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2011

A microfabricated electrical differential counter for the selective enumeration of CD4+ T lymphocytes

Watkins, N. N., Sridhar, S., Cheng, X., Chen, G. D., Toner, M., Rodriguez, W. & Bashir, R., Apr 21 2011, In : Lab on a chip. 11, 8, p. 1437-1447 11 p.

Research output: Contribution to journalArticle

T-cells
T-Lymphocytes
Leukocytes
Cell Count
Immobilized Antibodies

Control of nanoscale environment to improve stability of immobilized proteins on diamond surfaces

Radadia, A. D., Stavis, C. J., Carr, R., Zeng, H., King, W. P., Carlisle, J. A., Aksimentiev, A., Hamers, R. J. & Bashir, R., Mar 22 2011, In : Advanced Functional Materials. 21, 6, p. 1040-1050 11 p.

Research output: Contribution to journalArticle

Immobilized Proteins
Diamond
Diamonds
diamonds
proteins

Delving into BioMEMS

Bashir, R., Khademhosseini, A. & Sia, S., Nov 1 2011, In : IEEE Pulse. 2, 6, 1 p., 6088916.

Research output: Contribution to journalEditorial

BioMEMS
Micro-Electrical-Mechanical Systems
Microtechnology
Drug Delivery Systems
Tissue Engineering

Electrical detection of dsDNA and polymerase chain reaction amplification

Salm, E., Liu, Y. S., Marchwiany, D., Morisette, D., He, Y., Bhunia, A. K. & Bashir, R., Dec 2011, In : Biomedical microdevices. 13, 6, p. 973-982 10 p.

Research output: Contribution to journalArticle

Polymerase chain reaction
Amplification
DNA
Polymerase Chain Reaction
Deionized water

Erratum: Electrical detection of dsDNA and polymerase chain reaction amplification (Biomedical Microdevices DOI: 10.1007/s10544-011-9567-x)

Salm, E., Liu, Y. S., Marchwiany, D., Morisette, D., He, Y., Razouk, L., Bhunia, A. K. & Bashir, R., Dec 1 2011, In : Biomedical microdevices. 13, 6, 1 p.

Research output: Contribution to journalComment/debate

Polymerase chain reaction
Amplification
Polymerase Chain Reaction

Examining cellular interactions in 3-dimensional microenvironments

Zorlutuna, P., Jeong, J. H., Kong, H. & Bashir, R., 2011, 24th European Conference on Biomaterials - Annual Conference of the European Society for Biomaterials, ESB 2011.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

High-k dielectric Al2O3 nanowire and nanoplate field effect sensors for improved pH sensing

Reddy, B., Dorvel, B. R., Go, J., Nair, P. R., Elibol, O. H., Credo, G. M., Daniels, J. S., Chow, E. K. C., Su, X., Varma, M., Alam, M. A. & Bashir, R., Apr 1 2011, In : Biomedical microdevices. 13, 2, p. 335-344 10 p.

Research output: Contribution to journalArticle

Nanowires
Gate dielectrics
Field effect transistors
Equipment and Supplies
Sensors

How far cardiac cells can see each other mechanically

Tang, X., Bajaj, P., Bashir, R. & Saif, T. A., Jul 7 2011, In : Soft Matter. 7, 13, p. 6151-6158 8 p.

Research output: Contribution to journalArticle

Substrates
cells
Stiffness
Continuum mechanics
Tissue

Independent control stiffness and permeability of a cell-encapsulating hydrogel; integration of bio-inspired material chemistry and microfabrication

