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Article
13C-lutein is differentially distributed in tissues of an adult female rhesus macaque following a single oral administration: a pilot study
Jeon, S., Li, Q., Rubakhin, S. S., Sweedler, J. V., Smith, J. W., Neuringer, M., Kuchan, M. & Erdman, J. W., Jan 2019, In: Nutrition Research. 61, p. 102-108 7 p.Research output: Contribution to journal › Article › peer-review
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1-methylthio-d-xylulose 5-phosphate methylsulfurylase: A novel route to 1-deoxy-d-xylulose 5-phosphate in Rhodospirillum rubrum
Warlick, B. P., Evans, B. S., Erb, T. J., Ramagopal, U. A., Sriram, J., Imker, H. J., Sauder, J. M., Bonanno, J. B., Burley, S. K., Tabita, F. R., Almo, S. C., Sweedler, J. S. & Gerlt, J. A., Oct 23 2012, In: Biochemistry. 51, 42, p. 8324-8326 3 p.Research output: Contribution to journal › Article › peer-review
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A D-amino acid-containing neuropeptide discovery funnel
Livnat, I., Tai, H. C., Jansson, E. T., Bai, L., Romanova, E. V., Chen, T. T., Yu, K., Chen, S. A., Zhang, Y., Wang, Z. Y., Liu, D. D., Weiss, K. R., Jing, J. & Sweedler, J. V., Dec 6 2016, In: Analytical Chemistry. 88, 23, p. 11868-11876 9 p.Research output: Contribution to journal › Article › peer-review
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A high spatiotemporal study of somatic exocytosis with scanning electrochemical microscopy and nanoITIES electrodes
Welle, T. M., Alanis, K., Colombo, M. L., Sweedler, J. V. & Shen, M., 2018, In: Chemical Science. 9, 22, p. 4937-4941 5 p.Research output: Contribution to journal › Article › peer-review
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Analyses of pig genomes provide insight into porcine demography and evolution
Groenen, M. A. M., Archibald, A. L., Uenishi, H., Tuggle, C. K., Takeuchi, Y., Rothschild, M. F., Rogel-Gaillard, C., Park, C., Milan, D., Megens, H. J., Li, S., Larkin, D. M., Kim, H., Frantz, L. A. F., Caccamo, M., Ahn, H., Aken, B. L., Anselmo, A., Anthon, C., Auvil, L. & 116 others, , Nov 15 2012, In: Nature. 491, 7424, p. 393-398 6 p.Research output: Contribution to journal › Article › peer-review
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A neuron-in-capillary platform for facile collection and mass spectrometric characterization of a secreted neuropeptide
Lee, C. Y., Fan, Y., Rubakhin, S. S., Yoon, S. & Sweedler, J. V., Jun 1 2016, In: Scientific reports. 6, 26940.Research output: Contribution to journal › Article › peer-review
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A one-step matrix application method for MALDI mass spectrometry imaging of bacterial colony biofilms
Li, B., Comi, T. J., Si, T., Dunham, S. J. B. & Sweedler, J. V., Nov 1 2016, In: Journal of Mass Spectrometry. 51, 11, p. 1030-1035 6 p.Research output: Contribution to journal › Article › peer-review
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Aplysia allatotropin-related peptide and its newly identified D-amino acid-containing epimer both activate a receptor and a neuronal target
Checco, J. W., Zhang, G., Yuan, W. D., Le, Z. W., Jing, J. & Sweedler, J. V., Oct 26 2019, In: Journal of Biological Chemistry. 293, 43, p. 16862-16873 12 p.Research output: Contribution to journal › Article › peer-review
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Aplysia locomotion: Network and behavioral actions of GdFFD, a D-amino acid-containing neuropeptide
Yang, C. Y., Yu, K., Wang, Y., Chen, S. A., Liu, D. D., Wang, Z. Y., Su, Y. N., Yang, S. Z., Chen, T. T., Livnat, I., Vilim, F. S., Cropper, E. C., Weiss, K. R., Sweedler, J. V. & Jing, J., Jan 1 2016, In: PloS one. 11, 1, e0147335.Research output: Contribution to journal › Article › peer-review
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A protease for 'middle-down' proteomics
Wu, C., Tran, J. C., Zamdborg, L., Durbin, K. R., Li, M., Ahlf, D. R., Early, B. P., Thomas, P. M., Sweedler, J. V. & Kelleher, N. L., Aug 1 2012, In: Nature Methods. 9, 8, p. 822-824 3 p.Research output: Contribution to journal › Article › peer-review
