Sensor Data. Springer US, Vol. 9781461463092. p. 429-458 30 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Sensor networks
  • Data mining

• A survey of RFID data processing

  Aggarwal, C. C. & Han, J., Jul 1 2013, Managing and Mining Sensor Data. Springer US, Vol. 9781461463092. p. 349-382 34 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Radio frequency identification (RFID)
  • Information management
  • Logistics
  • Sensors
  • Costs

• Efficient direct mining of selective discriminative patterns for classification

  Cheng, H., Han, J., Yan, X. & Yu, P. S., Apr 19 2016, Contrast Data Mining: Concepts, Algorithms, and Applications. CRC Press, p. 39-58 20 p.

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

• Truth discovery and crowdsourcing aggregation: A unified perspective

  Gao, J., Li, Q., Zhao, B., Fan, W. & Han, J., Jan 1 2015, Proceedings of the VLDB Endowment. 12 ed. Association for Computing Machinery, p. 2048-2049 2 p. (Proceedings of the VLDB Endowment; vol. 8, no. 12).

  Research output: Chapter in Book/Report/Conference proceeding › Chapter

  • Crowdsourcing
  • Agglomeration
  • Big data
  • Websites
  • Data acquisition
• Conference article

  A feature-enhanced ranking-based classifier for multimodal data and heterogeneous information networks

  Chen, S. D., Chen, Y. Y., Han, J. & Moulin, P., Dec 1 2013, In: Proceedings - IEEE International Conference on Data Mining, ICDM. p. 997-1002 6 p., 6729588.

  Research output: Contribution to journal › Conference article › peer-review

  • Classifiers
  • Support vector machines

• Annotating gene sets by mining large literature collections with protein networks

  Wang, S., Ma, J., Yu, M. K., Zheng, F., Huang, E. W., Han, J., Peng, J. & Ideker, T., 2018, In: Pacific Symposium on Biocomputing. 0, 212669, p. 602-613 12 p.

  Research output: Contribution to journal › Conference article › peer-review

  • Proteins
  • Genes
  • Biological Ontologies
  • Natural Language Processing
  • Set theory

• Clustered support vector machines

  Gu, Q. & Han, J., Jan 1 2013, In: Journal of Machine Learning Research. 31, p. 307-315 9 p.

  Research output: Contribution to journal › Conference article › peer-review

  • Support Vector Machine
  • Support vector machines
  • kernel
  • Classifier
  • Regularization

• Collaborative multi-level embedding learning from reviews for rating prediction

  Wei, Z., Yuan, Q., Han, J. & Jianyong, W., Jan 1 2016, In: IJCAI International Joint Conference on Artificial Intelligence. 2016-January, p. 2986-2992 7 p.

  Research output: Contribution to journal › Conference article › peer-review

  • Factorization