Jeong, J. H., Chan, V., Cha, C., Zorlutuna, P., Bashir, R. & Kong, H. J., Jan 1 2011, Materials Engineering and Sciences Division - Core Programming Topic at the 2011 AIChE Annual Meeting. AIChE, Vol. 2. 1 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

permeability
Hydrogel
Microfabrication
Hydrogels
chemistry

Inverse-extraordianry optoconductance in Ti/Au/GaAs hybrid structures

Newaz, A. K. M., Chang, W. J., Wallace, K. D., Wickline, S. A., Bashir, R., Gilbertson, A. M., Cohen, L. F., Edge, L. C. & Solin, S. A., Dec 1 2011, Physics of Semiconductors - 30th International Conference on the Physics of Semiconductors, ICPS-30. p. 973-974 2 p. (AIP Conference Proceedings; vol. 1399).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

hybrid structures
metals
luminous intensity
photons

Label-free imaging of cell attachment with photonic crystal enhanced microscopy

Lidstone, E. A., Chaudhery, V., Kohl, A., Chan, V., Wolf-Jensen, T., Schook, L. B., Bashir, R. & Cunningham, B. T., Sep 21 2011, In : Analyst. 136, 18, p. 3608-3615 8 p.

Research output: Contribution to journalArticle

Optics and Photonics
Photonic crystals
Labels
microscopy
Microscopy

Label-free intracellular transport measured by spatial light interference microscopy

Wang, Z., Millet, L., Chan, V., Ding, H., Gillette, M. U., Bashir, R. & Popescu, G., Feb 1 2011, In : Journal of biomedical optics. 16, 2, 026019.

Research output: Contribution to journalArticle

Light interference
organelles
Labels
Microscopic examination
microscopy

Lipid bilayer coated Al2O3 nanopore sensors: Towards a hybrid biological solid-state nanopore

Venkatesan, B. M., Polans, J., Comer, J., Sridhar, S., Wendell, D., Aksimentiev, A. & Bashir, R., Aug 1 2011, In : Biomedical microdevices. 13, 4, p. 671-682 12 p.

Research output: Contribution to journalArticle

Nanopores
Lipid bilayers
Lipid Bilayers
Sensors
Ion Channels

MEMS mass sensors with uniform sensitivity for monitoring cellular apoptosis

Park, K., Millet, L., Kim, N., Li, H., Hsia, K. J., Aluru, N. R. & Bashir, R., Sep 1 2011, 2011 16th International Solid-State Sensors, Actuators and Microsystems Conference, TRANSDUCERS'11. p. 759-762 4 p. 5969307. (2011 16th International Solid-State Sensors, Actuators and Microsystems Conference, TRANSDUCERS'11).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Cell death
MEMS
Monitoring
Sensors
Cell growth

On a chip

Watkins, N., Irimia, D., Toner, M. & Bashir, R., Nov 1 2011, In : IEEE Pulse. 2, 6, p. 19-27 9 p., 6088930.

Research output: Contribution to journalArticle

Emergency rooms
Ambulances
MEMS
Health

Optical measurement of cycle-dependent cell growth

Mir, M., Wang, Z., Shen, Z., Bednarz, M., Bashir, R., Golding, I., Prasanth, S. G. & Popescu, G., Aug 9 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 32, p. 13124-13129 6 p.

Research output: Contribution to journalArticle

Cell Cycle
Growth
Interference Microscopy
Cell Size
Light

Pattern analysis and spatial distribution of neurons in culture

Millet, L. J., Collens, M. B., Perry, G. L. W. & Bashir, R., Dec 1 2011, In : Integrative Biology. 3, 12, p. 1167-1178 12 p.

Research output: Contribution to journalArticle

Spatial Analysis
Spatial distribution
Neurons
Neurology
Dendrites

Patterning the differentiation of C2C12 skeletal myoblasts

Bajaj, P., Reddy, B., Millet, L., Wei, C., Zorlutuna, P., Bao, G. & Bashir, R., Sep 1 2011, In : Integrative Biology. 3, 9, p. 897-909 13 p.

Research output: Contribution to journalArticle

Skeletal Myoblasts
Fusion reactions
Muscle
Substrates
Cells

Separating beads and cells in multi-channel microfluidic devices using dielectrophoresis and laminar flow

Millet, L. J., Park, K., Watkins, N. N., Jimmy Hsia, K. & Bashir, R., Feb 2011, In : Journal of Visualized Experiments. 48, e2545.

Research output: Contribution to journalArticle

Lab-On-A-Chip Devices
Electrophoresis
Laminar flow
Microfluidics
Fluidics

Separating beads and cells in multi-channel microfluidic devices using dielectrophoresis and laminar flow.