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A rotifer-derived paralytic compound prevents transmission of schistosomiasis to a mammalian host
Gao, J., Yang, N., Lewis, F. A., Yau, P., Collins, J. J., Sweedler, J. V. & Newmark, P. A., Oct 17 2019, In: PLoS biology. 17, 10, e3000485.Research output: Contribution to journal › Article › peer-review
Open Access -
A RubisCO-like protein links SAM metabolism with isoprenoid biosynthesis
Erb, T. J., Evans, B. S., Cho, K., Warlick, B. P., Sriram, J., Wood, B. M. K., Imker, H. J., Sweedler, J. V., Tabita, F. R. & Gerlt, J. A., Nov 2012, In: Nature chemical biology. 8, 11, p. 926-932 7 p.Research output: Contribution to journal › Article › peer-review
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A Versatile Strategy for Characterization and Imaging of Drip Flow Microbial Biofilms
Li, B., Dunham, S. J. B., Ellis, J. F., Lange, J. D., Smith, J. R., Yang, N., King, T. L., Amaya, K. R., Arnett, C. M. & Sweedler, J. V., Jun 5 2018, In: Analytical Chemistry. 90, 11, p. 6725-6734 10 p.Research output: Contribution to journal › Article › peer-review
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Characterization of bacillus subtilis colony biofilms via mass spectrometry and fluorescence imaging
Si, T., Li, B., Zhang, K., Xu, Y., Zhao, H. & Sweedler, J. V., Jun 3 2016, In: Journal of Proteome Research. 15, 6, p. 1955-1962 8 p.Research output: Contribution to journal › Article › peer-review
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Circadian rhythm of redox state regulates excitability in suprachiasmatic nucleus neurons
Wang, T. A., Yu, Y. V., Govindaiah, G., Ye, X., Artinian, L., Coleman, T. P., Sweedler, J. V., Cox, C. L. & Gillette, M. U., Aug 17 2012, In: Science. 337, 6096, p. 839-842 4 p.Research output: Contribution to journal › Article › peer-review
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Comparative peptidomics analysis of neural adaptations in rats repeatedly exposed to amphetamine
Romanova, E. V., Lee, J. E., Kelleher, N. L., Sweedler, J. V. & Gulley, J. M., Nov 2012, In: Journal of Neurochemistry. 123, 2, p. 276-287 12 p.Research output: Contribution to journal › Article › peer-review
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Conformational investigation of the structure-activity relationship of GdFFD and its analogues on an achatin-like neuropeptide receptor of: Aplysia californica involved in the feeding circuit
Do, T. D., Checco, J. W., Tro, M., Shea, J. E., Bowers, M. T. & Sweedler, J. V., 2018, In: Physical Chemistry Chemical Physics. 20, 34, p. 22047-22057 11 p.Research output: Contribution to journal › Article › peer-review
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Disruption of microglia histone acetylation and protein pathways in mice exhibiting inflammation-associated depression-like symptoms
Rodriguez-Zas, S. L., Wu, C., Southey, B. R., O'Connor, J. C., Nixon, S. E., Garcia, R., Zavala, C., Lawson, M., McCusker, R. H., Romanova, E. V., Sweedler, J. V., Kelley, K. W. & Dantzer, R., Nov 2018, In: Psychoneuroendocrinology. 97, p. 47-58 12 p.Research output: Contribution to journal › Article › peer-review
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Editorial and Review: 29th ASMS Sanibel Conference on Mass Spectrometry—Peptidomics: Bridging the Gap between Proteomics and Metabolomics by MS
Li, L., Andrén, P. E. & Sweedler, J. V., May 1 2018, In: Journal of the American Society for Mass Spectrometry. 29, 5, p. 801-806 6 p.Research output: Contribution to journal › Article › peer-review
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Evaluation of database search programs for accurate detection of neuropeptides in tandem mass spectrometry experiments
Akhtar, M. N., Southey, B. R., Andrén, P. E., Sweedler, J. V. & Rodriguez-Zas, S. L., Dec 7 2012, In: Journal of Proteome Research. 11, 12, p. 6044-6055 12 p.Research output: Contribution to journal › Article › peer-review