Millet, L. J., Park, K., Watkins, N. N., Hsia, K. J. & Bashir, R., Dec 1 2011, In : Journal of visualized experiments : JoVE. 48

Research output: Contribution to journalArticle

Lab-On-A-Chip Devices
Electrophoresis
Laminar flow
Microfluidics
Fluidics

Silicon field effect transistors as dual-use sensor-heater hybrids

Reddy, B., Elibol, O. H., Nair, P. R., Dorvel, B. R., Butler, F., Ahsan, Z., Bergstrom, D. E., Alam, M. A. & Bashir, R., Feb 1 2011, In : Analytical chemistry. 83, 3, p. 888-895 8 p.

Research output: Contribution to journalArticle

Silicon
Field effect transistors
Transistors
Sensors
Dielectric heating

Stereolithography-based hydrogel microenvironments to examine cellular interactions

Zorlutuna, P., Jeong, J. H., Kong, H. & Bashir, R., Oct 7 2011, In : Advanced Functional Materials. 21, 19, p. 3642-3651 10 p.

Research output: Contribution to journalArticle

Stereolithography
Hydrogel
Hydrogels
Neurons
lithography

Surface functionalization of thin-film diamond for highly stable and selective biological interfaces

Stavis, C., Clare, T. L., Butler, J. E., Radadia, A. D., Carr, R., Zeng, H., King, W. P., Carlisle, J. A., Aksimentiev, A., Bashir, R. & Hamers, R. J., Jan 18 2011, In : Proceedings of the National Academy of Sciences of the United States of America. 108, 3, p. 983-988 6 p.

Research output: Contribution to journalReview article

Diamond
Photoelectron Spectroscopy
Carbon
Ethylene Glycol
Biological Phenomena

Surface immobilizable chelator for label-free electrical detection of pyrophosphate

Liu, D. J., Credo, G. M., Su, X., Wu, K., Lim, H. C., Elibol, O. H., Bashir, R. & Varma, M., Aug 7 2011, In : Chemical Communications. 47, 29, p. 8310-8312 3 p.

Research output: Contribution to journalArticle

Chelating Agents
Labels
Silicon
Field effect transistors
Sensors
2012

3-D biofabrication using stereolithography for biology and medicine

Bajaj, P., Chan, V., Jeong, J. H., Zorlutuna, P., Kong, H. & Bashir, R., Dec 14 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2012. p. 6805-6808 4 p. 6347557. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Stereolithography
Medicine
Tissue Engineering
Electrophoresis
Tissue engineering
Stereolithography
Medicine
Tissue Engineering
Electrophoresis
Tissue engineering

Bionanoscience in health and medicine

Bashir, R., May 1 2012, In : Proceedings of the IEEE. 100, 5, p. 1015-1016 2 p., 6183039.

Research output: Contribution to journalArticle

Nanotechnology
Medicine
Health
Biological systems
DNA

Characterization of mass and swelling of hydrogel microstructures using MEMS resonant mass sensor arrays

Millet, L. J., Corbin, E. A., Free, R., Park, K., Kong, H., King, W. P. & Bashir, R., Aug 20 2012, In : Small. 8, 16, p. 2555-2562 8 p.

Research output: Contribution to journalArticle

Hydrogels
Hydrogel
Sensor arrays
MEMS
Swelling

Coupled heterogeneous nanowire-nanoplate planar transistor sensors for giant (>10 V/pH) nernst response

Go, J., Nair, P. R., Reddy, B., Dorvel, B., Bashir, R. & Alam, M. A., Jul 24 2012, In : ACS Nano. 6, 7, p. 5972-5979 8 p.

Research output: Contribution to journalArticle

Nanowires
Transistors
nanowires
transistors
sensors

Development of miniaturized walking biological machines

Chan, V., Park, K., Collens, M. B., Kong, H., Saif, T. A. & Bashir, R., Dec 14 2012, In : Scientific reports. 2, 857.