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Expired Epinephrine Maintains Chemical Concentration and Sterility
Weir, W. B., Fred, L. Y., Pike, M., Rubakhin, S. S., Ludwig, T. J., Shar, A. M., Zhu, L., Frederick, A., Uzoaru, I., Wang, L. & Sweedler, J. V., Jul 4 2018, In: Prehospital Emergency Care. 22, 4, p. 414-418 5 p.Research output: Contribution to journal › Article › peer-review
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Exploring Exercise- and Context-Induced Peptide Changes in Mice by Quantitative Mass Spectrometry
Dowd, S. E., Mustroph, M. L., Romanova, E. V., Southey, B. R., Pinardo, H., Rhodes, J. S. & Sweedler, J. V., Oct 24 2018, In: ACS Omega. 3, 10, p. 13817-13827 11 p.Research output: Contribution to journal › Article › peer-review
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Exploring the Sea Urchin Neuropeptide Landscape by Mass Spectrometry
Monroe, E. B., Annangudi, S. P., Wadhams, A. A., Richmond, T. A., Yang, N., Southey, B. R., Romanova, E. V., Schoofs, L., Baggerman, G. & Sweedler, J. V., May 1 2018, In: Journal of the American Society for Mass Spectrometry. 29, 5, p. 923-934 12 p.Research output: Contribution to journal › Article › peer-review
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First survey and functional annotation of prohormone and convertase genes in the pig
Porter, K. I., Southey, B. R., Sweedler, J. V. & Rodriguez-Zas, S. L., Nov 15 2012, In: BMC genomics. 13, 1, 582.Research output: Contribution to journal › Article › peer-review
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Functional Peptidomics: Stimulus- and Time-of-Day-Specific Peptide Release in the Mammalian Circadian Clock
Atkins, N., Ren, S., Hatcher, N., Burgoon, P. W., Mitchell, J. W., Sweedler, J. V. & Gillette, M. U., Aug 15 2018, In: ACS Chemical Neuroscience. 9, 8, p. 2001-2008 8 p.Research output: Contribution to journal › Article › peer-review
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Gene network dysregulation in the trigeminal ganglia and nucleus accumbens of a model of chronic migraine-associated hyperalgesia
Jeong, H., Moye, L. S., Southey, B. R., Hernandez, A. G., Dripps, I., Romanova, E. V., Rubakhin, S. S., Sweedler, J. V., Pradhan, A. A. & Rodriguez-Zas, S. L., Dec 18 2018, In: Frontiers in Systems Neuroscience. 12, 63.Research output: Contribution to journal › Article › peer-review
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Glial D-serine gates NMDA receptors at excitatory synapses in prefrontal cortex
Fossat, P., Turpin, F. R., Sacchi, S., Dulong, J., Shi, T., Rivet, J. M., Sweedler, J. V., Pollegioni, L., Millan, M. J., Oliet, S. H. R. & Mothet, J. P., Mar 2012, In: Cerebral Cortex. 22, 3, p. 595-606 12 p.Research output: Contribution to journal › Article › peer-review
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Identification of prohormones and pituitary neuropeptides in the African cichlid, Astatotilapia burtoni
Hu, C. K., Southey, B. R., Romanova, E. V., Maruska, K. P., Sweedler, J. V. & Fernald, R. D., Aug 19 2016, In: BMC genomics. 17, 1, 660.Research output: Contribution to journal › Article › peer-review
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Interrogation of spatial metabolome of Ginkgo biloba with high-resolution matrix-assisted laser desorption/ionization and laser desorption/ionization mass spectrometry imaging
Li, B., Neumann, E. K., Ge, J., Gao, W., Yang, H., Li, P. & Sweedler, J. V., Nov 2018, In: Plant Cell and Environment. 41, 11, p. 2693-2703 11 p.Research output: Contribution to journal › Article › peer-review
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Label-free quantitation of peptide release from neurons in a microfluidic device with mass spectrometry imaging
Zhong, M., Lee, C. Y., Croushore, C. A. & Sweedler, J. V., May 8 2012, In: Lab on a chip. 12, 11, p. 2037-2045 9 p.Research output: Contribution to journal › Article › peer-review
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Lipid Analysis of 30 000 Individual Rodent Cerebellar Cells Using High-Resolution Mass Spectrometry
Neumann, E. K., Ellis, J. F., Triplett, A. E., Rubakhin, S. S. & Sweedler, J. V., Jan 1 2019, In: Analytical Chemistry.Research output: Contribution to journal › Article › peer-review
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Lipid Heterogeneity between Astrocytes and Neurons Revealed by Single-Cell MALDI-MS Combined with Immunocytochemical Classification
Neumann, E. K., Comi, T. J., Rubakhin, S. S. & Sweedler, J. V., Apr 23 2019, In: Angewandte Chemie - International Edition. 58, 18, p. 5910-5914 5 p.Research output: Contribution to journal › Article › peer-review
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Mass spectrometry imaging and identification of peptides associated with cephalic ganglia regeneration in Schmidtea mediterranea
Ong, T. H., Romanova, E. V., Roberts-Galbraith, R. H., Yang, N., Zimmerman, T. A., Collins, J. J., Lee, J. E., Kelleher, N. L., Newmark, P. A. & Sweedler, J. V., Apr 8 2016, In: Journal of Biological Chemistry. 291, 15, p. 8109-8120 12 p.Research output: Contribution to journal › Article › peer-review
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Mechanical tension modulates local and global vesicle dynamics in neurons
Ahmed, W. W., Li, T. C., Rubakhin, S. S., Chiba, A., Sweedler, J. V. & Saif, T. A., Jun 2012, In: Cellular and Molecular Bioengineering. 5, 2, p. 155-164 10 p.Research output: Contribution to journal › Article › peer-review
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Metal-assisted polyatomic SIMS and laser desorption/ionization for enhanced small molecule imaging of bacterial biofilms
Dunham, S. J. B., Comi, T. J., Ko, K., Li, B., Baig, N. F., Morales-Soto, N., Shrout, J. D., Bohn, P. W. & Sweedler, J. V., Jun 1 2016, In: Biointerphases. 11, 2, 02A325.Research output: Contribution to journal › Article › peer-review
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Microfluidic device for the selective chemical stimulation of neurons and characterization of peptide release with mass spectrometry
Croushore, C. A., Supharoek, S. A., Lee, C. Y., Jakmunee, J. & Sweedler, J. V., Nov 6 2012, In: Analytical Chemistry. 84, 21, p. 9446-9452 7 p.Research output: Contribution to journal › Article › peer-review
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Molecular and Physiological Characterization of a Receptor for d -Amino Acid-Containing Neuropeptides
Checco, J. W., Zhang, G., Yuan, W. D., Yu, K., Yin, S. Y., Roberts-Galbraith, R. H., Yau, P. M., Romanova, E. V., Jing, J. & Sweedler, J. V., May 18 2018, In: ACS chemical biology. 13, 5, p. 1343-1352 10 p.Research output: Contribution to journal › Article › peer-review
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Multidimensional Top-Down Proteomics of Brain-Region-Specific Mouse Brain Proteoforms Responsive to Cocaine and Estradiol
Park, H. M., Satta, R., Davis, R. G., Goo, Y. A., Leduc, R. D., Fellers, R. T., Greer, J. B., Romanova, E. V., Rubakhin, S. S., Tai, R., Thomas, P. M., Sweedler, J. V., Kelleher, N. L., Patrie, S. M. & Lasek, A. W., Nov 1 2019, In: Journal of Proteome Research. 18, 11, p. 3999-4012 14 p.Research output: Contribution to journal › Article › peer-review
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Multimodal Chemical Analysis of the Brain by High Mass Resolution Mass Spectrometry and Infrared Spectroscopic Imaging
Neumann, E. K., Comi, T. J., Spegazzini, N., Mitchell, J. W., Rubakhin, S. S., Gillette, M. U., Bhargava, R. & Sweedler, J. V., Oct 2 2018, In: Analytical Chemistry. 90, 19, p. 11572-11580 9 p.Research output: Contribution to journal › Article › peer-review
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Neuropeptidomics of the Rat Habenular Nuclei
Yang, N., Anapindi, K. D. B., Rubakhin, S. S., Wei, P., Yu, Q., Li, L., Kenny, P. J. & Sweedler, J. V., Apr 6 2018, In: Journal of Proteome Research. 17, 4, p. 1463-1473 11 p.Research output: Contribution to journal › Article › peer-review