Research output: Contribution to journalArticle

Locomotion
Cardiac Myocytes
Walking
Leg
Hydrogels

Electrical flow metering of blood for point-of-care diagnostics

Watkins, N., Hassan, U., Rodriguez, W. & Bashir, R., Dec 14 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2012. p. 3255-3257 3 p. 6346659. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Point-of-Care Systems
Blood
Microfluidics
Microelectrodes
Leukocyte Count

Graphene nanopores for nucleic acid analysis

Shim, J., Solovyeva, V., Estrada, D., Banerjee, S., Rivera, J., Pop, E. & Bashir, R., 2012, 2012 12th IEEE International Conference on Nanotechnology, NANO 2012. 6322237

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nanopores
Graphite
Nucleic acids
nucleic acids
Graphene

Hydrodynamic loading and viscous damping of patterned perforations on microfabricated resonant structures

Park, K., Shim, J., Solovyeva, V., Corbin, E., Banerjee, S. & Bashir, R., Apr 9 2012, In : Applied Physics Letters. 100, 15, 154107.

Research output: Contribution to journalArticle

viscous damping
perforation
damping
hydrodynamics
penetration

Improved graphene growth and fluorination on Cu with clean transfer to surfaces

Wood, J. D., Schmucker, S. W., Haasch, R. T., Doidge, G. P., Nienhaus, L., Damhorst, G. L., Lyons, A. S., Gruebele, M., Bashir, R., Pop, E. & Lyding, J. W., Nov 22 2012, 2012 12th IEEE International Conference on Nanotechnology, NANO 2012. 6322101. (Proceedings of the IEEE Conference on Nanotechnology).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Fluorination
fluorination
Graphite
Graphene
graphene

Integrated 'lab-on-a-transistor': With droplets-in-air for parallel nanoliter reactions

Salm, E., Duarte, C., Jokilaakso, N. & Bashir, R., Jan 1 2012, Proceedings of the 16th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2012. Chemical and Biological Microsystems Society, p. 1945-1947 3 p. (Proceedings of the 16th International Conference on Miniaturized Systems for Chemistry and Life Sciences, MicroTAS 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transistors
Air
Heating
Thermal cycling
Sensors

Integrated lab on chip for detection of cells and micro-organisms

Salm, E., Duarte, C. & Bashir, R., Dec 1 2012, 2012 IEEE Photonics Conference, IPC 2012. p. 145-146 2 p. 6358531. (2012 IEEE Photonics Conference, IPC 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Transistors
Field effect transistors
Lab-on-a-chip
Hybrid sensors
Heating

Label-free electrical detection of pyrophosphate generated from DNA polymerase reactions on field-effect devices

Credo, G. M., Su, X., Wu, K., Elibol, O. H., Liu, D. J., Reddy, B., Tsai, T. W., Dorvel, B. R., Daniels, J. S., Bashir, R. & Varma, M., Mar 21 2012, In : Analyst. 137, 6, p. 1351-1362 12 p.

Research output: Contribution to journalArticle

Labels
DNA
Chelating Agents
sensor
Equipment and Supplies

"Living" microvascular stamp for patterning of functional neovessels; Orchestrated control of matrix property and geometry

Jeong, J. H., Chan, V., Cha, C., Zorlutuna, P., Dyck, C., Hsia, K. J., Bashir, R. & Kong, H., Jan 3 2012, In : Advanced Materials. 24, 1, p. 58-63 6 p.

Research output: Contribution to journalArticle

Angiogenesis Inducing Agents
Hydrogels
Geometry
Hydrogel

Mechanical communication between cardiac cell leads to synchrony in beating

Tang, X., Bajaj, P., Bashir, R. & Saif, T., Dec 1 2012, ASME 2012 Summer Bioengineering Conference, SBC 2012. p. 333-334 2 p. (ASME 2012 Summer Bioengineering Conference, SBC 2012).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Elastic moduli
Stiffness
Communication

Microfluidic multifunctional probe array dielectrophoretic force spectroscopy with wide loading rates

Park, I. S., Eom, K., Son, J., Chang, W. J., Park, K., Kwon, T., Yoon, D. S., Bashir, R. & Lee, S. W., Oct 23 2012, In : ACS Nano. 6, 10, p. 8665-8673 9 p.