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Newly Identified Aplysia SPTR-Gene Family-Derived Peptides: Localization and Function
Zhang, G., Yuan, W. D., Vilim, F. S., Romanova, E. V., Yu, K., Yin, S. Y., Le, Z. W., Xue, Y. Y., Chen, T. T., Chen, G. K., Chen, S. A., Cropper, E. C., Sweedler, J. V., Weiss, K. R. & Jing, J., Aug 15 2018, In: ACS Chemical Neuroscience. 9, 8, p. 2041-2053 13 p.Research output: Contribution to journal › Article › peer-review
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On-Tissue Derivatization via Electrospray Deposition for Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry Imaging of Endogenous Fatty Acids in Rat Brain Tissues
Wu, Q., Comi, T. J., Li, B., Rubakhin, S. S. & Sweedler, J. V., Jun 7 2016, In: Analytical Chemistry. 88, 11, p. 5988-5995 8 p.Research output: Contribution to journal › Article › peer-review
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Opioid-Induced Hyperalgesia Is Associated with Dysregulation of Circadian Rhythm and Adaptive Immune Pathways in the Mouse Trigeminal Ganglia and Nucleus Accumbens
Zhang, P., Moye, L. S., Southey, B. R., Dripps, I., Sweedler, J. V., Pradhan, A. & Rodriguez-Zas, S. L., Dec 1 2019, In: Molecular Neurobiology. 56, 12, p. 7929-7949 21 p.Research output: Contribution to journal › Article › peer-review
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Optically Guided Single Cell Mass Spectrometry of Rat Dorsal Root Ganglia to Profile Lipids, Peptides and Proteins
Do, T. D., Ellis, J. F., Neumann, E. K., Comi, T. J., Tillmaand, E. G., Lenhart, A. E., Rubakhin, S. S. & Sweedler, J. V., May 22 2018, In: ChemPhysChem. 19, 10, p. 1180-1191 12 p.Research output: Contribution to journal › Article › peer-review
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PACAP and other neuropeptide targets link chronic migraine and opioid-induced hyperalgesia in mouse models
Anapindi, K. D. B., Yang, N., Romanova, E. V., Rubakhin, S. S., Tipton, A., Dripps, I., Sheets, Z., Sweedler, J. V. & Pradhan, A. A., 2019, In: Molecular and Cellular Proteomics. 18, 12, p. 2447-2458 12 p.Research output: Contribution to journal › Article › peer-review
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Peptide identifications and false discovery rates using different mass spectrometry platforms
Anapindi, K. D. B., Romanova, E. V., Southey, B. R. & Sweedler, J. V., May 15 2018, In: Talanta. 182, p. 456-463 8 p.Research output: Contribution to journal › Article › peer-review
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Peptidomic analyses of mouse astrocytic cell lines and rat primary cultured astrocytes
Yin, P., Knolhoff, A. M., Rosenberg, H. J., Millet, L. J., Gillette, M. U. & Sweedler, J. V., Aug 3 2012, In: Journal of Proteome Research. 11, 8, p. 3965-3973 9 p.Research output: Contribution to journal › Article › peer-review
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Quantitative SIMS Imaging of Agar-Based Microbial Communities
Dunham, S. J. B., Ellis, J. F., Baig, N. F., Morales-Soto, N., Cao, T., Shrout, J. D., Bohn, P. W. & Sweedler, J. V., May 1 2018, In: Analytical Chemistry. 90, 9, p. 5654-5663 10 p.Research output: Contribution to journal › Article › peer-review
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Rapid Screening of Lanthipeptide Analogs via In-Colony Removal of Leader Peptides in Escherichia coli
Si, T., Tian, Q., Min, Y., Zhang, L., Sweedler, J. V., Van Der Donk, W. A. & Zhao, H., Sep 26 2018, In: Journal of the American Chemical Society. 140, 38, p. 11884-11888 5 p.Research output: Contribution to journal › Article › peer-review
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Relative quantitation of neuropeptides over a thousand-fold concentration range
Hou, X., Xie, F. & Sweedler, J. V., Dec 2012, In: Journal of the American Society for Mass Spectrometry. 23, 12, p. 2083-2093 11 p.Research output: Contribution to journal › Article › peer-review