Research output: Contribution to journalArticle

loading rate
Molecular interactions
Microfluidics
Spectroscopy
Molecular mechanics

Multi-material bio-fabrication of hydrogel cantilevers and actuators with stereolithography

Chan, V., Jeong, J. H., Bajaj, P., Collens, M., Saif, T., Kong, H. & Bashir, R., Jan 7 2012, In : Lab on a chip. 12, 1, p. 88-98 11 p.

Research output: Contribution to journalArticle

Stereolithography
Hydrogel
Hydrogels
Polyethylene glycols
Actuators

Nanopore sensors for DNA analysis

Solovyeva, V., Venkatesan, B. M., Shim, J., Banerjee, S., Rivera, J. & Bashir, R., Jul 23 2012, Micro- and Nanotechnology Sensors, Systems, and Applications IV. 83730O. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 8373).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nanopore
Nanopores
DNA
deoxyribonucleic acid
solid state

Resonant MEMS mass sensors for measurement of microdroplet evaporation

Park, K., Kim, N., Morisette, D. T., Aluru, N. R. & Bashir, R., Apr 5 2012, In : Journal of Microelectromechanical Systems. 21, 3, p. 702-711 10 p., 6176181.

Research output: Contribution to journalArticle

MEMS
Evaporation
Sensors
Dimethyl sulfoxide
Vaporization

Silicon nanowires with high-k hafnium oxide dielectrics for sensitive detection of small nucleic acid oligomers

Dorvel, B. R., Reddy, B., Go, J., Duarte Guevara, C., Salm, E., Alam, M. A. & Bashir, R., Jul 24 2012, In : ACS Nano. 6, 7, p. 6150-6164 15 p.

Research output: Contribution to journalArticle

Hafnium oxides
hafnium oxides
Nucleic acids
nucleic acids
Silicon

Stacked graphene-Al 2O 3 nanopore sensors for sensitive detection of DNA and DNA-protein complexes

Venkatesan, B. M., Estrada, D., Banerjee, S., Jin, X., Dorgan, V. E., Bae, M. H., Aluru, N. R., Pop, E. & Bashir, R., Jan 24 2012, In : ACS Nano. 6, 1, p. 441-450 10 p.

Research output: Contribution to journalArticle

Nanopores
Graphite
Graphene
graphene
DNA
2013

3D fabrication of biological machines

Chan, V., Kong, H. J. & Bashir, R., Oct 31 2013, 2013 35th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2013. p. 314-317 4 p. 6609500. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Biomaterials
Cells
Fabrication
Biocompatible Materials
Cell Count

A liposome-based ion release impedance sensor for biological detection

Damhorst, G. L., Smith, C. E., Salm, E. M., Sobieraj, M. M., Ni, H., Kong, H. & Bashir, R., Oct 1 2013, In : Biomedical microdevices. 15, 5, p. 895-905 11 p.

Research output: Contribution to journalArticle

Liposomes
Electric Impedance
Biomolecules
Pathogens
Ions

Biomedical micro and nanotechnology: From lab-on-chip to building with cells

Hassan, U., Bajaj, P., Salm, E., Damhorst, G. & Bashir, R., Dec 16 2013, 71st Device Research Conference, DRC 2013 - Conference Digest. 1 p. 6633767. (Device Research Conference - Conference Digest, DRC).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nanotechnology

Biomedical micro and nanotechnology: From lab-on-chip to building systems with cells

Hassan, U., Bajaj, P., Damhorst, G. & Bashir, R., Dec 1 2013, 2013 Transducers and Eurosensors XXVII: The 17th International Conference on Solid-State Sensors, Actuators and Microsystems, TRANSDUCERS and EUROSENSORS 2013. p. 2539-2543 5 p. 6627323. (2013 Transducers and Eurosensors XXVII: The 17th International Conference on Solid-State Sensors, Actuators and Microsystems, TRANSDUCERS and EUROSENSORS 2013).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nanotechnology
T-cells
Nucleic acids
Pathogens
Tissue engineering